int MESH_CheckTopo(Mesh_ptr mesh) {
int valid = 1;
char mesg[256], funcname[32] = "MESH_CheckTopo";
int idx1, idx2, idx3, idx4;
MVertex_ptr mv;
MEdge_ptr me, ve, fe, re;
MFace_ptr mf, vf, ef, rf;
MRegion_ptr mr, vr, er, fr;
int found, done;
int dir;
int i, j, k;
int nfe;
int vid, eid, fid, rid;
int gvid, geid, gfid, grid;
int gvdim, gedim, gfdim, grdim;
int maxiter = 1000;
List_ptr vedges, vfaces, vregions;
List_ptr efaces;
List_ptr fverts, fedges, fregs, fregs1;
List_ptr rverts, redges, rfaces;
/*****************************************************************/
/* Vertices */
/*****************************************************************/
/* Check that edges connected to vertices reference the vertices */
/* Also check that the classification of the vertex is consistent
with respect to the edge */
int first_unknown_classfn = 1;
idx1 = 0;
while ((mv = MESH_Next_Vertex(mesh,&idx1))) {
#ifdef MSTK_HAVE_MPI
if (MV_PType(mv) == PGHOST) continue;
#endif
vid = MV_ID(mv);
gvdim = MV_GEntDim(mv);
gvid = MV_GEntID(mv);
if (gvdim == 4 && first_unknown_classfn) {
sprintf(mesg, "Vertex %-d - classification unknown\n", vid);
MSTK_Report(funcname, mesg, MSTK_WARN);
first_unknown_classfn = 0;
}
vedges = MV_Edges(mv);
if (!vedges) {
sprintf(mesg,"Vertex %-d does not have any connected edges\n",vid);
MSTK_Report(funcname,mesg,MSTK_WARN);
continue;
}
idx2 = 0;
while ((ve = List_Next_Entry(vedges,&idx2))) {
eid = ME_ID(ve);
if (ME_Vertex(ve,0) != mv && ME_Vertex(ve,1) != mv) {
sprintf(mesg,"Vertex %-d connected to edge %-d but edge does not use vertex",vid,eid);
MSTK_Report(funcname,mesg,MSTK_ERROR);
valid = 0;
}
}
if (gvdim == 1) {
/* If vertex is classified on a model edge, then it should be
connected to two and only two edges that are classified on
the same model edge */
int ne = 0;
idx2 = 0;
while ((ve = List_Next_Entry(vedges,&idx2))) {
gedim = ME_GEntDim(ve);
geid = ME_GEntID(ve);
if (gedim == 1 && geid == gvid) ne++;
}
if (ne != 2) {
sprintf(mesg,"Vertex %-d classified on model edge %-d but it is not \n connected to two edges classified on this model edge",vid,gvid);
MSTK_Report(funcname,mesg,MSTK_WARN);
}
}
List_Delete(vedges);
if (gvdim == 2) {
MEdge_ptr e0, ecur, enxt;
MFace_ptr fcur;
int flipped = 0;
/* If vertex is classified on a model face, then we should be
able to find a ring of faces classified on that model
face */
vfaces = MV_Faces(mv);
found = 0;
idx2 = 0;
while ((vf = List_Next_Entry(vfaces,&idx2))) {
if (MF_GEntDim(vf) == 2) {
found = 1;
break;
}
}
List_Delete(vfaces);
if (!found) {
sprintf(mesg,"Vertex %-d classified on model face %-d but could not \n find connected face classified on this model face",vid,gvid);
MSTK_Report(funcname,mesg,MSTK_WARN);
valid = 0;
}
fcur = vf;
fedges = MF_Edges(fcur,1,mv);
nfe = List_Num_Entries(fedges);
e0 = List_Entry(fedges,0);
ecur = e0;
enxt = List_Entry(fedges,nfe-1);
List_Delete(fedges);
done = 0; i = 0;
while (!done) {
ecur = enxt;
efaces = ME_Faces(ecur);
found = 0;
idx3 = 0;
while ((ef = List_Next_Entry(efaces,&idx3))) {
if (ef != fcur && MF_GEntDim(ef) == 2 && MF_GEntID(ef) == gvid) {
fcur = ef;
found = 1;
break;
}
}
List_Delete(efaces);
if (!found) {
sprintf(mesg,"Could not find next boundary face connected to vertex %-d",vid);
MSTK_Report(funcname,mesg,MSTK_WARN);
valid = 0;
break;
}
fedges = MF_Edges(fcur,1,mv);
nfe = List_Num_Entries(fedges);
if (List_Entry(fedges,0) == ecur)
enxt = List_Entry(fedges,nfe-1);
else if (List_Entry(fedges,nfe-1) == ecur) {
enxt = List_Entry(fedges,0);
flipped = 1;
}
else {
sprintf(mesg,"Could not find next edge while traversing around vertex %-d on model face %-d",vid,gvid);
MSTK_Report(funcname,mesg,MSTK_ERROR);
}
List_Delete(fedges);
if (enxt == e0)
done = 1;
if (++i > maxiter)
break;
}
if (!done) {
sprintf(mesg,"Vertex %-d classified on model face %-d but could not find ring of faces classified on this model face",vid,gvid);
MSTK_Report(funcname,mesg,MSTK_WARN);
}
if (done && flipped) {
List_ptr fregs = MF_Regions(fcur);
if (List_Num_Entries(fregs) < 2) {
sprintf(mesg,"Inconsistent orientations of boundary faces around vertex %-d",vid);
MSTK_Report(funcname,mesg,MSTK_WARN);
}
if (fregs) List_Delete(fregs);
}
}
} /* while ((mv = MESH_Next_Vertex(mesh,&idx1))) */
/*****************************************************************/
/* Edges */
/*****************************************************************/
first_unknown_classfn = 1;
idx1 = 0;
while ((me = MESH_Next_Edge(mesh,&idx1))) {
#ifdef MSTK_HAVE_MPI
if (ME_PType(me) == PGHOST) continue;
#endif
eid = ME_ID(me);
gedim = ME_GEntDim(me);
geid = ME_GEntID(me);
if (gedim == 4 && first_unknown_classfn) {
sprintf(mesg, "Edge %-d - unknown classification", eid);
MSTK_Report(funcname, mesg, MSTK_WARN);
first_unknown_classfn = 0;
}
if (ME_Vertex(me,0) == ME_Vertex(me,1)) {
sprintf(mesg,"Edge %-d has repeated vertices",eid);
MSTK_Report(funcname,mesg,MSTK_ERROR);
