int main(int argc, char * argv[])
{
   int status = 0;

   int rank=0;
   PV_Init* initObj = new PV_Init(&argc, &argv, false/*allowUnrecognizedArguments*/);

   PV_Arguments * arguments = initObj->getArguments();
   if (arguments->getParamsFile() != NULL) {
      if (rank==0) {
         fprintf(stderr, "%s does not take -p as an option.  Instead the necessary params file is hard-coded.\n", argv[0]);
      }
      MPI_Barrier(MPI_COMM_WORLD);
      exit(EXIT_FAILURE);
   }

   arguments->setParamsFile("input/test_border_activity.params");

   initObj->initialize();
   HyPerCol * hc = new HyPerCol("column", initObj);

   const char * imageLayerName = "test_border_activity image";
   const char * retinaLayerName = "test_border_activity retina";
   const char * l1LayerName = "test_border_activity layer";

   Image * image   = new Image(imageLayerName, hc); assert(image);
   Retina * retina = new Retina(retinaLayerName, hc);           assert(retina);
   ANNLayer * l1     = new ANNLayer(l1LayerName, hc);           assert(l1);

   HyPerConn * conn1 = new HyPerConn("test_border_activity connection 1", hc);
   assert(conn1);
   HyPerConn * conn2 = new HyPerConn("test_border_activity connection 2", hc);
   assert(conn2);
   
#ifdef DEBUG_OUTPUT
   PointProbe * p1 = new PointProbe( 0,  0,  0, "L1 (0,0,0):");
   PointProbe * p2 = new PointProbe(32, 32, 32, "L1 (32,32,0):");
   l1->insertProbe(p1);
   l1->insertProbe(p2);
#endif

   // run the simulation
   hc->run();

   status = check_activity(l1);

   delete hc;

   delete initObj;

   return status;
}
Пример #2
0
int main(int argc, char * argv[]) {
   const char * paramfile1 = "input/RandStateSystemTest1.params";
   const char * paramfile2 = "input/RandStateSystemTest2.params";

   int rank=0;
   PV_Init* initObj = new PV_Init(&argc, &argv, false/*allowUnrecognizedArguments*/);
   MPI_Comm_rank(MPI_COMM_WORLD, &rank); /* Can't use `initObj->getComm()->communicator()` because initObj->initialize hasn't been called. */

   PV_Arguments * arguments = initObj->getArguments();
   if (arguments->getParamsFile() != NULL) {
      if (rank==0) {
         fprintf(stderr, "%s does not take -p as an option.  Instead the necessary params files are hard-coded.\n", arguments->getProgramName());
      }
      MPI_Barrier(MPI_COMM_WORLD);
      exit(EXIT_FAILURE);
   }

   arguments->setParamsFile(paramfile1);
   int status1 = rebuildandrun(initObj, NULL, NULL, NULL, 0);
   if (status1 != PV_SUCCESS) {
      fprintf(stderr, "%s failed on param file %s with return code %d.\n", arguments->getProgramName(), paramfile1, status1);
      return EXIT_FAILURE;
   }

   arguments->setParamsFile(paramfile2);
   int status2 = rebuildandrun(initObj, NULL, &customexit, NULL);
   if (status2 != PV_SUCCESS) {
      fprintf(stderr, "%s failed on param file %s.\n", arguments->getProgramName(), paramfile2);
   }
   int status = status1==PV_SUCCESS && status2==PV_SUCCESS ? EXIT_SUCCESS : EXIT_FAILURE;

#ifdef PV_USE_MPI
   if (status == EXIT_SUCCESS) {
      printf("Test complete.  %s passed on process rank %d.\n", arguments->getProgramName(), rank);
   }
   else {
      fprintf(stderr, "Test complete.  %s FAILED on process rank %d.\n", arguments->getProgramName(), rank);
   }
#else
   if (status == EXIT_SUCCESS) {
      printf("Test complete.  %s passed.\n", arguments->getProgramName());
   }
   else {
      fprintf(stderr, "Test complete.  %s FAILED.\n", arguments->getProgramName());
   }
#endif // PV_USE_MPI

   delete initObj;

