示例#1
0
static void BAMReaderWhack(BAMReader *const self)
{
    KThreadCancel(self->th);
    KThreadWait(self->th, NULL);
    BAMFileRelease(self->file);
    KConditionRelease(self->need_data);
    KConditionRelease(self->have_data);
    KLockRelease(self->lock);
    KThreadRelease(self->th);
}
示例#2
0
rc_t BAMReaderMake( const BAMReader **result,
                    char const headerText[],
                    char const path[] )
{
    rc_t rc;
    BAMReader *self = malloc(sizeof(BAMReader));
    if ( self == NULL )
    {
        *result = NULL;
        return RC(rcAlign, rcFile, rcConstructing, rcMemory, rcExhausted);
    }
    else
    {
        atomic32_set( & self->refcount, 1 );
        rc = BAMFileMakeWithHeader( & self->file, headerText, "%s", path);
        if ( rc != 0 )
        {
            free(self);
            *result = 0;
        }
        else
            *result = self;
    }
    
    self->nque = 0;
    self->rc = 0;
    self->eof = false;
    
    rc = KLockMake(&self->lock);
    if (rc == 0) 
    {
        rc = KConditionMake(&self->have_data);
        if (rc == 0) 
        {
            rc = KConditionMake(&self->need_data);
            if (rc == 0) 
            {
                rc = KThreadMake(&self->th, BAMReaderThreadMain, self);
                if (rc == 0) 
                    return 0;
                KConditionRelease(self->need_data);
            }
            KConditionRelease(self->have_data);
        }
        KLockRelease(self->lock);
    }
    
    return rc;
}           
示例#3
0
/* Whack
 */
rc_t VCursorWhack ( VCursor *self )
{
#if VCURSOR_FLUSH_THREAD
    if ( self -> flush_thread != NULL )
    {
        rc_t rc = KLockAcquire ( self -> flush_lock );
        if ( rc == 0 )
        {
            while ( self -> flush_state == vfBusy )
            {
                MTCURSOR_DBG (( "VCursorWhack: waiting for thread to process\n" ));
                KConditionWait ( self -> flush_cond, self -> flush_lock );
            }
            self -> flush_state = vfExit;
            KConditionSignal ( self -> flush_cond );
            KLockUnlock ( self -> flush_lock );
        }

        MTCURSOR_DBG (( "VCursorWhack: waiting on thread to exit\n" ));
        KThreadWait ( self -> flush_thread, NULL );
    }

    MTCURSOR_DBG (( "VCursorWhack: finishing\n" ));
    KThreadRelease ( self -> flush_thread );
    KConditionRelease ( self -> flush_cond );
    KLockRelease ( self -> flush_lock );
#endif
    VCursorTerminatePagemapThread(self);
    return VCursorDestroy ( self );
}
示例#4
0
文件: sem.c 项目: ImAWolf/ncbi-vdb
/* Whack
 */
static
rc_t KSemaphoreWhack ( KSemaphore *self )
{
    rc_t rc;

    if ( self -> waiting != 0 )
        return RC ( rcPS, rcSemaphore, rcDestroying, rcSemaphore, rcBusy );

    rc = KConditionRelease ( self -> cond );
    if ( rc != 0 )
        return ResetRCContext ( rc, rcPS, rcSemaphore, rcDestroying );

    free ( self );
    return 0;
}