}
for (i = 0; i < 2; i++) {
MVertex_ptr ev = ME_Vertex(me,i);
vid = MV_ID(ev);
gvid = MV_GEntID(ev);
gvdim = MV_GEntDim(ev);
if (gvdim != 4 && gvdim != 4) { /* vertex and edge classifn is known */
if (gedim < gvdim) {
sprintf(mesg,"Edge %-d classified on lower dimensional entity than connected vertex %-d",eid,vid);
MSTK_Report(funcname,mesg,MSTK_WARN);
valid = 0;
}
else if (gedim == gvdim && geid != gvid) {
sprintf(mesg,"Edge %-d and its vertex %-d classified on different entities of the same dimension",eid,vid);
MSTK_Report(funcname,mesg,MSTK_WARN);
valid = 0;
}
}
vedges = MV_Edges(ev);
if (!List_Contains(vedges,me)) {
sprintf(mesg,"Edge %-d sees vertex %-d but not vice versa",eid,vid);
MSTK_Report(funcname,mesg,MSTK_ERROR);
valid = 0;
}
List_Delete(vedges);
if (gedim == 2) {
MFace_ptr ebf[2], fcur, fnxt;
MRegion_ptr rcur;
int nf, nfr;
List_ptr eregs;
/* Edge is classified on model face - it should be connected
to two and only two faces also classified on this model
face */
ebf[0] = ebf[1] = NULL;
nf = 0;
efaces = ME_Faces(me);
idx2 = 0;
while ((ef = List_Next_Entry(efaces,&idx2))) {
fid = MF_ID(ef);
if (MF_GEntDim(ef) == 2) {
nf++;
if (gedim == 2 && MF_GEntID(ef) != geid) {
sprintf(mesg,"Face %-d connected to edge %-d classified on different model face",fid,eid);
MSTK_Report(funcname,mesg,MSTK_WARN);
valid = 0;
}
if (ebf[0] == NULL)
ebf[0] = ef;
else
ebf[1] = ef;
}
}
List_Delete(efaces);
if (nf != 2) {
sprintf(mesg,"Boundary edge %-d is not connected to exactly two\n faces classified on the boundary",eid);
MSTK_Report(funcname,mesg,MSTK_ERROR);
valid = 0;
}
eregs = ME_Regions(me);
if (!eregs)
continue;
else
List_Delete(eregs);
/* Can we go from f0 to f1 in one or two dirs? */
fcur = ebf[0];
fnxt = NULL;
fregs = MF_Regions(fcur);
if (!fregs) {
fid = MF_ID(fcur);
sprintf(mesg,"Edge %-d connected to regions but face %-d is not",eid,fid);
MSTK_Report(funcname,mesg,MSTK_ERROR);
valid = 0;
}
nfr = List_Num_Entries(fregs);
for (i = 0; i < nfr; i++) {
rcur = List_Entry(fregs,i);
rfaces = MR_Faces(rcur);
idx3 = 0;
found = 0;
while ((rf = List_Next_Entry(rfaces,&idx3))) {
if (rf != fcur && MF_UsesEntity(rf,me,1)) {
found = 1;
fnxt = rf;
break;
}
}
List_Delete(rfaces);
if (!found) {
rid = MR_ID(rcur);
sprintf(mesg,"Could not find second face in region %-d using edge %-d",rid,eid);
}
done = 0; j = 0;
while (!done) {
fcur = fnxt;
fid = MF_ID(fcur);
if (fnxt == ebf[1]) {
done = 1;
break;
}
fregs1 = MF_Regions(fcur);
idx3 = 0;
while ((fr = List_Next_Entry(fregs1,&idx3))) {
if (fr != rcur) {
rcur = fr;
found = 1;
break;
}
}
List_Delete(fregs1);
if (!found) {
sprintf(mesg,"Could not find next region around edge %-d",eid);
MSTK_Report(funcname,mesg,MSTK_ERROR);
valid = 0;
break;
}
rfaces = MR_Faces(rcur);
idx3 = 0;
found = 0;
while ((rf = List_Next_Entry(rfaces,&idx3))) {
if (rf != fcur && MF_UsesEntity(rf,me,1)) {
found = 1;
fnxt = rf;
break;
}
}
List_Delete(rfaces);
if (!found) {
rid = MR_ID(rcur);
sprintf(mesg,"Could not find second face in region %-d using edge %-d",rid,eid);
}
if (++j > maxiter)
break;
} /* while (!done) */
if (!done) {
sprintf(mesg,"Could not traverse around edge %-d from face %-d to face %-d",eid,MF_ID(ebf[0]),MF_ID(ebf[1]));
MSTK_Report(funcname,mesg,MSTK_ERROR);
valid = 0;
}
} /* for (i = 0; i < nfr; i++) */
List_Delete(fregs);
} /* if (geid == 2) */
} /* for (i = 0; i < 2; i++) */
} /* while ((me = MESH_Next_Edge(mesh,&idx1))) */
/*****************************************************************/
/* Faces */
/*****************************************************************/
first_unknown_classfn = 1;
idx1 = 0;
while ((mf = MESH_Next_Face(mesh,&idx1))) {
#ifdef MSTK_HAVE_MPI
if (MF_PType(mf) == PGHOST) continue;
#endif
fid = MF_ID(mf);
gfid = MF_GEntID(mf);
gfdim = MF_GEntDim(mf);
if (gfdim == 4 && first_unknown_classfn) {
sprintf(mesg, "Face %-d - unknown classification", fid);
MSTK_Report(funcname, mesg, MSTK_WARN);
first_unknown_classfn = 0;
}
fedges = MF_Edges(mf,1,0);
if (List_Num_Entries(fedges) < 3) {
sprintf(mesg,"Face %-d has less than 3 edges",fid);
MSTK_Report(funcname,mesg,MSTK_ERROR);
}
idx2 = 0;
while ((fe = List_Next_Entry(fedges,&idx2))) {
eid = ME_ID(fe);
geid = ME_GEntID(fe);
gedim = ME_GEntDim(fe);
if (gedim != 4 && gfdim != 4) { /* Edge, Face classfn is known */
if (gfdim < gedim) {
sprintf(mesg,"Face %-d classified on lower order entity than edge %-d",fid,ME_ID(fe));
MSTK_Report(funcname,mesg,MSTK_WARN);
valid = 0;
}
else if (gedim == gfdim && geid != gfid) {
sprintf(mesg,"Face %-d and edge %-d classified on different\n entities of the same dimension",fid,eid);
MSTK_Report(funcname,mesg,MSTK_WARN);
}
}
efaces = ME_Faces(fe);
if (!List_Contains(efaces,mf)) {
sprintf(mesg,"Face %-d refers to edge %-d but not vice versa",fid,ME_ID(fe));
MSTK_Report(funcname,mesg,MSTK_ERROR);
valid = 0;
}
List_Delete(efaces);
}
List_Delete(fedges);
fregs = MF_Regions(mf);
