CMoveResponse
::CMoveResponse(Message const & message)
: Response(message)
{
if(message.get_command_field() != DIMSE_C_MOVE_RSP)
{
throw Exception("Message is not a C-MOVE-RSP");
}
this->set_command_field(message.get_command_field());
DCMTKPP_MESSAGE_SET_OPTIONAL_FIELD_MACRO(
message.get_command_set(), message_id, DCM_MessageID, EVR_US)
DCMTKPP_MESSAGE_SET_OPTIONAL_FIELD_MACRO(
message.get_command_set(), affected_sop_class_uid,
DCM_AffectedSOPClassUID, EVR_UI)
DCMTKPP_MESSAGE_SET_OPTIONAL_FIELD_MACRO(
message.get_command_set(), number_of_remaining_sub_operations,
DcmTagKey(0x0000, 0x1020), EVR_US)
DCMTKPP_MESSAGE_SET_OPTIONAL_FIELD_MACRO(
message.get_command_set(), number_of_completed_sub_operations,
DcmTagKey(0x0000, 0x1021), EVR_US)
DCMTKPP_MESSAGE_SET_OPTIONAL_FIELD_MACRO(
message.get_command_set(), number_of_failed_sub_operations,
DcmTagKey(0x0000, 0x1022), EVR_US)
DCMTKPP_MESSAGE_SET_OPTIONAL_FIELD_MACRO(
message.get_command_set(), number_of_warning_sub_operations,
DcmTagKey(0x0000, 0x1023), EVR_US)
this->set_data_set(message.get_data_set());
}
void DicomInfo::getInfo(const char address[])
{
OFString UintStr;
DicomInfo::fileformat.loadFile(address);
DicomInfo::dataset=DicomInfo::fileformat.getDataset();
dataset->findAndGetOFString(DcmTagKey(0x0028,0x0010),UintStr);
DicomInfo::width=OFtoUint16(UintStr);
dataset->findAndGetOFString(DcmTagKey(0x0028,0x0011),UintStr);
DicomInfo::height=OFtoUint16(UintStr);
dataset->findAndGetOFString(DcmTagKey(0x0018,0x1060),UintStr);
DicomInfo::time=OFtoSignal(UintStr);
const Uint16 *tempPoints;
PixelData = new _signal [height*width];
DicomInfo::dataset->findAndGetUint16Array(DCM_PixelData,tempPoints);
for(int i=0;i<height;i++)
{
for(int j=0; j<width;j++)
{
PixelData[i*height+j]=(_signal)tempPoints[i*height+j];
}
}
}
DcmTagKey ToDcmtkBridge::Convert(const DicomTag& tag)
{
return DcmTagKey(tag.GetGroup(), tag.GetElement());
}
void SortDcmFile::sortFile(const char url[])
{
QDir *dir=new QDir(url);
QStringList filter;
DcmFileFormat fileformat;
OFString tempinfo;
QString FileAddress = QString(url);
//如果重名
SortDcmFile::changName(url);
//获取目录下所有文件名（含两个目录名）
QList<QFileInfo> *fileInfo=new QList<QFileInfo>(dir->entryInfoList(filter));
QList<dicomInfo> sortInfo;
//获取dicom信息
for(int i = 2 ; i < fileInfo->count() ; ++i)
{
dicomInfo temp;
temp.filename = fileInfo->at(i).fileName();
QByteArray ba = fileInfo->at(i).filePath().toLatin1();
char *url = ba.data();
OFCondition os=fileformat.loadFile(url);
if(os.good())
{
if((fileformat.getDataset()->findAndGetOFString(DcmTagKey(0x0020,0x0013),tempinfo)).good())
{
temp.imageID=tempinfo;
//cout<<temp.imageID<<endl;
}else
{
cout<<"No Find"<<endl;
}
if(fileformat.getDataset()->findAndGetOFString(DcmTagKey(0x0020,0x1041),tempinfo).good())
{
temp.sliceLocation=OFtoSignal(tempinfo);
}else
{
cout<<"No Find"<<endl;
}
sortInfo.push_back(temp);
}
}
sort(sortInfo.begin(),sortInfo.end(),cmp);
QList<dicomInfo>::iterator it;
//分组
double tempbef=9999;
int group=0;
int group_number=-1;
//QList<dicomInfo>::iterator it;
for(it=sortInfo.begin();it!=sortInfo.end();it++)
{
if(it->sliceLocation>tempbef)
{
group++;
SortDcmFile::Pslice = group_number+1;
group_number=0;
tempbef=9999;
}else
{
tempbef=it->sliceLocation;
group_number++;
}
SortDcmFile::PsetNum = group+1;
QFile::rename( FileAddress+it->filename ,FileAddress+"IM"+QString::fromStdString(itos(group))+"-"+QString::fromStdString(itos(group_number)));
}
}
int ctkDICOMDatasetTest1( int argc, char * argv [] )
{
Q_UNUSED(argc);
Q_UNUSED(argv);
ctkDICOMDataset dataset;
dataset.InitializeFromDataset(0);
dataset.InitializeFromFile(QString());
try
{
dataset.Serialize();
}
catch(...)