   return status;
}
Пример #3
0
int testioparams(PV_Init* initObj, int rank) {
   PV_Arguments * arguments = initObj->getArguments();
   arguments->resetState();
   // Ignore -r and -c switches
   arguments->setRestartFlag(false);
   arguments->setCheckpointReadDir(NULL);
   initObj->initialize();
   HyPerCol * hc = build(initObj, NULL, 0);
   if (hc == NULL) {
      fprintf(stderr, "testioparams error: unable to build HyPerCol.\n");
      exit(EXIT_FAILURE);
   }
   int status = hc->run(); // Needed to generate pv.params file
   if (status != PV_SUCCESS) {
      fprintf(stderr, "testioparams error: run to generate pv.params file failed.\n");
      exit(EXIT_FAILURE);
   }
   const char * paramsfile = hc->getPrintParamsFilename();
   std::string paramsfileString = paramsfile;
   if (paramsfile[0]!='/') {
      const char * outputPath = hc->getOutputPath();
      paramsfileString.insert(0, "/");
      paramsfileString.insert(0, outputPath);
   }
   delete hc;

   arguments->setParamsFile(paramsfileString.c_str());
   if (rank==0) {
      printf("%s --testioparams running PetaVision with arguments\n", arguments->getProgramName());
      arguments->printState();
   }
   status = rebuildandrun(initObj, NULL, &assertAllZeroes, NULL, 0);
   return status;
}
int main(int argc, char * argv[]) {
   int status;
   PV_Init * initObj = new PV_Init(&argc, &argv, false/*allowUnrecognizedArguments*/);
   PV_Arguments * arguments = initObj->getArguments();
   if (arguments->getParamsFile()==NULL) {
      arguments->setParamsFile("input/KernelActivationTest-fullData.params");
      status = runKernelActivationTest(initObj);
      if (status==PV_SUCCESS) {
         arguments->setParamsFile("input/KernelActivationTest-maskData.params");
         status = runKernelActivationTest(initObj);
      }
   }
   else {
      status = runKernelActivationTest(initObj);
   }
   delete initObj;
   return status;
}
Пример #5
0
int main(int argc, char * argv[]) {
   PV_Init* initObj = new PV_Init(&argc, &argv, false/*allowUnrecognizedArguments*/);
   int rank = initObj->getWorldRank();

   char const * paramFile1 = "input/DtAdaptController_ANNNormalized.params";
   char const * paramFile2 = "input/DtAdaptController_dtAdaptController.params";
   char const * paramFileCompare = "input/DtAdaptController_Comparison.params";
   int status = PV_SUCCESS;
   if (pv_getopt_str(argc, argv, "-p", NULL, NULL)==0) {
      if (rank==0) {
         fprintf(stderr, "%s should be run without the params file argument, as it uses hard-coded params files.\n", argv[0]);
      }
      MPI_Barrier(MPI_COMM_WORLD);
      exit(EXIT_FAILURE);
   }

   PV_Arguments * arguments = initObj->getArguments();

   arguments->setParamsFile(paramFile1);
   status = rebuildandrun(initObj, NULL, NULL, NULL, 0);
   if( status != PV_SUCCESS ) {
      fprintf(stderr, "%s: rank %d running with params file %s returned error %d.\n", arguments->getProgramName(), rank, paramFile1, status);
      exit(status);
   }

   arguments->setParamsFile(paramFile2);
   status = rebuildandrun(initObj, NULL, NULL, NULL, 0);
   if( status != PV_SUCCESS ) {
      fprintf(stderr, "%s: rank %d running with params file %s returned error %d.\n", arguments->getProgramName(), rank, paramFile2, status);
      exit(status);
   }

   arguments->setParamsFile(paramFileCompare);
   status = rebuildandrun(initObj, NULL, &assertAllZeroes, NULL, 0);
   if( status != PV_SUCCESS ) {
      fprintf(stderr, "%s: rank %d running with params file %s returned error %d.\n", arguments->getProgramName(), rank, paramFileCompare, status);
      exit(status);
   }
   
   delete initObj;
   
   return status==PV_SUCCESS ? EXIT_SUCCESS : EXIT_FAILURE;
}
Пример #6
0
int generate(PV_Init* initObj, int rank) {
   PV_Arguments * arguments = initObj->getArguments();