if (gfdim == 3) {
if (!fregs || List_Num_Entries(fregs) != 2) {
sprintf(mesg,"Interior face %-d does not have two connected regions",fid);
MSTK_Report(funcname,mesg,MSTK_ERROR);
valid = 0;
}
}
if (fregs) {
if (List_Num_Entries(fregs) == 2) {
if (MR_FaceDir(List_Entry(fregs,0),mf) == MR_FaceDir(List_Entry(fregs,1),mf)) {
sprintf(mesg,"Both regions using face %-d in the same sense",fid);
MSTK_Report(funcname,mesg,MSTK_ERROR);
valid = 0;
}
}
List_Delete(fregs);
}
} /* while ((mf = MESH_Next_Face(mesh,&idx1))) */
/*****************************************************************/
/* Regions */
/*****************************************************************/
idx1 = 0;
while ((mr = MESH_Next_Region(mesh,&idx1))) {
#ifdef MSTK_HAVE_MPI
if (MR_PType(mr) == PGHOST) continue;
#endif
rid = MR_ID(mr);
grid = MR_GEntID(mr);
rfaces = MR_Faces(mr);
int nrf = List_Num_Entries(rfaces);
if (nrf < 4) {
sprintf(mesg,"Region %-d has less than 4 faces",rid);
MSTK_Report(funcname,mesg,MSTK_ERROR);
}
/* Check that face to region and region to face links are consistent
with each other */
int *rfdirs = (int *) malloc(nrf*sizeof(int));
i = 0;
idx2 = 0;
while ((rf = List_Next_Entry(rfaces,&idx2))) {
rfdirs[i] = MR_FaceDir_i(mr,i);
if (mr != MF_Region(rf,!rfdirs[i])) {
sprintf(mesg,"Region %-d to face %-d dir inconsistent with \n face to region dir",rid,MF_ID(rf));
MSTK_Report(funcname,mesg,MSTK_ERROR);
valid = 0;
}
i++;
}
/* Check that faces of a region have consistent orientation in
the region with respect to each other */
for (i = 0; i < nrf; i++) {
MFace_ptr rf, rf2;
rf = List_Entry(rfaces,i);
fedges = MF_Edges(rf,1,0);
nfe = List_Num_Entries(fedges);
for (j = 0; j < nfe; j++) {
fe = List_Entry(fedges,j);
int fedir = MF_EdgeDir_i(rf,j);
/* Find adjacent face in the region */
found = 0;
for (k = 0; k < nrf; k++) {
rf2 = List_Entry(rfaces,k);
if (rf != rf2 && MF_UsesEntity(rf2,fe,MEDGE)) {
found = 1;
break;
}
}
if (!found) {
sprintf(mesg,"Cannot find another face in region %-d sharing edge %-d (ID = %-d) of face with ID = %-d",MR_ID(mr),j,ME_ID(fe),MF_ID(rf));
MSTK_Report(funcname,mesg,MSTK_ERROR);
valid = 0;
}
int fedir_adj = MF_EdgeDir(rf2,fe);
/* If the two faces use the edge in opposite directions then
the region should use the faces in the same direction and
vice versa */
if (((fedir_adj == fedir) && (rfdirs[i] == rfdirs[k])) ||
((fedir_adj != fedir) && (rfdirs[i] != rfdirs[k]))) {
sprintf(mesg,"Region %-d faces are inconsistently oriented",MR_ID(mr));
MSTK_Report(funcname,mesg,MSTK_ERROR);
valid = 0;
}
}
List_Delete(fedges);
}
List_Delete(rfaces);
free(rfdirs);
}
return valid;
} /* int MESH_CheckTopo */
MVertex_ptr ME_Split_SimplexMesh(MEdge_ptr esplit, double *splitxyz) {
int i, j, k, rfdir, ntets=0, ntris=0, *fdim, *fid, *rid=NULL, found;
MVertex_ptr vsplit, ev[2], (*tetverts)[4]=NULL, (*triverts)[3]=NULL, fv;
MVertex_ptr fvarr[3], rvarr[4];
MFace_ptr f;
MRegion_ptr r;
List_ptr etets, rfaces, etris, fverts;
Mesh_ptr mesh = ME_Mesh(esplit);
ev[0] = ME_Vertex(esplit,0);
ev[1] = ME_Vertex(esplit,1);
etets = ME_Regions(esplit);
if (etets) {
ntets = List_Num_Entries(etets);
tetverts = (MVertex_ptr (*)[4]) malloc(ntets*sizeof(MVertex_ptr [4]));
rid = (int *) malloc(ntets*sizeof(int));
}
for (i = 0; i < ntets; i++) {
r = List_Entry(etets,i);
rfaces = MR_Faces(r);
/* Find a tet face that uses ev[0] but not ev[1] */
found = 0;
for (j = 0; !found && j < 4; j++) {
f = List_Entry(rfaces,j);
fverts = MF_Vertices(f,1,0);
if (List_Contains(fverts,ev[0]) &&
!List_Contains(fverts,ev[1])) {
found = 1;
/* Get the two vertices (a,b) of this face excluding ev[0] in
such an order that ev[0],a,b,ev[1] will form a valid
tet. This requires checking whether the face points into or
out of this tet (look at rfdir) */
rfdir = MR_FaceDir_i(r,j);
for (k = 0; k < 3; k++) {
fv = List_Entry(fverts,k);
if (fv == ev[0]) {
tetverts[i][0] = ev[0];
tetverts[i][1] = rfdir ? List_Entry(fverts,(k+2)%3) : List_Entry(fverts,(k+1)%3);
tetverts[i][2] = rfdir ? List_Entry(fverts,(k+1)%3) : List_Entry(fverts,(k+2)%3);
tetverts[i][3] = ev[1];
}
}
}
List_Delete(fverts);
if (found) break;
}
List_Delete(rfaces);
}
/* Now that we finished collecting info about the connected tets we
can delete them */
if (etets) {
for (i = 0; i < ntets; i++)
MR_Delete(List_Entry(etets,i),0);
List_Delete(etets);
}
/* Now get the triangular face connected to the edge. For each
triangular face, record the vertex opposite to edge esplit and
delete the triangular face */
etris = ME_Faces(esplit);
if (etris) {
ntris = List_Num_Entries(etris);
triverts = (MVertex_ptr (*)[3]) malloc(ntris*sizeof(MVertex_ptr[3]));
fdim = (int *) malloc(ntris*sizeof(int));
fid = (int *) malloc(ntris*sizeof(int));
}
for (i = 0; i < ntris; i++) {
f = List_Entry(etris,i);
fverts = MF_Vertices(f,1,0);
for (j = 0; j < 3; j++) {
fv = List_Entry(fverts,j);
if (fv != ev[0] && fv != ev[1]) {