{
std::cout << "ctkDICOMDataset::Serialize() throws exceptions" << std::endl;
//return EXIT_FAILURE;
}
try
{
dataset.Deserialize();
}
catch(...)
{
std::cout << "ctkDICOMDataset::Deserialize() throws exceptions"
<< std::endl;
//return EXIT_FAILURE;
}
dataset.MarkForInitialization();
try
{
dataset.EnsureDcmDataSetIsInitialized();
}
catch(...)
{
std::cout << "ctkDICOMDataset::EnsureDcmDataSetIsInitialized() throws"
<< " exceptions" << std::endl;
//return EXIT_FAILURE;
}
// deactivating the lower part since it (correctly) causes
// execptions since it calls methods on an uninitialized object
return EXIT_SUCCESS;
dataset.CopyElement(0, DcmTagKey(), 0);
QString decode = dataset.Decode(DcmTag(),OFString());
if (!decode.isEmpty())
{
std::cerr << "ctkDICOMDataset::Decode() failed: "
<< qPrintable(decode) << std::endl;
return EXIT_FAILURE;
}
OFString encode = dataset.Encode(DcmTag(), decode);
DcmElement* element = 0;
OFCondition condition = dataset.findAndGetElement(DcmTag(), element);
if (ctkDICOMDataset::CheckCondition(condition))
{
std::cerr << "ctkDICOMDataset::findAndGetElement() failed" << std::endl;
return EXIT_FAILURE;
}
OFString string;
condition = dataset.findAndGetOFString(DcmTag(), string);
if (ctkDICOMDataset::CheckCondition(condition))
{
std::cerr << "ctkDICOMDataset::findAndGetOFString() failed" << std::endl;
return EXIT_FAILURE;
}
try
{
QString string = dataset.GetAllElementValuesAsString(DcmTag());
QString string2 = dataset.GetElementAsString(DcmTag());
QStringList list = dataset.GetElementAsStringList(DcmTag());
ctkDICOMPersonName name = dataset.GetElementAsPersonName(DcmTag());
ctkDICOMPersonNameList nameList = dataset.GetElementAsPersonNameList(DcmTag());
QDate date = dataset.GetElementAsDate(DcmTag());
QTime time = dataset.GetElementAsTime(DcmTag());
double doubleValue = dataset.GetElementAsDouble(DcmTag());
int integerValue = dataset.GetElementAsInteger(DcmTag());
int shortValue = dataset.GetElementAsSignedShort(DcmTag());
int ushortValue = dataset.GetElementAsUnsignedShort(DcmTag());
QDateTime dateTime = dataset.GetElementAsDateTime(DcmTag());
Q_UNUSED(string);
Q_UNUSED(string2);
Q_UNUSED(list);
Q_UNUSED(name);
Q_UNUSED(nameList);
Q_UNUSED(date);
Q_UNUSED(time);
Q_UNUSED(doubleValue);
Q_UNUSED(integerValue);
Q_UNUSED(shortValue);
Q_UNUSED(ushortValue);
Q_UNUSED(dateTime);
dataset.SetElementAsString( DcmTag(), QString());
dataset.SetElementAsStringList( DcmTag(), QStringList() );
dataset.SetElementAsPersonName( DcmTag(), ctkDICOMPersonName());
dataset.SetElementAsPersonNameList( DcmTag(), ctkDICOMPersonNameList() );
dataset.SetElementAsDate( DcmTag(), QDate() );
dataset.SetElementAsTime( DcmTag(), QTime() );
dataset.SetElementAsDateTime( DcmTag(), QDateTime() );
dataset.SetElementAsInteger( DcmTag(), 0 ); // type IS
dataset.SetElementAsSignedShort( DcmTag(), 0 ); // type SS
dataset.SetElementAsUnsignedShort( DcmTag(), 0 ); // type US
}
catch(...)