   // Remove -r and -c
   arguments->setRestartFlag(false);
   arguments->setCheckpointReadDir(NULL);
   if (rank==0) {
      printf("%s --generate running PetaVision with arguments\n", arguments->getProgramName());
      arguments->printState();
   }
   if (rank==0) {
      PV_Stream * emptyinfile = PV_fopen("input/correct.pvp", "w", false/*verifyWrites*/);
      // Data for a CORRECT_PVP_NX-by-CORRECT_PVP_NY layer with CORRECT_PVP_NF features.
      // Sparse activity with no active neurons so file size doesn't change with number of features
      int emptydata[] = {80, 20, 2, CORRECT_PVP_NX, CORRECT_PVP_NY, CORRECT_PVP_NF, 1, 0, 4, 2, 1, 1, CORRECT_PVP_NX, CORRECT_PVP_NY, 0, 0, 0, 1, 0, 0, 0, 0, 0};
      size_t numwritten = PV_fwrite(emptydata, 23, sizeof(int), emptyinfile);
      if (numwritten != 23) {
         fprintf(stderr, "%s error writing placeholder data into input/correct.pvp file.\n", arguments->getProgramName());
      }
      PV_fclose(emptyinfile);
   }
   int status = rebuildandrun(initObj, NULL, &copyCorrectOutput, NULL, 0);
   return status;
}
Пример #7
0
int testrun(PV_Init * initObj, int rank) {
   PV_Arguments * arguments = initObj->getArguments();
   arguments->resetState();
   // Ignore restart flag and checkpoint directory
   arguments->setRestartFlag(false);
   arguments->setCheckpointReadDir(NULL);
   if (rank==0) {
      printf("%s --testrun running PetaVision with arguments\n", arguments->getProgramName());
      arguments->printState();
   }
   int status = rebuildandrun(initObj, NULL, &assertAllZeroes, NULL, 0);
   return status;
}
Пример #8
0
int testcheckpoint(PV_Init * initObj, int rank) {
   PV_Arguments * arguments = initObj->getArguments();
   arguments->resetState();
   // Make sure either restartFlag or checkpointReadDir are set (both cannot be set or PV_Arguments will error out).
   bool hasrestart = (arguments->getRestartFlag() || arguments->getCheckpointReadDir()!=NULL);
   if (!hasrestart) {
      if (rank==0) {
         fprintf(stderr, "%s error: --testcheckpoint requires either the -r or the -c option.\n", arguments->getProgramName());
      }
      MPI_Barrier(MPI_COMM_WORLD);
      exit(EXIT_FAILURE);
   }
   if (rank==0) {
      printf("%s --testcheckpoint running PetaVision with arguments\n", arguments->getProgramName());
      arguments->printState();
   }
   int status = rebuildandrun(initObj, NULL, &assertAllZeroes, NULL, 0);
   return status;
}
int main(int argc, char * argv[]) {
   PV_Init* initObj = new PV_Init(&argc, &argv, false/*allowUnrecognizedArguments*/);
   InterColComm * icComm = new InterColComm(initObj->getArguments());

   PV_Arguments * arguments = initObj->getArguments();
   if (arguments->getParamsFile() != NULL) {
      int rank = icComm->globalCommRank();
      if (rank==0) {
         fprintf(stderr, "%s does not take -p as an option.  Instead the necessary params file is hard-coded.\n", arguments->getProgramName());
      }
      MPI_Barrier(MPI_COMM_WORLD);
      exit(EXIT_FAILURE);
   }

   arguments->setParamsFile("input/TransposeHyPerConnTest.params");

   initObj->initialize();

   // Don't call buildandrun because it will delete hc before returning. (I could use the customexit hook)
   HyPerCol * hc = build(initObj);
   hc->run(); // Weight values are initialized when run calls allocateDataStructures

   int status = PV_SUCCESS;

   HyPerConn * originalMap = NULL;
   TransposeConn * transpose = NULL;
   TransposeConn * transposeOfTranspose = NULL;