triverts[i][0] = fv;
triverts[i][1] = List_Entry(fverts,(j+1)%3);
triverts[i][2] = List_Entry(fverts,(j+2)%3);
fdim[i] = MF_GEntDim(f);
fid[i] = MF_GEntID(f);
break;
}
}
List_Delete(fverts);
MF_Delete(f,0);
}
if (etris) List_Delete(etris);
/* Now split the edge itself */
vsplit = ME_Split(esplit, splitxyz);
/* Now for each tri face that we deleted, create two tri faces that
incorporate the split vertex, one of the split edge vertices and
opposite vertex */
for (i = 0; i < ntris; i++) {
/* First triangle */
fvarr[0] = triverts[i][0];
fvarr[1] = triverts[i][1];
fvarr[2] = vsplit;
f = MF_New(mesh);
MF_Set_Vertices(f,3,fvarr);
MF_Set_GEntDim(f,fdim[i]);
MF_Set_GEntID(f,fid[i]);
/* Second triangle */
fvarr[0] = triverts[i][0];
fvarr[1] = vsplit;
fvarr[2] = triverts[i][2];
f = MF_New(mesh);
MF_Set_Vertices(f,3,fvarr);
MF_Set_GEntDim(f,fdim[i]);
MF_Set_GEntID(f,fid[i]);
}
if (ntris) {
free(triverts);
free(fdim);
free(fid);
}
/* Now for each tet that we deleted, create two tets (these will use
the split faces that are already created */
for (i = 0; i < ntets; i++) {
rvarr[0] = vsplit;
rvarr[1] = tetverts[i][2];
rvarr[2] = tetverts[i][1];
rvarr[3] = tetverts[i][0];
r = MR_New(mesh);
MR_Set_Vertices(r,4,rvarr,0,NULL);
MR_Set_GEntID(r,rid[i]);
rvarr[0] = vsplit;
rvarr[1] = tetverts[i][1];
rvarr[2] = tetverts[i][2];
rvarr[3] = tetverts[i][3];
r = MR_New(mesh);
MR_Set_Vertices(r,4,rvarr,0,NULL);
MR_Set_GEntID(r,rid[i]);
}
if (ntets) {
free(tetverts);
free(rid);
}
return vsplit;
}
int MESH_ConcatSubMesh_Region(Mesh_ptr mesh, int num, Mesh_ptr *submeshes) {
int nrf, nre, nrv, nfe, i, j, k, num_parbndry_verts, num_parbndry_edges, num_parbndry_faces, ival;
MVertex_ptr mv, new_mv, sub_mv;
MEdge_ptr me, new_me, sub_me;
MFace_ptr mf, new_mf, sub_mf;
MRegion_ptr new_mr, sub_mr;
List_ptr mrfaces, mredges, mrverts, mfedges;
int add_region, idx, global_id, iloc, *loc;
double coor[3], rval;
void *pval;
Mesh_ptr submesh;
List_ptr parbndry_verts = List_New(10);
List_ptr parbndry_edges = List_New(10);
List_ptr parbndry_faces = List_New(10);
MFace_ptr *rfaces = (MFace_ptr *) malloc(MAXPF3*sizeof(MFace_ptr));
int *rfdirs = (int *) malloc(MAXPF3*sizeof(int));
MEdge_ptr *fedges = (MEdge_ptr *) malloc(MAXPV2*sizeof(MEdge_ptr));
int *fedirs = (int *) malloc(MAXPV2*sizeof(int));
MAttrib_ptr parbndryatt = MAttrib_New(mesh, "on_parbndry", INT, MVERTEX);
/* collect faces, edges and vertices on the partition boundary */
idx = 0; num_parbndry_faces = 0;
while ((mf = MESH_Next_Face(mesh,&idx)))
if (MF_PType(mf) != PINTERIOR) {
List_Add(parbndry_faces,mf);
num_parbndry_faces++;
}
idx = 0; num_parbndry_edges = 0;
while ((me = MESH_Next_Edge(mesh,&idx)))
if (ME_PType(me) != PINTERIOR) {
List_Add(parbndry_edges,me);
num_parbndry_edges++;
}
idx = 0; num_parbndry_verts = 0;
while ((mv = MESH_Next_Vertex(mesh,&idx)))
if (MV_PType(mv) != PINTERIOR) {
List_Add(parbndry_verts,mv);
MEnt_Set_AttVal(mv, parbndryatt, 1, 0.0, NULL);
num_parbndry_verts++;
}
/* sort based on global ID */
List_Sort(parbndry_faces,num_parbndry_faces,sizeof(MFace_ptr),compareGlobalID);
List_Sort(parbndry_edges,num_parbndry_edges,sizeof(MEdge_ptr),compareGlobalID);
List_Sort(parbndry_verts,num_parbndry_verts,sizeof(MVertex_ptr),compareGlobalID);
int *parbndry_vert_gids = (int *)malloc(num_parbndry_verts*sizeof(int));
int *parbndry_edge_gids = (int *)malloc(num_parbndry_edges*sizeof(int));
int *parbndry_face_gids = (int *)malloc(num_parbndry_faces*sizeof(int));
/* store them in array for binary search */
for (i = 0; i < num_parbndry_faces; i++) {
mf = List_Entry(parbndry_faces,i);
parbndry_face_gids[i] = MF_GlobalID(mf);
}
for (i = 0; i < num_parbndry_edges; i++) {
me = List_Entry(parbndry_edges,i);
parbndry_edge_gids[i] = ME_GlobalID(me);
}
for (i = 0; i < num_parbndry_verts; i++) {
mv = List_Entry(parbndry_verts,i);
parbndry_vert_gids[i] = MV_GlobalID(mv);
}
/* Make list of new edges and vertices which will be updated
with each mesh that is concatenated */
int max_vnew = 0, max_enew = 0, max_fnew = 0;
for (i = 0; i < num; i++) {
max_vnew += MESH_Num_Vertices(submeshes[i]);
max_enew += MESH_Num_Edges(submeshes[i]);
max_fnew += MESH_Num_Faces(submeshes[i]);
}
int num_new_verts = 0, num_new_edges = 0, num_new_faces = 0;
int *new_vert_gids = (int *) malloc(max_vnew*sizeof(int));
int *new_edge_gids = (int *) malloc(max_enew*sizeof(int));
int *new_face_gids = (int *) malloc(max_fnew*sizeof(int));
List_ptr new_verts = List_New(max_vnew);
List_ptr new_edges = List_New(max_enew);
List_ptr new_faces = List_New(max_fnew);
/* Now process each mesh and add a layer of ghost elements from
each of them to the main partition */
for (i = 0; i < num; i++) {
submesh = submeshes[i];
MAttrib_ptr vidatt = MAttrib_New(submesh, "tempvid", POINTER, MVERTEX);
MAttrib_ptr eidatt = MAttrib_New(submesh, "tempeid", POINTER, MEDGE);
MAttrib_ptr fidatt = MAttrib_New(submesh, "tempfid", POINTER, MFACE);