{
std::cout << "ctkDICOMDataset::GetElementValueAsXXX() throws exceptions"
<< std::endl;
//return EXIT_FAILURE;
}
ctkDICOMDataset::TranslateDefinedTermPatientPosition(QString());
ctkDICOMDataset::TranslateDefinedTermModality(QString());
ctkDICOMDataset::TagKey(DcmTag());
ctkDICOMDataset::TagDescription(DcmTag());
ctkDICOMDataset::TagVR(DcmTag());
return EXIT_SUCCESS;
}
int calculate_method::PWI_Compute(string input,string output,PWIConstTable *PWIconst)
{
int S0Index;
//PWI read
DicomInfo PWIinfo;
cout<<"after sort"<<endl;
getDcm *PWIcommon=new getDcm(input);
//读取PWI原始信息
for(int i = 0 ;i < PWIconst->PSetNum ; i++)
{
for(int j = 0 ; j < PWIconst->PSliceNum ;j++)
{
PWIinfo.getInfo((PWIcommon->dir+"IM"+itos(i)+"-"+itos(j)).c_str());
PWIArray[TWO_D(i,j,PWIconst->PSliceNum)] = PWIinfo;
}
}
PWIArray[TWO_D(0,0,PWIconst->PSetNum)].dataset->findAndGetUint16(DcmTagKey(0x0028,0x0010),PWIcommon->height); //读取图片高度
PWIArray[TWO_D(0,0,PWIconst->PSetNum)].dataset->findAndGetUint16(DcmTagKey(0x0028,0x0011),PWIcommon->width); //读取图片宽度
DicomInfo *s0 = new DicomInfo[PWIconst->PSliceNum];
for(int i = 0; i < PWIconst->PSliceNum; ++i)
{
s0[i].allocMemory( PWIcommon->height * PWIcommon->width);
}
S0Index = PWIconst->STDNum-1;
//获取S0值
for(int i = 0;i < PWIconst->PSliceNum ; ++i)
{
for(int j = 0;j < PWIcommon->height; ++j)
{
for(int k = 0;k < PWIcommon->width;++k)
{
s0[i].PixelData[TWO_D(j,k,PWIcommon->width)] = PWIArray[TWO_D(S0Index,i,PWIconst->PSliceNum)].PixelData[TWO_D(j,k,PWIcommon->width)];
}
}
}
//获取s0的均值
int signalnum,s0Sum = 0;
_signal avg=0;
for(int i = 0;i < PWIconst->PSliceNum ; ++i )
{
signalnum=0;
s0Sum = 0;
for(int j = 0;j < PWIcommon->height; ++j)
{
for(int k = 0 ; k < PWIcommon->width; ++k)
{
if(s0[i].PixelData[TWO_D(j,k,PWIcommon->width)] != 0)
{
s0Sum += PWIArray[TWO_D(S0Index,i,PWIconst->PSliceNum)].PixelData[TWO_D(j,k,PWIcommon->width)];
signalnum++;
}
}
}
avg = ((_signal)s0Sum)/signalnum * 0.5;
//过滤掉小于50%的点 mask ADC 600-2100!!!!!
for(int k = 0;k < PWIcommon->height; ++k)
{
for(int l = 0;l < PWIcommon->width; ++l)
{
if(s0[i].PixelData[TWO_D(k,l,PWIcommon->width)]<avg)
{
s0[i].PixelData[TWO_D(k,l,PWIcommon->width)] = 0 ;
}
}
}
}
//计算R2
for(int i = 0;i < PWIconst->PSetNum ; ++i)
{
for(int j = 0;j < PWIconst->PSliceNum; ++j)
{
for(int k = 0;k < PWIcommon->height; ++k)
{
for(int l = 0;l < PWIcommon->width; ++l)
{
//判断是否为过滤掉的点
if(s0[j].PixelData[TWO_D(k,l,PWIcommon->width)] != 0 )
{
if(PWIArray[TWO_D(i,j,PWIconst->PSliceNum)].PixelData[TWO_D(k,l,PWIcommon->width)]!=0)
{
PWIArray[TWO_D(i,j,PWIconst->PSliceNum)].PixelData[TWO_D(k,l,PWIcommon->width)]=R2(s0[j].PixelData[TWO_D(k,l,PWIcommon->width)],PWIArray[TWO_D(i,j,PWIconst->PSliceNum)].PixelData[TWO_D(k,l,PWIcommon->width)],PWIconst->TE);
}else
{
//当St值为0时的处理方法
PWIArray[TWO_D(i,j,PWIconst->PSliceNum)].PixelData[TWO_D(k,l,PWIcommon->width)]=R2(s0[j].PixelData[TWO_D(k,l,PWIcommon->width)],1,PWIconst->TE);//测试第二个参数!!!!