   BaseConnection * baseConn;
   baseConn = hc->getConnFromName("Original Map for One to One Test");
   originalMap = dynamic_cast<HyPerConn *>(baseConn);
   //assert(originalMap->usingSharedWeights());
   transpose = dynamic_cast<TransposeConn *>(hc->getConnFromName("Transpose for One to One Test of TransposeConn"));
   transposeOfTranspose = dynamic_cast<TransposeConn *>(hc->getConnFromName("Transpose of Transpose for One to One Test of TransposeConn"));
   status = testTransposeOfTransposeWeights(originalMap, transpose, transposeOfTranspose, "One-to-one case, TransposeConn");

   baseConn = hc->getConnFromName("Original Map for Many to One Test");
   originalMap = dynamic_cast<HyPerConn *>(baseConn);
   //assert(originalMap->usingSharedWeights());
   transpose = dynamic_cast<TransposeConn *>(hc->getConnFromName("Transpose for Many to One Test of TransposeConn"));
   transposeOfTranspose = dynamic_cast<TransposeConn *>(hc->getConnFromName("Transpose of Transpose for Many to One Test of TransposeConn"));
   status = testTransposeOfTransposeWeights(originalMap, transpose, transposeOfTranspose, "Many-to-one case, TransposeConn");

   baseConn = hc->getConnFromName("Original Map for One to Many Test");
   originalMap = dynamic_cast<HyPerConn *>(baseConn);
   //assert(originalMap->usingSharedWeights());
   transpose = dynamic_cast<TransposeConn *>(hc->getConnFromName("Transpose for One to Many Test of TransposeConn"));
   transposeOfTranspose = dynamic_cast<TransposeConn *>(hc->getConnFromName("Transpose of Transpose for One to Many Test of TransposeConn"));
   status = testTransposeOfTransposeWeights(originalMap, transpose, transposeOfTranspose, "One-to-many case, TransposeConn");

   baseConn = hc->getConnFromName("Original Map for One to One Test");
   originalMap = dynamic_cast<HyPerConn *>(baseConn);
   //assert(originalMap->usingSharedWeights());
   transpose = dynamic_cast<TransposeConn *>(hc->getConnFromName("Transpose for One to One Test of FeedbackConn"));
   transposeOfTranspose = dynamic_cast<TransposeConn *>(hc->getConnFromName("Transpose of Transpose for One to One Test of FeedbackConn"));
   status = testTransposeOfTransposeWeights(originalMap, transpose, transposeOfTranspose, "One-to-one case, FeedbackConn");

   baseConn = hc->getConnFromName("Original Map for Many to One Test");
   originalMap = dynamic_cast<HyPerConn *>(baseConn);
   //assert(originalMap->usingSharedWeights());
   transpose = dynamic_cast<TransposeConn *>(hc->getConnFromName("Transpose for Many to One Test of FeedbackConn"));
   transposeOfTranspose = dynamic_cast<TransposeConn *>(hc->getConnFromName("Transpose of Transpose for Many to One Test of FeedbackConn"));
   status = testTransposeOfTransposeWeights(originalMap, transpose, transposeOfTranspose, "Many-to-one case, FeedbackConn");

   baseConn = hc->getConnFromName("Original Map for One to Many Test");
   originalMap = dynamic_cast<HyPerConn *>(baseConn);
   //assert(originalMap->usingSharedWeights());
   transpose = dynamic_cast<TransposeConn *>(hc->getConnFromName("Transpose for One to Many Test of FeedbackConn"));
   transposeOfTranspose = dynamic_cast<TransposeConn *>(hc->getConnFromName("Transpose of Transpose for One to Many Test of FeedbackConn"));
   status = testTransposeOfTransposeWeights(originalMap, transpose, transposeOfTranspose, "One-to-many case, FeedbackConn");