idx = 0;
while ((sub_mr = MESH_Next_Region(submesh, &idx))) {
add_region = 0;
/* Find matching vertices between submesh and main mesh */
mrverts = MR_Vertices(sub_mr);
nrv = List_Num_Entries(mrverts);
for (j = 0; j < nrv; j++) {
sub_mv = List_Entry(mrverts,j);
MEnt_Get_AttVal(sub_mv, &vidatt, &ival, &rval, &mv);
if (mv) {
int on_parbndry=0;
MEnt_Get_AttVal(mv, &parbndryatt, &on_parbndry, &rval, &pval);
if (on_parbndry)
add_region = 1;
} else {
/* Does the global ID of this vertex of the sub mesh region
* match the global ID of a boundary vertex in the main
* mesh? */
global_id = MV_GlobalID(sub_mv);
loc = (int *) bsearch(&global_id, parbndry_vert_gids, num_parbndry_verts, sizeof(int),
compareINT);
if (loc) {
add_region = 1;
iloc = loc - parbndry_vert_gids;
mv = List_Entry(parbndry_verts,iloc);
/* here set the ghost vertex property, only necessary when the input submeshes are not consistent */
if(MV_PType(mv) == PGHOST && MV_PType(sub_mv) != PGHOST) {
MV_Set_GEntDim(mv,MV_GEntDim(sub_mv));
MV_Set_GEntID(mv,MV_GEntID(sub_mv));
}
MEnt_Set_AttVal(sub_mv, vidatt, 0, 0.0, mv);
}
}
}
List_Delete(mrverts);
/* Find matching edges between submesh and main mesh */
mredges = MR_Edges(sub_mr);
nre = List_Num_Entries(mredges);
for (j = 0; j < nre; j++) {
sub_me = List_Entry(mredges,j);
/* Does the edge already have a counterpart in the main mesh? */
MEnt_Get_AttVal(sub_me, eidatt, &ival, &rval, &me);
if (!me) {
/* Does the global ID of this edge of the sub mesh region
* match the global ID of a boundary edge in the main
* mesh? */
global_id = ME_GlobalID(sub_me);
loc = (int *) bsearch(&global_id, parbndry_edge_gids, num_parbndry_edges, sizeof(int),
compareINT);
if (loc) {
add_region = 1;
iloc = loc - parbndry_edge_gids;
me = List_Entry(parbndry_edges,iloc);
/* here set the ghost edge property, only necessary when the input submeshes are not consistent */
if(ME_PType(me) == PGHOST && ME_PType(sub_me) != PGHOST) {
ME_Set_GEntDim(me,ME_GEntDim(sub_me));
ME_Set_GEntID(me,ME_GEntID(sub_me));
}
MEnt_Set_AttVal(sub_me, eidatt, 0, 0.0, me);
}
}
}
List_Delete(mredges);
/* Find matching faces between submesh and main mesh */
mrfaces = MR_Faces(sub_mr);
nrf = List_Num_Entries(mrfaces);
for (j = 0; j < nrf; j++) {
sub_mf = List_Entry(mrfaces,j);
MEnt_Get_AttVal(sub_mf, fidatt, &ival, &rval, &mf);
if (!mf) {
/* Does the global ID of this face of the sub mesh region
* match the global ID of a boundary face in the main
* mesh? */
global_id = MF_GlobalID(sub_mf);
loc = (int *) bsearch(&global_id, parbndry_face_gids, num_parbndry_faces, sizeof(int),
compareINT);
if (loc) {
iloc = loc - parbndry_face_gids;
mf = List_Entry(parbndry_faces,iloc);
/* here set the ghost edge property, only necessary when the input submeshes are not consistent */
if (MF_PType(mf) == PGHOST && MF_PType(sub_mf) != PGHOST) {
MF_Set_GEntDim(mf,MF_GEntDim(sub_mf));
MF_Set_GEntID(mf,MF_GEntID(sub_mf));
}
MEnt_Set_AttVal(sub_mf, fidatt, 0, 0.0, mf);
}
}
}
if (!add_region) {
List_Delete(mrfaces);
continue;
}
new_mr = MR_New(mesh); /* add region */
MR_Set_GEntDim(new_mr,MR_GEntDim(sub_mr));
MR_Set_GEntID(new_mr,MR_GEntID(sub_mr));
MR_Set_PType(new_mr,PGHOST);
MR_Set_MasterParID(new_mr,MR_MasterParID(sub_mr));
MR_Set_GlobalID(new_mr,MR_GlobalID(sub_mr));
nrf = List_Num_Entries(mrfaces);
int i2;
for(i2 = 0; i2 < nrf; i2++) {
sub_mf = List_Entry(mrfaces,i2);
global_id = MF_GlobalID(sub_mf);
rfdirs[i2] = MR_FaceDir_i(sub_mr,i2) == 1 ? 1 : 0;
new_mf = NULL;
MEnt_Get_AttVal(sub_mf, fidatt, &ival, &rval, &new_mf);
if (!new_mf) {
/* search in the ghost layer if another face with
* this global ID has been added */
loc = (int *) bsearch(&global_id, new_face_gids, num_new_faces,
sizeof(int), compareINT);
if (loc) {
iloc = loc - new_face_gids;
new_mf = List_Entry(new_faces, iloc);
MEnt_Set_AttVal(sub_mf, fidatt, 0, 0.0, new_mf);
}
}
if (new_mf) {
List_ptr mfverts = MF_Vertices(sub_mf,1,0);
int fvgid0[2];
fvgid0[0] = MF_GlobalID(List_Entry(mfverts,0));
fvgid0[1] = MF_GlobalID(List_Entry(mfverts,1));
List_Delete(mfverts);
mfverts = MF_Vertices(new_mf,1,0);
int nfv = List_Num_Entries(mfverts);
int fvgid1[MAXPV2];
for (j = 0; j < nfv; j++)
fvgid1[j] = MF_GlobalID(List_Entry(mfverts,j));
List_Delete(mfverts);
for (j = 0; j < nfv; j++) {
if (fvgid1[j] == fvgid0[0]) {
if (fvgid1[(j+nfv-1)%nfv] == fvgid0[1]) /* reverse dir */
rfdirs[i2] = !rfdirs[i2];
break;
}
}
}
else { /* add a new face to main mesh */
new_mf = MF_New(mesh); /* add face */
MF_Set_GEntDim(new_mf,MF_GEntDim(sub_mf));
MF_Set_GEntID(new_mf,MF_GEntID(sub_mf));
MF_Set_PType(new_mf,PGHOST);
MF_Set_MasterParID(new_mf,MF_MasterParID(sub_mf));
MF_Set_GlobalID(new_mf,MF_GlobalID(sub_mf));
MEnt_Set_AttVal(sub_mf, fidatt, 0, 0.0, new_mf);
List_Add(new_faces, new_mf);
mfedges = MF_Edges(sub_mf,1,0);
nfe = List_Num_Entries(mfedges);
for(j = 0; j < nfe; j++) {
sub_me = List_Entry(mfedges,j);
global_id = ME_GlobalID(sub_me);