}
}
else
{
//将过滤掉的点置为0
PWIArray[TWO_D(i,j,PWIconst->PSliceNum)].PixelData[TWO_D(k,l,PWIcommon->width)] = 0;
}
}
}
}
}
//get Position of AIF
for(int i = 0;i < PWIconst->PSetNum ; ++i)//分配内存
{
for(int j = 0;j < PWIconst->PSliceNum; ++j)
{
PWICav[TWO_D(i,j,PWIconst->PSliceNum)].allocMemory(PWIcommon->height*PWIcommon->width);//分配空间
PWICt[TWO_D(i,j,PWIconst->PSliceNum)].allocMemory(PWIcommon->height*PWIcommon->width);
PWIRt[TWO_D(i,j,PWIconst->PSliceNum)].allocMemory(PWIcommon->height*PWIcommon->width);
PWICav[TWO_D(i,j,PWIconst->PSliceNum)].time=PWIArray[TWO_D(i,j,PWIconst->PSliceNum)].time;
}
}
int MRtype =1;// PWIconst->TType;//MRI类型 1.5T 或者 3.0T
for(int i = 0 ;i < PWIconst->PSetNum; ++i)
{
for(int j = 0;j < PWIconst->PSliceNum;++j)
{
for(int k = 0;k < PWIcommon->height;++k)
{
for(int l = 0;l < PWIcommon->width;++l)
{
PWICt[TWO_D(i,j,PWIconst->PSliceNum)].PixelData[TWO_D(k,l,PWIcommon->width)]= Ct(PWIArray[TWO_D(i,j,PWIconst->PSliceNum)].PixelData[TWO_D(k,l,PWIcommon->width)],MRtype,PWIconst->x[MRtype][0]);
}
}
}
}
//AIF Selection
//get avg of Area
DicomInfo * AreaAndCt = new DicomInfo[ PWIconst->PSliceNum ];
for(int j = 0 ; j < PWIconst->PSliceNum ; ++j)
{
AreaAndCt[j].allocMemory(PWIcommon->height*PWIcommon->width);
for(int i =0 ; i < PWIcommon->height*PWIcommon->width ; ++i)
{
AreaAndCt[j].PixelData[i] = 0;
}
}
double temArea = 0;
int AllCurve = 0;
_signal Area;
_signal SecondOrderThreshold;
int AIFtestZ;
int AIFtestX;
int AIFtestY;
double testC = 0;
double temC = 0;
vector<double> AreaSet;
_signal * DsFirstOrder = new _signal [PWIconst->PSetNum];
_signal * DsSecondOrder = new _signal [PWIconst->PSetNum];
for(int j = 10;j < 20; ++j)
{
for(int k = 0;k < PWIcommon->height*2/3; ++k)
{
for(int l = 0;l < PWIcommon->width; ++l)
{
if(s0[j].PixelData[TWO_D(k,l,PWIcommon->width)]==0)
{
continue;
}
AllCurve++;
for(int i = PWIconst->STDNum-1;i < PWIconst->PSetNum-1 ; ++i)
{
AreaAndCt[j].PixelData[TWO_D(k,l,PWIcommon->width)] += PWIArray[TWO_D(i,j,PWIconst->PSliceNum)].PixelData[TWO_D(k,l,PWIcommon->width)]+PWIArray[TWO_D(i+1,j,PWIconst->PSliceNum)].PixelData[TWO_D(k,l,PWIcommon->width)];
}
AreaSet.push_back(AreaAndCt[j].PixelData[TWO_D(k,l,PWIcommon->width)]);
}
}
}
sort(AreaSet.begin(),AreaSet.end());
Area = AreaSet[(int)(AllCurve*0.9)];
AreaSet.clear();
//Ct daoshu
AllCurve = 0;
for(int j = 10;j < 20; ++j)
{
for(int k = 0;k < PWIcommon->height*2/3; ++k)
{
for(int l = 0;l < PWIcommon->width; ++l)
{
if(s0[j].PixelData[TWO_D(k,l,PWIcommon->width)]==0||AreaAndCt[j].PixelData[TWO_D(k,l,PWIcommon->width)]<Area)
{
AreaAndCt[j].PixelData[TWO_D(k,l,PWIcommon->width)] = 0;
continue;
}
++AllCurve;
for(int i = PWIconst->STDNum-1; i< PWIconst->PSetNum ; ++i)
{
DsSecondOrder[i] = PWIArray[TWO_D(i,j,PWIconst->PSliceNum)].PixelData[TWO_D(k,l,PWIcommon->width)];
}
for(int i = PWIconst->STDNum-1;i < PWIconst->PSetNum ; ++i)
{
if(i==PWIconst->STDNum-1)
{
DsFirstOrder[i] = (-3*DsSecondOrder[i] + 4 * DsSecondOrder[i+1] - DsSecondOrder[i+2]);
}else if(i == PWIconst->PSetNum-1)
{
DsFirstOrder[i] = (DsSecondOrder[i-2] - 4 * DsSecondOrder[i-1] + 3 * DsSecondOrder[i]);