   delete hc;
   delete initObj;
   return status;
}
Пример #10
0
int main(int argc, char * argv[]) {
   int rank = 0;
   PV_Init * initObj = new PV_Init(&argc, &argv, false/*allowUnrecognizedArguments*/);
   MPI_Comm_rank(MPI_COMM_WORLD, &rank);
   char const * paramFile1 = "input/CheckpointParameters1.params";
   char const * paramFile2 = "input/CheckpointParameters2.params";
   int status = PV_SUCCESS;
   PV_Arguments * arguments = initObj->getArguments();
   if (arguments->getParamsFile()!=NULL) {
      if (rank==0) {
         fprintf(stderr, "%s should be run without the params file argument.\n", arguments->getProgramName());
      }
      status = PV_FAILURE;
   }
   if (arguments->getCheckpointReadDir()!=NULL) {
      if (rank==0) {
         fprintf(stderr, "%s should be run without the checkpoint directory argument.\n", argv[0]);
      }
      status = PV_FAILURE;
   }
   if (arguments->getRestartFlag()) {
      if (rank==0) {
         fprintf(stderr, "%s should be run without the restart flag.\n", argv[0]);
      }
      status = PV_FAILURE;
   }
   if (status != PV_SUCCESS) {
      if (rank==0) {
         fprintf(stderr, "This test uses two hard-coded params files, %s and %s. The second run is started from a checkpoint from the first run, and the results of the two runs are compared.\n",
               paramFile1, paramFile2);
      }
      MPI_Barrier(MPI_COMM_WORLD);
      exit(EXIT_FAILURE);
   }

   if (rank==0) {
      char const * rmcommand = "rm -rf checkpoints1 checkpoints2 output";
      status = system(rmcommand);
      if (status != 0) {
         fprintf(stderr, "deleting old checkpoints and output directories failed: \"%s\" returned %d\n", rmcommand, status);
         exit(EXIT_FAILURE);
      }
   }

   ParamGroupHandler * customGroupHandler = new CustomGroupHandler;

   arguments->setParamsFile(paramFile1);
   arguments->setBatchWidth(2);

   status = rebuildandrun(initObj, NULL, NULL, &customGroupHandler, 1);
   if( status != PV_SUCCESS ) {
      fprintf(stderr, "%s: rank %d running with params file %s returned error %d.\n", arguments->getProgramName(), rank, paramFile1, status);
      exit(status);
   }

   arguments->setParamsFile(paramFile2);
   arguments->setCheckpointReadDir("checkpoints1/batchsweep_00/Checkpoint12:checkpoints1/batchsweep_01/Checkpoint12");

   status = rebuildandrun(initObj, NULL, &customexit, &customGroupHandler, 1);
   if( status != PV_SUCCESS ) {
      fprintf(stderr, "%s: rank %d running with params file %s returned error %d.\n", arguments->getProgramName(), rank, paramFile2, status);
   }

   delete customGroupHandler;

   delete initObj;
   return status==PV_SUCCESS ? EXIT_SUCCESS : EXIT_FAILURE;
}
int main(int argc, char * argv[]) {
   PV_Init* initObj = new PV_Init(&argc, &argv, false/*allowUnrecognizedArguments*/);
   int status = PV_SUCCESS;
   int rank = 0;
   int numProcs = 0;
   MPI_Comm_rank(MPI_COMM_WORLD, &rank);
   MPI_Comm_size(MPI_COMM_WORLD, &numProcs);
   //int numProcs = initObj->getWorldSize();

   if( numProcs != 6) {
      // TODO Greater than six should be permissible, with the excess over 6 being idle
      if (rank==0) {
         fprintf(stderr, "%s: this test can only be used under MPI with exactly six processes.\n", argv[0]);
      }
      MPI_Barrier(MPI_COMM_WORLD);
      exit(EXIT_FAILURE);
   }
   
   PV_Arguments * arguments = initObj->getArguments();
   if (arguments->getParamsFile()!=NULL) {
      if (rank==0) {
         fprintf(stderr, "%s should be run without the params file argument.\n", arguments->getProgramName());
      }
      status = PV_FAILURE;
   }
   if (arguments->getNumRows()!=0) {
      if (rank==0) {
         fprintf(stderr, "%s should be run without the rows argument.\n", arguments->getProgramName());
      }
      status = PV_FAILURE;
   }
   if (arguments->getNumColumns()!=0) {
      if (rank==0) {
         fprintf(stderr, "%s should be run without the columns argument.\n", arguments->getProgramName());
      }
      status = PV_FAILURE;
   }
   if (status != PV_SUCCESS) {
      if (rank==0) {
         fprintf(stderr, "The necessary parameters are hardcoded.\n");
      }
      MPI_Barrier(MPI_COMM_WORLD);
      exit(EXIT_FAILURE);
   }