fedirs[j] = MF_EdgeDir_i(sub_mf,j) == 1 ? 1 : 0;
new_me = NULL;
MEnt_Get_AttVal(sub_me, eidatt, &ival, &rval, &new_me);
if (!new_me) {
/* search in the ghost layer if another edge with
* this global ID has been added */
loc = (int *) bsearch(&global_id, new_edge_gids, num_new_edges,
sizeof(int), compareINT);
if (loc) {
iloc = loc - new_edge_gids;
new_me = List_Entry(new_edges, iloc);
MEnt_Set_AttVal(sub_me, eidatt, 0, 0.0, new_me);
}
}
if (new_me) {
if(MV_GlobalID(ME_Vertex(new_me,0)) != MV_GlobalID(ME_Vertex(sub_me,0)))
fedirs[j] = 1 - fedirs[j]; /* if the edge dir is not the same, reverse the edge dir */
} else { /* add a new edge to main mesh */
new_me = ME_New(mesh); /* add new edge and copy information */
ME_Set_GEntDim(new_me,ME_GEntDim(sub_me));
ME_Set_GEntID(new_me,ME_GEntID(sub_me));
ME_Set_PType(new_me,PGHOST);
ME_Set_MasterParID(new_me,ME_MasterParID(sub_me));
ME_Set_GlobalID(new_me,ME_GlobalID(sub_me));
MEnt_Set_AttVal(sub_me, eidatt, 0, 0.0, new_me);
List_Add(new_edges, new_me);
for(k = 0; k < 2; k++) {
sub_mv = ME_Vertex(sub_me,k);
global_id = MV_GlobalID(sub_mv);
new_mv = NULL;
MEnt_Get_AttVal(sub_mv, vidatt, &ival, &rval, &new_mv);
if (!new_mv) {
/* search in the ghost layer if another vertex with
* this global ID has been added */
loc = (int *) bsearch(&global_id, new_vert_gids, num_new_verts,
sizeof(int), compareINT);
if (loc) {
iloc = loc - new_vert_gids;
new_mv = List_Entry(new_verts, iloc);
MEnt_Set_AttVal(sub_mv, vidatt, 0, 0.0, new_mv);
}
}
if (!new_mv) { /* add new vertex to main mesh */
new_mv = MV_New(mesh); /* add new vertex and copy information */
MV_Set_GEntDim(new_mv,MV_GEntDim(sub_mv));
MV_Set_GEntID(new_mv,MV_GEntID(sub_mv));
MV_Set_PType(new_mv,PGHOST);
MV_Set_MasterParID(new_mv,MV_MasterParID(sub_mv));
MV_Set_GlobalID(new_mv,MV_GlobalID(sub_mv));
MV_Coords(sub_mv,coor);
MV_Set_Coords(new_mv,coor);
MEnt_Set_AttVal(sub_mv, vidatt, 0, 0.0, new_mv);
List_Add(new_verts, new_mv);
}
ME_Set_Vertex(new_me,k,new_mv); /* set edge-vertex */
}
}
fedges[j] = new_me;
}
MF_Set_Edges(new_mf,nfe,fedges,fedirs); /* set face-edge */
List_Delete(mfedges);
}
rfaces[i2] = new_mf;
}
MR_Set_Faces(new_mr,nrf,rfaces,rfdirs); /* set region-face */
List_Delete(mrfaces);
}
idx = 0;
while ((sub_mv = MESH_Next_Vertex(submesh, &idx)))
MEnt_Rem_AttVal(sub_mv, vidatt);
MAttrib_Delete(vidatt);
idx = 0;
while ((sub_me = MESH_Next_Edge(submesh, &idx)))
MEnt_Rem_AttVal(sub_me, eidatt);
MAttrib_Delete(eidatt);
idx = 0;
while ((sub_mf = MESH_Next_Face(submesh, &idx)))
MEnt_Rem_AttVal(sub_mf, fidatt);
MAttrib_Delete(fidatt);
/* Sort the added entity lists by GlobalID */
num_new_faces = List_Num_Entries(new_faces);
List_Sort(new_faces, num_new_faces, sizeof(MFace_ptr), compareGlobalID);
for (j = 0; j < num_new_faces; j++)
new_face_gids[j] = MF_GlobalID(List_Entry(new_faces, j));
num_new_edges = List_Num_Entries(new_edges);
List_Sort(new_edges, num_new_edges, sizeof(MEdge_ptr), compareGlobalID);
for (j = 0; j < num_new_edges; j++)
new_edge_gids[j] = ME_GlobalID(List_Entry(new_edges, j));
num_new_verts = List_Num_Entries(new_verts);
List_Sort(new_verts, num_new_verts, sizeof(MVertex_ptr), compareGlobalID);
for (j = 0; j < num_new_verts; j++)
new_vert_gids[j] = MV_GlobalID(List_Entry(new_verts, j));
}
idx = 0;
while ((mv = List_Next_Entry(parbndry_verts, &idx)))
MEnt_Rem_AttVal(mv, parbndryatt);
MAttrib_Delete(parbndryatt);
List_Delete(parbndry_faces);
List_Delete(parbndry_edges);
List_Delete(parbndry_verts);
List_Delete(new_faces);
List_Delete(new_edges);
List_Delete(new_verts);
free(parbndry_vert_gids);
free(parbndry_edge_gids);
free(parbndry_face_gids);
free(new_face_gids);
free(new_edge_gids);
free(new_vert_gids);
free(fedges);
free(fedirs);
free(rfaces);
free(rfdirs);
return 1;
}
int MESH_WriteToFile(Mesh_ptr mesh, const char *filename, RepType rtype, MSTK_Comm comm) {
FILE *fp;
char mesg[80], attname[256];
int i, j, k, idx;
int gdim, gid;
int mvid, mvid0, mvid1, mvid2, mrid2, meid, mfid, mrid;
int nav, nar, nfe, nfv, nrf, nrv, dir=0;
int nv, ne, nf, nr;
int natt, ncomp, ival, nent;
double xyz[3], rval, rdummy, *rval_arr;
void *pval, *pdummy;
MVertex_ptr mv, mv0, mv1, mv2;
MEdge_ptr me;
MFace_ptr mf;
MRegion_ptr mr, mr2;
List_ptr adjverts, mfedges, mfverts, mrfaces, mrverts, adjregs;
RepType reptype;
MAttrib_ptr attrib, vidatt, eidatt, fidatt, ridatt;
MType attentdim;
MAttType atttype;
char modfilename[256];
strcpy(modfilename, filename);
int rank = 0, numprocs = 1;
#ifdef MSTK_HAVE_MPI
if (comm) {
MPI_Comm_size((MPI_Comm)comm, &numprocs);
MPI_Comm_rank((MPI_Comm)comm, &rank);
}
if (numprocs > 1) {
int ndigits = 0;
int div = 1;
while (numprocs/div) {div *= 10; ndigits++;}
sprintf(modfilename,"%s.%d.%0*d",filename,numprocs,ndigits,rank);
}
#endif
if (!(fp = fopen(modfilename,"w"))) {
sprintf(mesg,"Cannot open file %-s for writing",modfilename);
MSTK_Report("MESH_WriteToFile",mesg,MSTK_ERROR);
