// -----------------------------------------------------------------------------
//
// -----------------------------------------------------------------------------
void ReadH5Ebsd::copyHEDMArrays(H5EbsdVolumeReader* ebsdReader)
{
float* f1 = NULL;
float* f2 = NULL;
float* f3 = NULL;
int* phasePtr = NULL;
FloatArrayType::Pointer fArray = FloatArrayType::NullPointer();
Int32ArrayType::Pointer iArray = Int32ArrayType::NullPointer();
VoxelDataContainer* m = getVoxelDataContainer();
int64_t totalPoints = m->getTotalPoints();
if (m_SelectedVoxelCellArrays.find(m_CellEulerAnglesArrayName) != m_SelectedVoxelCellArrays.end() )
{
// radianconversion = M_PI / 180.0;
f1 = reinterpret_cast<float*>(ebsdReader->getPointerByName(Ebsd::Mic::Euler1));
f2 = reinterpret_cast<float*>(ebsdReader->getPointerByName(Ebsd::Mic::Euler2));
f3 = reinterpret_cast<float*>(ebsdReader->getPointerByName(Ebsd::Mic::Euler3));
fArray = FloatArrayType::CreateArray(totalPoints * 3, DREAM3D::CellData::EulerAngles);
fArray->SetNumberOfComponents(3);
float* cellEulerAngles = fArray->GetPointer(0);
for (int64_t i = 0; i < totalPoints; i++)
{
cellEulerAngles[3 * i] = f1[i];
cellEulerAngles[3 * i + 1] = f2[i];
cellEulerAngles[3 * i + 2] = f3[i];
}
m->addCellData(DREAM3D::CellData::EulerAngles, fArray);
}
if (m_SelectedVoxelCellArrays.find(m_CellPhasesArrayName) != m_SelectedVoxelCellArrays.end() )
{
phasePtr = reinterpret_cast<int*>(ebsdReader->getPointerByName(Ebsd::Mic::Phase));
iArray = Int32ArrayType::CreateArray(totalPoints, DREAM3D::CellData::Phases);
iArray->SetNumberOfComponents(1);
::memcpy(iArray->GetPointer(0), phasePtr, sizeof(int32_t) * totalPoints);
m->addCellData(DREAM3D::CellData::Phases, iArray);
}
if (m_SelectedVoxelCellArrays.find(Ebsd::Mic::Confidence) != m_SelectedVoxelCellArrays.end() )
{
f1 = reinterpret_cast<float*>(ebsdReader->getPointerByName(Ebsd::Mic::Confidence));
fArray = FloatArrayType::CreateArray(totalPoints, Ebsd::Mic::Confidence);
fArray->SetNumberOfComponents(1);
::memcpy(fArray->GetPointer(0), f1, sizeof(float) * totalPoints);
m->addCellData(Ebsd::Mic::Confidence, fArray);
}
}
// -----------------------------------------------------------------------------
//
// -----------------------------------------------------------------------------
int H5PrimaryStatsDataDelegate::readMDFWeights(hid_t pid, PrimaryStatsData* data)
{
int err = 0;
FloatArrayType::Pointer angles = FloatArrayType::CreateArray(1, DREAM3D::HDF5::Angle);
FloatArrayType::Pointer axis = FloatArrayType::CreateArray(3, DREAM3D::HDF5::Axis);
axis->SetNumberOfComponents(3);
FloatArrayType::Pointer weight = FloatArrayType::CreateArray(1, DREAM3D::HDF5::Weight);
VectorOfFloatArray mdfWeights;
mdfWeights.push_back(angles);
mdfWeights.push_back(axis);
mdfWeights.push_back(weight);
hid_t groupId = H5Utilities::openHDF5Object(pid, DREAM3D::HDF5::MDFWeights);
if (groupId > 0)
{
err = readVectorOfArrays(groupId, mdfWeights);
if(err >= 0)
{
data->setMDF_Weights(mdfWeights);
}
}
err = H5Utilities::closeHDF5Object(groupId);
return err;
}