   arguments->setParamsFile("input/test_mpi_specifyrowscolumns.params");
   arguments->setNumRows(2);
   arguments->setNumColumns(3);
   buildandverify(initObj);

   arguments->setNumRows(3);
   arguments->setNumColumns(2);
   buildandverify(initObj);

   delete initObj;
   return status;
}
Пример #12
0
int main(int argc, char * argv[])
{
   PV_Init* initObj = new PV_Init(&argc, &argv, false/*allowUnrecognizedArguments*/);
   PV_Arguments * arguments = initObj->getArguments();
   if (arguments->getParamsFile()==NULL) {
      int rank = 0;
      MPI_Comm_rank(MPI_COMM_WORLD, &rank);
      if (rank==0) {
         fprintf(stderr, "%s does not take a -p argument; the necessary param file is hardcoded.\n", argv[0]);
      }
      MPI_Barrier(MPI_COMM_WORLD);
      exit(EXIT_FAILURE);
   }

   arguments->setParamsFile("input/test_gauss2d.params");
   const char * pre_layer_name = "test_gauss2d pre";
   const char * post_layer_name = "test_gauss2d post";
   const char * pre2_layer_name = "test_gauss2d pre 2";
   const char * post2_layer_name = "test_gauss2d post 2";

   initObj->initialize();
   PV::HyPerCol * hc = new PV::HyPerCol("test_gauss2d column", initObj);
   PV::Example * pre = new PV::Example(pre_layer_name, hc);
   assert(pre);
   PV::Example * post = new PV::Example(post_layer_name, hc);
   assert(post);

   
   PV::HyPerConn * cHyPer = new HyPerConn("test_gauss2d hyperconn", hc);

   PV::HyPerConn * cKernel = new HyPerConn("test_gauss2d kernelconn", hc);

   PV::Example * pre2 = new PV::Example(pre2_layer_name, hc);
   assert(pre2);
   PV::Example * post2 = new PV::Example(post2_layer_name, hc);
   assert(post2);

   PV::HyPerConn * cHyPer1to2 =
         new HyPerConn("test_gauss2d hyperconn 1 to 2", hc);
   assert(cHyPer1to2);

   PV::HyPerConn * cKernel1to2 =
         new HyPerConn("test_gauss2d kernelconn 1 to 2", hc);
   assert(cKernel1to2);

   PV::HyPerConn * cHyPer2to1 =
         new HyPerConn("test_gauss2d hyperconn 2 to 1", hc);
   assert(cHyPer2to1);

   PV::HyPerConn * cKernel2to1 =
         new HyPerConn("test_gauss2d kernelconn 2 to 1", hc);
   assert(cKernel2to1);
   
   int status = 0;

   for (int l=0; l<hc->numberOfLayers(); l++) {
      status = hc->getLayer(l)->communicateInitInfo();
      assert(status==PV_SUCCESS);
   }
   for (int c=0; c<hc->numberOfConnections(); c++) {
      status = hc->getConnection(c)->communicateInitInfo();
      assert(status==PV_SUCCESS);
   }
   for (int l=0; l<hc->numberOfLayers(); l++) {
      status = hc->getLayer(l)->allocateDataStructures();
      assert(status==PV_SUCCESS);
   }
   for( int c=0; c<hc->numberOfConnections(); c++ ) {
      BaseConnection * baseConn = hc->getConnection(c);
      HyPerConn * conn = dynamic_cast<HyPerConn *>(baseConn);
      conn->allocateDataStructures();
      conn->writeWeights(0, true);
   }

   const int axonID = 0;
   int num_pre_extended = pre->clayer->numExtended;
   assert(num_pre_extended == cHyPer->getNumWeightPatches());

   for (int kPre = 0; kPre < num_pre_extended; kPre++) {
     //printf("testing testing 1 2 3...\n");
     status = check_kernel_vs_hyper(cHyPer, cKernel, kPre, axonID);
     assert(status==0);
     status = check_kernel_vs_hyper(cHyPer1to2, cKernel1to2, kPre, axonID);
     assert(status==0);
     status = check_kernel_vs_hyper(cHyPer2to1, cKernel2to1, kPre, axonID);
     assert(status==0);
   }

   delete hc;
   delete initObj;
   return 0;
}