return 0;
}
if (rtype != UNKNOWN_REP) {
reptype = rtype;
}
else {
reptype = MESH_RepType(mesh);
}
nv = MESH_Num_Vertices(mesh);
ne = MESH_Num_Edges(mesh);
nf = MESH_Num_Faces(mesh);
nr = MESH_Num_Regions(mesh);
fprintf(fp,"MSTK %-2.1lf\n",MSTK_FILE_VER);
fprintf(fp,"%s %d %d %d %d\n",
MESH_rtype_str[reptype],
nv,
(reptype >= R1 && reptype <= R4)?0:ne,
(reptype >= R1 && reptype <= R2 && nr)?0:nf,
nr);
vidatt = MAttrib_New(mesh,"vidatt",INT,MVERTEX);
eidatt = MAttrib_New(mesh,"eidatt",INT,MEDGE);
fidatt = MAttrib_New(mesh,"fidatt",INT,MFACE);
ridatt = MAttrib_New(mesh,"ridatt",INT,MREGION);
idx = 0; i = 0;
while ((mv = MESH_Next_Vertex(mesh,&idx)))
MEnt_Set_AttVal(mv,vidatt,++i,0.0,NULL);
idx = 0; i = 0;
while ((me = MESH_Next_Edge(mesh,&idx)))
MEnt_Set_AttVal(me,eidatt,++i,0.0,NULL);
idx = 0; i = 0;
while ((mf = MESH_Next_Face(mesh,&idx)))
MEnt_Set_AttVal(mf,fidatt,++i,0.0,NULL);
idx = 0; i = 0;
while ((mr = MESH_Next_Region(mesh,&idx)))
MEnt_Set_AttVal(mr,ridatt,++i,0.0,NULL);
fprintf(fp,"vertices\n");
idx = 0;
while ((mv = MESH_Next_Vertex(mesh,&idx))) {
MV_Coords(mv,xyz);
gdim = MV_GEntDim(mv);
gid = MV_GEntID(mv);
fprintf(fp,"%24.16lf %24.16lf %24.16lf %d %d\n",
xyz[0],xyz[1],xyz[2],gdim,gid);
}
if (reptype == R2 || reptype == R4) {
fprintf(fp,"adjvertices\n");
idx = 0;
while ((mv = MESH_Next_Vertex(mesh,&idx))) {
nav = MV_Num_AdjVertices(mv);
fprintf(fp,"%d ",nav);
adjverts = MV_AdjVertices(mv);
for (j = 0; j < nav; j++) {
mv2 = List_Entry(adjverts,j);
MEnt_Get_AttVal(mv2,vidatt,&mvid2,&rval,&pval);
fprintf(fp,"%d ",mvid2);
}
fprintf(fp,"\n");
List_Delete(adjverts);
}
}
if (reptype <= F4 && ne) {
fprintf(fp,"edges\n");
idx = 0;
while ((me = MESH_Next_Edge(mesh,&idx))) {
mv0 = ME_Vertex(me,0);
MEnt_Get_AttVal(mv0,vidatt,&mvid0,&rval,&pval);
mv1 = ME_Vertex(me,1);
MEnt_Get_AttVal(mv1,vidatt,&mvid1,&rval,&pval);
gdim = ME_GEntDim(me);
gid = ME_GEntID(me);
fprintf(fp,"%d %d \t%d %d\n",mvid0,mvid1,gdim,gid);
}
}
if (reptype <= F4) {
/* For full representations, always write out faces in terms of edges */
fprintf(fp,"faces edge\n");
idx = 0;
while ((mf = MESH_Next_Face(mesh,&idx))) {
nfe = MF_Num_Edges(mf);
fprintf(fp,"%d ",nfe);
mfedges = MF_Edges(mf,1,0);
for (j = 0; j < nfe; j++) {
me = List_Entry(mfedges,j);
dir = MF_EdgeDir_i(mf,j);
MEnt_Get_AttVal(me,eidatt,&meid,&rval,&pval);
if (dir != 1) meid = -meid;
fprintf(fp,"%d ",meid);
}
List_Delete(mfedges);
gdim = MF_GEntDim(mf);
/*
gent = MF_GEntity(mf);
gid = gent ? -99 : 0;
*/
gid = MF_GEntID(mf);
fprintf(fp,"\t%d %d\n",gdim,gid);
}
}
else {
/* For reduced representations, R3 and R4 always write out faces
in terms of vertices. For reduced representations, R1 and R2
write out faces in terms of vertices only when there are no
regions (i.e. faces are the highest level mesh entities) */
if ((reptype > R2) || (nr == 0)) {
fprintf(fp,"faces vertex\n");
idx = 0;
while ((mf = MESH_Next_Face(mesh,&idx))) {
nfv = MF_Num_Edges(mf);
fprintf(fp,"%d ",nfv);
mfverts = MF_Vertices(mf,1,0);
for (j = 0; j < nfv; j++) {
mv = List_Entry(mfverts,j);
MEnt_Get_AttVal(mv,vidatt,&mvid,&rval,&pval);
fprintf(fp,"%d ",mvid);
}
List_Delete(mfverts);
gdim = MF_GEntDim(mf);
gid = MF_GEntID(mf);
fprintf(fp,"\t%d %d\n",gdim,gid);
}
}
}
if (nr) {
if (reptype <= F4 || reptype >= R2) {
fprintf(fp,"regions face\n");
idx = 0;
while ((mr = MESH_Next_Region(mesh,&idx))) {
nrf = MR_Num_Faces(mr);
fprintf(fp,"%d ",nrf);
mrfaces = MR_Faces(mr);
for (j = 0; j < nrf; j++) {
mf = List_Entry(mrfaces,j);
dir = MR_FaceDir_i(mr,j);
MEnt_Get_AttVal(mf,fidatt,&mfid,&rval,&pval);
if (dir != 1) mfid = -mfid;
fprintf(fp,"%d ",mfid);
}
List_Delete(mrfaces);
gdim = MF_GEntDim(mr);
gid = MR_GEntID(mr);
fprintf(fp,"\t%d %d\n",gdim,gid);
}
}
else {
fprintf(fp,"regions vertex\n");
idx = 0;
while ((mr = MESH_Next_Region(mesh,&idx))) {
nrv = MR_Num_Vertices(mr);
fprintf(fp,"%d ",nrv);
mrverts = MR_Vertices(mr);
for (j = 0; j < nrv; j++) {
mv = List_Entry(mrverts,j);
MEnt_Get_AttVal(mv,vidatt,&mvid,&rval,&pval);
fprintf(fp,"%d ",mvid);
}
List_Delete(mrverts);
gdim = MR_GEntDim(mr);
gid = MR_GEntID(mr);
fprintf(fp,"\t%d %d\n",gdim,gid);
}
}
if (reptype == R2 || reptype == R4) {
fprintf(fp,"adjregions\n");
idx = 0;
while ((mr = MESH_Next_Region(mesh,&idx))) {
nar = MR_Num_Faces(mr);
fprintf(fp,"%d ",nar);
adjregs = MR_AdjRegions(mr);
for (j = 0; j < nar; j++) {
mr2 = List_Entry(adjregs,j);
if ((long) mr2 == -1)
fprintf(fp,"%d ",0);
else {
MEnt_Get_AttVal(mr2,ridatt,&mrid2,&rval,&pval);
fprintf(fp,"%d ",mrid2);
}
}
fprintf(fp,"\n");
List_Delete(adjregs);
}
}
}
/* Write out attributes if there are more than the 4 that we created
in this routine */
if ((natt = MESH_Num_Attribs(mesh)) > 4) {
fprintf(fp,"attributes\n");
for (i = 0; i < natt; i++) {
attrib = MESH_Attrib(mesh,i);
/* Don't write out attribs we created for the internal use of
this routine */
if (attrib == vidatt || attrib == eidatt || attrib == fidatt ||