}else
{
DsFirstOrder[i] = ( -1*DsSecondOrder[i-1]+DsSecondOrder[i+1]);
}
}
for(int i = PWIconst->STDNum-1;i < PWIconst->PSetNum ; ++i)
{
if(i==PWIconst->STDNum-1)
{
DsSecondOrder[i] = (-3*DsFirstOrder[i] + 4 * DsFirstOrder[i+1] - DsFirstOrder[i+2]);
}else if(i == PWIconst->PSetNum-1)
{
DsSecondOrder[i] = (DsFirstOrder[i-2] - 4 * DsFirstOrder[i-1] + 3 * DsFirstOrder[i]);
}else
{
DsSecondOrder[i] = ( -1*DsFirstOrder[i-1]+DsFirstOrder[i+1]);
}
DsSecondOrder[i]=DsSecondOrder[i]*DsSecondOrder[i];
}
_signal temSecondOrder = calcul(1.8,DsSecondOrder+PWIconst->STDNum-1,PWIconst->PSetNum-PWIconst->STDNum);
AreaAndCt[j].PixelData[TWO_D(k,l,PWIcommon->width)] = temSecondOrder;
AreaSet.push_back(temSecondOrder);
}
}
}
sort(AreaSet.begin(),AreaSet.end());
SecondOrderThreshold = AreaSet[(int)(AllCurve*0.75)];
AreaSet.clear();
for(int j = 10;j < 20; ++j)
{
for(int k = 0;k < PWIcommon->height*2/3; ++k)
{
for(int l = 0;l < PWIcommon->width; ++l)
{
if(AreaAndCt[j].PixelData[TWO_D(k,l,PWIcommon->width)]>SecondOrderThreshold)
{
AreaAndCt[j].PixelData[TWO_D(k,l,PWIcommon->width)] = 0;
}
}
}
}
/**SecondOrder version**/
double avgTime,avgHeight,avgWidth;
avgTime = 0;
avgHeight = 0;
avgWidth = 0;
double minIndex = 0;
double maxIndex = 0;
double maxR2 = -100;
for(int j = 10;j < 20; ++j)
{
for(int k = 0;k < PWIcommon->height*2/3; ++k)
{
for(int l = 0;l < PWIcommon->width; ++l)
{
minIndex = PWIconst->PSetNum-1;
maxIndex = -1;
maxR2 = -100;
if(AreaAndCt[j].PixelData[TWO_D(k,l,PWIcommon->width)] == 0)
{
continue;
}
for(int i = PWIconst->STDNum-1; i< PWIconst->PSetNum ; ++i)
{
DsSecondOrder[i] = PWIArray[TWO_D(i,j,PWIconst->PSliceNum)].PixelData[TWO_D(k,l,PWIcommon->width)];
if(maxR2<DsSecondOrder[i])
maxR2 = DsSecondOrder[i];
}
for(int i = PWIconst->STDNum-1;i < PWIconst->PSetNum ; ++i)
{
if(i==PWIconst->STDNum-1)
{
DsFirstOrder[i] = (-3*DsSecondOrder[i] + 4 * DsSecondOrder[i+1] - DsSecondOrder[i+2]);
}else if(i == PWIconst->PSetNum-1)
{
DsFirstOrder[i] = (DsSecondOrder[i-2] - 4 * DsSecondOrder[i-1] + 3 * DsSecondOrder[i]);
}else
{
DsFirstOrder[i] = ( -1*DsSecondOrder[i-1]+DsSecondOrder[i+1]);
}
}
for(int i = PWIconst->STDNum+1;i < PWIconst->PSetNum ; ++i)
{
if(i==PWIconst->STDNum-1)
{
DsSecondOrder[i] = (-3*DsFirstOrder[i] + 4 * DsFirstOrder[i+1] - DsFirstOrder[i+2]);
}else if(i == PWIconst->PSetNum-1)
{
DsSecondOrder[i] = (DsFirstOrder[i-2] - 4 * DsFirstOrder[i-1] + 3 * DsFirstOrder[i]);
}else
{
DsSecondOrder[i] = ( -1*DsFirstOrder[i-1]+DsFirstOrder[i+1]);
}
}
for(int i = PWIconst->STDNum+1;i < PWIconst->PSetNum ; ++i)
{
if(DsSecondOrder[i] >0.008)
{
if(i<minIndex)
{
minIndex = i;
}
if(i>maxIndex)
{
maxIndex =i;
}
}
}
if(maxIndex == -1)
{
maxIndex =PWIconst->PSetNum-1;
}
if(minIndex == PWIconst->PSetNum-1)
{
minIndex =0;
maxIndex = PWIconst->PSetNum-1;
}
avgHeight += maxR2 * 100;
avgTime += minIndex* 1.8;
avgWidth += (maxIndex - minIndex)*1.8;
}
}
}
avgHeight/=AllCurve;
avgWidth/=AllCurve;
avgTime/=AllCurve;
for(int j = 10;j < 20; ++j)
{
for(int k = 0;k < PWIcommon->height*2/3; ++k)
{
