// adds just a value c on the input
void eval(RealMatrix const& patterns, RealMatrix& output, State& state)const
{
output.resize(patterns.size1(),m_dim);
for(std::size_t p = 0; p != patterns.size1();++p){
for (size_t i=0;i!=m_dim;++i)
output(p,i)=patterns(p,i)+m_c;
}
}
double evalDerivative(
RealMatrix const&,
RealMatrix const& prediction,
RealMatrix& gradient
) const {
gradient.resize(prediction.size1(),prediction.size2());
gradient.clear();
return 0;
}
void CMACMap::eval(RealMatrix const& patterns,RealMatrix &output) const {
SIZE_CHECK(patterns.size2() == m_inputSize);
std::size_t numPatterns = patterns.size1();
output.resize(numPatterns,m_outputSize);
output.clear();
for(std::size_t i = 0; i != numPatterns; ++i) {
std::vector<std::size_t> indizes = getIndizes(row(patterns,i));
for (std::size_t o=0; o!=m_outputSize; ++o) {
for (std::size_t j = 0; j != m_tilings; ++j) {
output(i,o) += m_parameters(indizes[j] + o*m_parametersPerTiling);
}
}
}
}
void SVMLightDataModel::save (std::string filePath) {
std::cout << "Saving model to " << filePath << std::endl;
// create new datastream
std::ofstream ofs;
ofs.open (filePath.c_str());
if (!ofs)
throw (SHARKSVMEXCEPTION ("[export_SVMLight] file can not be opened for writing"));
// create header first
saveHeader (ofs);
RealMatrix preparedAlphas = container -> m_alphas;
// prepare for binary case
switch (container -> m_svmType) {
case SVMTypes::CSVC: {
// nothing to prepare for CSVC
break;
}
case SVMTypes::Pegasos: {
// FIXME: multiclass
// throw away the alphas we do not need
preparedAlphas.resize (container -> m_alphas.size1(), 1);
// FIXME: better copy...
for (size_t j = 0; j < container -> m_alphas.size1(); ++j) {
preparedAlphas (j, 0) = container -> m_alphas (j, 1);
}
break;
}
default: {
throw (SHARKSVMEXCEPTION ("[SVMLightDataModel::save] Unsupported SVM type."));
}
}
// then save data in SVMLight format
container -> saveSparseLabelAndData (ofs);
ofs.close();
}
void OnlineRNNet::eval(RealMatrix const& pattern, RealMatrix& output){
SIZE_CHECK(pattern.size1()==1);//we can only process a single input at a time.
SIZE_CHECK(pattern.size2() == inputSize());
std::size_t numUnits = mpe_structure->numberOfUnits();
if(m_lastActivation.size() != numUnits){
m_activation.resize(numUnits);
m_lastActivation.resize(numUnits);
zero(m_activation);
zero(m_lastActivation);
}
swap(m_lastActivation,m_activation);
//we want to treat input and bias neurons exactly as hidden or output neurons, so we copy the current
//pattern at the beginning of the the last activation pattern aand set the bias neuron to 1
////so m_lastActivation has the format (input|1|lastNeuronActivation)
noalias(subrange(m_lastActivation,0,mpe_structure->inputs())) = row(pattern,0);
m_lastActivation(mpe_structure->bias())=1;
m_activation(mpe_structure->bias())=1;
//activation of the hidden neurons is now just a matrix vector multiplication
fast_prod(
mpe_structure->weights(),
m_lastActivation,
subrange(m_activation,inputSize()+1,numUnits)
);
//now apply the sigmoid function
for (std::size_t i = inputSize()+1;i != numUnits;i++){
m_activation(i) = mpe_structure->neuron(m_activation(i));
}
//copy the result to the output
output.resize(1,outputSize());
noalias(row(output,0)) = subrange(m_activation,numUnits-outputSize(),numUnits);
}
void CSpace::allocate_coordinates(RealMatrix& coordinates) const
{
coordinates.resize(nb_states(),element_type().dimension());
}
void LibSVMDataModel::save (std::string filePath) {
BOOST_LOG_TRIVIAL (debug) << "Saving model to " << filePath;
// create new datastream
std::ofstream ofs;
ofs.open (filePath.c_str());
if (!ofs)
throw (SHARKSVMEXCEPTION ("File can not be opened for writing!"));
// create header first
saveHeader (ofs);
RealMatrix preparedAlphas = container -> m_alphas;
// prepare for binary case
switch (container -> m_svmType) {
case SVMTypes::CSVC: {
// nothing to prepare for CSVC
break;
}
// FIXME: can we apply binary data to multiclass, if so, what happens to the data model?
case SVMTypes::MCSVMCS:
case SVMTypes::MCSVMLLW:
case SVMTypes::MCSVMMMR:
case SVMTypes::MCSVMOVA:
case SVMTypes::MCSVMADM:
case SVMTypes::MCSVMATM:
case SVMTypes::MCSVMATS:
case SVMTypes::MCSVMWW:{
// nothing to prepare
break;
}
case SVMTypes::SVRG:
case SVMTypes::BSGD:
case SVMTypes::Pegasos: {
BOOST_LOG_TRIVIAL (debug) << "Preparing alpha coefficients from Pegasos/BSGD to LibSVM...";
// we need to throw away the alphas we do not need,
// for the binary case
if (container -> m_alphas.size2() == 2) {
BOOST_LOG_TRIVIAL (debug) << "Found two alphas, so one of them is not needed, removing it.";
preparedAlphas.resize (container -> m_alphas.size1(), 1);
for (size_t j = 0; j < container -> m_alphas.size1(); ++j) {
preparedAlphas (j, 0) = container -> m_alphas (j, 1);
}
}
break;
}
default: {
throw (SHARKSVMEXCEPTION ("Unsupported SVM type!"));
}
}
// copy over our prepared alphas
container -> m_alphas = preparedAlphas;
// sanity check
if (container -> m_alphas.size2() == 2)
throw SHARKSVMEXCEPTION ("Removing extra alpha coefficients in binary case failed!");
// then save data in libsvm format
container -> saveSparseData (ofs);
ofs.close();
}