for(int l = 0;l < PWIcommon->width; ++l)
{
minIndex = PWIconst->PSetNum-1;
maxIndex = -1;
maxR2 = -100;
if(AreaAndCt[j].PixelData[TWO_D(k,l,PWIcommon->width)] == 0)
{
continue;
}
for(int i = PWIconst->STDNum-1; i< PWIconst->PSetNum ; ++i)
{
DsSecondOrder[i] = PWIArray[TWO_D(i,j,PWIconst->PSliceNum)].PixelData[TWO_D(k,l,PWIcommon->width)];
if(maxR2<DsSecondOrder[i])
maxR2 = DsSecondOrder[i];
}
for(int i = PWIconst->STDNum-1;i < PWIconst->PSetNum ; ++i)
{
if(i==PWIconst->STDNum-1)
{
DsFirstOrder[i] = (-3*DsSecondOrder[i] + 4 * DsSecondOrder[i+1] - DsSecondOrder[i+2]);
}else if(i == PWIconst->PSetNum-1)
{
DsFirstOrder[i] = (DsSecondOrder[i-2] - 4 * DsSecondOrder[i-1] + 3 * DsSecondOrder[i]);
}else
{
DsFirstOrder[i] = ( -1*DsSecondOrder[i-1]+DsSecondOrder[i+1]);
}
}
for(int i = PWIconst->STDNum+1;i < PWIconst->PSetNum ; ++i)
{
if(i==PWIconst->STDNum-1)
{
DsSecondOrder[i] = (-3*DsFirstOrder[i] + 4 * DsFirstOrder[i+1] - DsFirstOrder[i+2]);
}else if(i == PWIconst->PSetNum-1)
{
DsSecondOrder[i] = (DsFirstOrder[i-2] - 4 * DsFirstOrder[i-1] + 3 * DsFirstOrder[i]);
}else
{
DsSecondOrder[i] = ( -1*DsFirstOrder[i-1]+DsFirstOrder[i+1]);
}
}
for(int i = PWIconst->STDNum+1;i < PWIconst->PSetNum ; ++i)
{
if(DsSecondOrder[i] >0.008)
{
if(i<minIndex)
{
minIndex = i;
}
if(i>maxIndex)
maxIndex =i;
}
}
if(maxIndex == -1)
{
maxIndex =PWIconst->PSetNum-1;
}
if(minIndex == PWIconst->PSetNum-1)
{
minIndex =0;
maxIndex = PWIconst->PSetNum-1;
}
if(minIndex == maxIndex)
maxIndex = PWIconst->PSetNum-1;
temC = PWIconst->ck1*(maxR2*100 - avgHeight) + PWIconst->ck2*(minIndex*1.8 - avgTime) + PWIconst->ck3 * ((maxIndex - minIndex)*1.8 - avgWidth);
if(maxR2*100>avgHeight && minIndex*1.8<avgTime && (maxIndex - minIndex)*1.8<avgWidth)
{
if(temC > testC)
{
testC = temC;
AIFtestZ = j;
AIFtestX = l;
AIFtestY = k;
}
}
}
}
}
delete [] AreaAndCt;
delete [] DsFirstOrder;
delete [] DsSecondOrder;
int AIFz = AIFtestZ;
int AIFy = AIFtestY;
int AIFx = AIFtestX;
/*AIF end*/
for(int i = 0 ;i < PWIconst->PSetNum; ++i)
{
for(int j = 0;j < PWIconst->PSliceNum;++j)
{
for(int k = 0;k < PWIcommon->height;++k)
{
for(int l = 0;l < PWIcommon->width;++l)
{
//获取Cav的值
PWICav[TWO_D(i,j,PWIconst->PSliceNum)].PixelData[TWO_D(k,l,PWIcommon->width)]=Cav(PWIArray[TWO_D(i,j,PWIconst->PSliceNum)].PixelData[TWO_D(k,l,PWIcommon->width)],MRtype,PWIconst->x[MRtype][1],PWIconst->x[MRtype][2]);
}
}
}
}
Uint16 temPixel[128*128];
cout<<"Cav Ct OK"<<endl;
//给FFT输入做赋值
fftw_plan p;
//计算卷积
for(int i = 0 ;i < PWIconst->PSliceNum; ++i )
{
for(int j = 0; j < PWIcommon->height;++j)
{
for(int k = 0;k < PWIcommon->width; ++k)
{
//zero padding!!!!!!!!!!!!!! 不是这样
for(int l = S0Index ; l < PWIconst->PSetNum;++l)
{ //15 52 44
TempInFFTCt[l-S0Index][0]=PWICt[TWO_D(l,i,PWIconst->PSliceNum)].PixelData[TWO_D(j,k,PWIcommon->width)];
TempInFFTCa[l-S0Index][0]=PWICav[TWO_D(l,AIFz,PWIconst->PSliceNum)].PixelData[TWO_D(AIFy,AIFx,PWIcommon->width)];
TempInFFTCt[l-S0Index][1] = 0;
TempInFFTCa[l-S0Index][1] = 0;
}
for(int l = PWIconst->PSetNum-S0Index ; l < 2*(PWIconst->PSetNum-S0Index);++l)
{
TempInFFTCt[l][0] = 0;
TempInFFTCa[l][0] = 0;
TempInFFTCt[l][1] = 0;
TempInFFTCa[l][1] = 0;
}
//计算FFT
p=fftw_plan_dft_1d( PWIconst->PSetNum-S0Index ,TempInFFTCt ,TempOutFFTCt , FFTW_FORWARD, FFTW_ESTIMATE);
fftw_execute(p);
fftw_destroy_plan(p);
p=fftw_plan_dft_1d(PWIconst->PSetNum-S0Index ,TempInFFTCa, TempOutFFTCa , FFTW_FORWARD, FFTW_ESTIMATE);
fftw_execute(p); //理解out
fftw_destroy_plan(p);
//FFT(TempInFFTCt,TempOutFFTCt,FFTLayer);
//FFT(TempInFFTCa,TempOutFFTCa,FFTLayer);
_signal maxFFTCa=-99999;
for(int l = 0 ; l < 2 * (PWIconst->PSetNum - S0Index); ++l)
{
int tempFFTCa = sqrt(TempOutFFTCa[l][0]*TempOutFFTCa[l][0]+TempOutFFTCa[l][1]*TempOutFFTCa[l][1]);
if(maxFFTCa < tempFFTCa)
maxFFTCa = tempFFTCa;
}
_signal TempN = maxFFTCa * PWIconst->pr/2;
_signal TempG;
for(int l = 0 ; l < 2 * (PWIconst->PSetNum - S0Index); ++l)
{
int tempFFTCa = sqrt(TempOutFFTCa[l][0]*TempOutFFTCa[l][0]+TempOutFFTCa[l][1]*TempOutFFTCa[l][1]);
if(tempFFTCa > TempN && l != 0)
{
TempG=(tempFFTCa*tempFFTCa-TempN*TempN)/(tempFFTCa*tempFFTCa);
}else if(l==0)
{
TempG=1;
}else
{
TempG=0;
}
if(TempG!=0)
{
TempInIFFT[l][0]=TempG * Divide_Real(TempOutFFTCt[l],TempOutFFTCa[l]);
TempInIFFT[l][1]=TempG * Divide_Img(TempOutFFTCt[l],TempOutFFTCa[l]);
}else
{
TempInIFFT[l][0]=0;
TempInIFFT[l][1]=0;
}
//cout<<TempInIFFT[l]<<endl;
}
//计算IFFT
p=fftw_plan_dft_1d(PWIconst->PSetNum-S0Index,TempInIFFT,TempOutIFFT, FFTW_BACKWARD, FFTW_ESTIMATE);
fftw_execute(p);
fftw_destroy_plan(p);
//求出Rt
for(int l = 0 ; l < PWIconst->PSetNum-S0Index; ++l)
{
PWIRt[TWO_D(l,i,PWIconst->PSliceNum)].PixelData[TWO_D(j,k,PWIcommon->width)]=1/(PWIconst->PSetNum*1.8)*TempOutIFFT[l][0];
//cout<<PWIRt[TWO_D(i,l,PWIconst->PSliceNum)].PixelData[TWO_D(j,k,PWIcommon->width)]<<endl;
}
}
}
}
//free fft
//估算Kav
int calVOF;
int calAIF;
_signal temVOF[62];
_signal temAIF[62];
calVOF = calcul(1800,temVOF,PWIconst->PSetNum);
calAIF = calcul(1800,temAIF,PWIconst->PSetNum);
cout<<"KAV: AIF:"<<calAIF<<" VOF:"<<calVOF<<endl;
//计算CBV MTT
for(int i = 0; i < PWIconst->PSliceNum; ++i)
{
PWICBV[i].allocMemory(PWIcommon->height*PWIcommon->width);
PWIMTT[i].allocMemory(PWIcommon->height*PWIcommon->width);
PWICBF[i].allocMemory(PWIcommon->height*PWIcommon->width);
PWITmax[i].allocMemory(PWIcommon->height*PWIcommon->width);
}
_signal Integral_Ca=0;
_signal Integral_Ct=0;
_signal k0 = getK0(PWIconst->ro,PWIconst->HSV,PWIconst->HLV);
int kav =1;
for(int j = 0 ; j < PWIconst->PSliceNum; ++j)
{
for(int k = 0; k < PWIcommon->height; ++k)
{
for(int l = 0; l < PWIcommon->width; ++l)
{
_signal maxRt = -10000;
_signal maxRtt = 0;
for(int i = 0; i < PWIconst->PSetNum-S0Index; ++i)
{
tempCt[i]=PWICt[TWO_D(i+S0Index,j,PWIconst->PSliceNum)].PixelData[TWO_D(k,l,PWIcommon->width)];
tempCa[i]=PWICav[TWO_D(i+S0Index,AIFz,PWIconst->PSliceNum)].PixelData[TWO_D(AIFy,AIFx,PWIcommon->width)];
//求出rt达到最大值时的t值
/*if(j==SelectSlice&&k==index_x&&l==index_y)
{
cout<<PWIRt[TWO_D(i,j,PWIconst->PSliceNum)].PixelData[TWO_D(k,l,PWIcommon->width)]<<" ";
}*/
//i<=(PWIconst->PSetNum-S0Index)/2+1 &&
if( i <= (PWIconst->PSetNum-S0Index)/2+1 && PWIRt[TWO_D(i,j,PWIconst->PSliceNum)].PixelData[TWO_D(k,l,PWIcommon->width)]>maxRt)
{
maxRt = PWIRt[TWO_D(i,j,PWIconst->PSliceNum)].PixelData[TWO_D(k,l,PWIcommon->width)];
maxRtt = i*1.8;
}
}
Integral_Ca=calcul(1800,tempCa,PWIconst->PSetNum-S0Index);
Integral_Ct=calcul(1800,tempCt,PWIconst->PSetNum-S0Index);
//if(s0[j].PixelData[TWO_D(k,l,PWIcommon->width)] != 0)//是否在mask内
PWICBV[j].PixelData[TWO_D(k,l,PWIcommon->width)]=Integral_Ct/Integral_Ca*k0*kav;
//else
// PWICBV[j].PixelData[TWO_D(k,l,PWIcommon->width)] = 0;
PWICBF[j].PixelData[TWO_D(k,l,PWIcommon->width)]= maxRt*k0*kav*60;
PWIMTT[j].PixelData[TWO_D(k,l,PWIcommon->width)] = maxRtt;
/*if(j==SelectSlice&&l==index_x&&k==index_y)
{
cout<<"MaxRt:"<<maxRt<<" PWICBF:"<<PWICBF[j].PixelData[TWO_D(k,l,PWIcommon->width)]<<" shu:"<<maxRt*k0*kav*60<<endl;
}*/
}
}
string s_mtt_tem = output+"bmpMTT/"+itos(j)+"_MTT.bmp";
string s_tmax_tem = output+"bmpTmax/"+itos(j)+"_Tmax.bmp";
string s_cbf_tem = output+"bmpCBF/"+itos(j)+"_CBF.bmp";
string s_cbv_tem = output+"bmpCBV/"+itos(j)+"_CBV.bmp";
//计算MTT
for(int i = 0 ; i < 128*128 ; ++i )
{
PWITmax[j].PixelData[i] = 60*PWICBV[j].PixelData[i]/PWICBF[j].PixelData[i];
}
//输出MTT
for(int i = 0 ; i < 128*128 ; ++i )
{
temPixel[i] = (Uint16)(PWITmax[j].PixelData[i]*10);
}
PWIinfo.fileformat.getDataset()->putAndInsertUint16Array(DCM_PixelData,temPixel,128*128);
PWIinfo.fileformat.saveFile((output+"Tmax/MTT_"+itos(j)).c_str(),EXS_LittleEndianExplicit);
//输出Tmax
for(int i = 0 ; i < 128*128 ; ++i )
{
temPixel[i] = (Uint16)(PWIMTT[j].PixelData[i]);
}
PWIinfo.fileformat.getDataset()->putAndInsertUint16Array(DCM_PixelData,temPixel,128*128);
PWIinfo.fileformat.saveFile((output+"MTT/MTT_"+itos(j+1)).c_str(),EXS_LittleEndianExplicit);
//输出CBF
for(int i = 0 ; i < 128*128 ; ++i )
{
temPixel[i] = (Uint16)(PWICBF[j].PixelData[i]*10);
}
PWIinfo.fileformat.getDataset()->putAndInsertUint16Array(DCM_PixelData,temPixel,128*128);
PWIinfo.fileformat.saveFile((output+"CBF/CBF_"+itos(j)).c_str(),EXS_LittleEndianExplicit);
//输出CBV
for(int i = 0 ; i < 128*128 ; ++i )
{
temPixel[i] = (Uint16)(PWICBV[j].PixelData[i]*100);
}
PWIinfo.fileformat.getDataset()->putAndInsertUint16Array(DCM_PixelData,temPixel,128*128);
PWIinfo.fileformat.saveFile((output+"CBV/CBV_"+itos(j)).c_str(),EXS_LittleEndianExplicit);
//write BMP
for(int i = 0 ; i < 128*128 ; ++i )
{
temPixel[i] = (Uint16)((PWICBV[j].PixelData[i]<=0?0:PWICBV[j].PixelData[i])*100);
}
toBmp(128,128,temPixel,s_cbv_tem.c_str(),0,500,s0[j].PixelData);
for(int i = 0 ; i < 128*128 ; ++i )
{
temPixel[i] = (Uint16)((PWICBF[j].PixelData[i]<=0?0:PWICBF[j].PixelData[i])*10);
}
toBmp(128,128,temPixel,s_cbf_tem.c_str(),0,400,s0[j].PixelData);
for(int i = 0 ; i < 128*128 ; ++i )
{
temPixel[i] = (Uint16)((PWIMTT[j].PixelData[i]<=0?0:PWIMTT[j].PixelData[i])*10);
}
toBmp(128,128,temPixel,s_tmax_tem.c_str(),0,120,s0[j].PixelData);
for(int i = 0 ; i < 128*128 ; ++i )
{
temPixel[i] = (Uint16)((PWITmax[j].PixelData[i]<=0?0:PWITmax[j].PixelData[i])*10);
}
toBmp(128,128,temPixel,s_mtt_tem.c_str(),0,160,s0[j].PixelData);
}
puts("PWI DONE");
return 0;
}