attrib == ridatt) continue;
MAttrib_Get_Name(attrib,attname);
atttype = MAttrib_Get_Type(attrib);
if (atttype == POINTER) continue; /* cannot write it out */
ncomp = MAttrib_Get_NumComps(attrib);
attentdim = MAttrib_Get_EntDim(attrib);
/* First count how many entities actually have the attribute assigned */
nent = 0;
switch(attentdim) {
case MVERTEX:
idx = 0;
while ((mv = MESH_Next_Vertex(mesh,&idx)))
if (MEnt_Get_AttVal(mv,attrib,&ival,&rval,&pval)) nent++;
break;
case MEDGE:
idx = 0;
while ((me = MESH_Next_Edge(mesh,&idx)))
if (MEnt_Get_AttVal(me,attrib,&ival,&rval,&pval)) nent++;
break;
case MFACE:
idx = 0;
while ((mf = MESH_Next_Face(mesh,&idx)))
if (MEnt_Get_AttVal(mf,attrib,&ival,&rval,&pval)) nent++;
break;
case MREGION:
idx = 0;
while ((mr = MESH_Next_Region(mesh,&idx)))
if (MEnt_Get_AttVal(mr,attrib,&ival,&rval,&pval)) nent++;
break;
case MALLTYPE:
idx = 0;
while ((mv = MESH_Next_Vertex(mesh,&idx)))
if (MEnt_Get_AttVal(mv,attrib,&ival,&rval,&pval)) nent++;
idx = 0;
while ((me = MESH_Next_Edge(mesh,&idx)))
if (MEnt_Get_AttVal(me,attrib,&ival,&rval,&pval)) nent++;
idx = 0;
while ((mf = MESH_Next_Face(mesh,&idx)))
if (MEnt_Get_AttVal(mf,attrib,&ival,&rval,&pval)) nent++;
idx = 0;
while ((mr = MESH_Next_Region(mesh,&idx)))
if (MEnt_Get_AttVal(mr,attrib,&ival,&rval,&pval)) nent++;
break;
default:
break;
} /* switch (attentdim) */
/* No point in writing out attribute if no entity uses it! Or is there? */
if (!nent) continue;
fprintf(fp,"%-s\n",attname);
switch(atttype) {
case INT:
fprintf(fp,"INT\n");
break;
case DOUBLE:
fprintf(fp,"DOUBLE\n");
break;
case VECTOR:
fprintf(fp,"VECTOR\n");
break;
case TENSOR:
fprintf(fp,"TENSOR\n");
break;
default:
MSTK_Report("MESH_WriteToFile",
"Unrecognizable or unprintable attribute type\n",MSTK_WARN);
continue;
}
fprintf(fp,"%-d\n",ncomp);
switch(attentdim) {
case MVERTEX:
fprintf(fp,"MVERTEX\n");
break;
case MEDGE:
fprintf(fp,"MEDGE\n");
break;
case MFACE:
fprintf(fp,"MFACE\n");
break;
case MREGION:
fprintf(fp,"MREGION\n");
break;
case MALLTYPE:
fprintf(fp,"MALLTYPE\n");
break;
default:
MSTK_Report("Mesh_WriteToFile","Unrecognized entity type",MSTK_WARN);
break;
}
fprintf(fp,"%-d\n",nent);
switch(attentdim) {
case MVERTEX:
idx = 0;
while ((mv = MESH_Next_Vertex(mesh,&idx))) {
if (MEnt_Get_AttVal(mv,attrib,&ival,&rval,&pval)) {
MEnt_Get_AttVal(mv,vidatt,&mvid,&rdummy,&pdummy);
fprintf(fp,"0 %-d ",mvid);
switch (atttype) {
case INT:
fprintf(fp," %-d",ival);
break;
case DOUBLE:
fprintf(fp," %-lf ",rval);
break;
case VECTOR: case TENSOR:
rval_arr = (double *) pval;
for (k = 0; k < ncomp; k++)
fprintf(fp," %-lf ",rval_arr[k]);
break;
default:
break;
}
fprintf(fp,"\n");
}
}
break;
case MEDGE:
idx = 0;
while ((me = MESH_Next_Edge(mesh,&idx))) {
if (MEnt_Get_AttVal(me,attrib,&ival,&rval,&pval)) {
MEnt_Get_AttVal(me,eidatt,&meid,&rdummy,&pdummy);
fprintf(fp,"1 %-d ",meid);
switch (atttype) {
case INT:
fprintf(fp," %-d",ival);
break;
case DOUBLE:
fprintf(fp," %-lf ",rval);
break;
case VECTOR: case TENSOR:
rval_arr = (double *) pval;
for (k = 0; k < ncomp; k++)
fprintf(fp," %-lf ",rval_arr[k]);
break;
default:
break;
}
fprintf(fp,"\n");
}
}
break;
case MFACE:
idx = 0;
while ((mf = MESH_Next_Face(mesh,&idx))) {
if (MEnt_Get_AttVal(mf,attrib,&ival,&rval,&pval)) {
MEnt_Get_AttVal(mf,fidatt,&mfid,&rdummy,&pdummy);
fprintf(fp,"2 %-d ",mfid);
switch (atttype) {
case INT:
fprintf(fp," %-d",ival);
break;
case DOUBLE:
fprintf(fp," %-lf ",rval);
break;
case VECTOR: case TENSOR:
rval_arr = (double *) pval;
for (k = 0; k < ncomp; k++)
fprintf(fp," %-lf ",rval_arr[k]);
break;
default:
break;
}
fprintf(fp,"\n");
}
}
break;
case MREGION:
idx = 0;
while ((mr = MESH_Next_Region(mesh,&idx))) {
if (MEnt_Get_AttVal(mr,attrib,&ival,&rval,&pval)) {
MEnt_Get_AttVal(mr,ridatt,&mrid,&rdummy,&pdummy);
fprintf(fp,"3 %-d ",mrid);
switch (atttype) {
case INT:
fprintf(fp," %-d",ival);
break;
case DOUBLE:
fprintf(fp," %-lf ",rval);
break;
case VECTOR: case TENSOR:
rval_arr = (double *) pval;
for (k = 0; k < ncomp; k++)
fprintf(fp," %-lf ",rval_arr[k]);
break;
default:
break;
}
fprintf(fp,"\n");
}
}
break;
case MALLTYPE:
idx = 0;
while ((mv = MESH_Next_Vertex(mesh,&idx))) {
if (MEnt_Get_AttVal(mv,attrib,&ival,&rval,&pval)) {
MEnt_Get_AttVal(mv,vidatt,&mvid,&rdummy,&pdummy);
fprintf(fp,"0 %-d ",mvid);
switch (atttype) {
case INT:
fprintf(fp," %-d",ival);
break;
case DOUBLE:
fprintf(fp," %-lf ",rval);
break;
case VECTOR: case TENSOR:
rval_arr = (double *) pval;
for (k = 0; k < ncomp; k++)
fprintf(fp," %-lf ",rval_arr[k]);
break;
default:
break;
}
fprintf(fp,"\n");
}
}
idx = 0;
while ((me = MESH_Next_Edge(mesh,&idx))) {
if (MEnt_Get_AttVal(me,attrib,&ival,&rval,&pval)) {
MEnt_Get_AttVal(me,eidatt,&meid,&rdummy,&pdummy);
fprintf(fp,"1 %-d ",meid);
switch (atttype) {
case INT:
fprintf(fp," %-d",ival);
break;
case DOUBLE:
fprintf(fp," %-lf ",rval);
break;
case VECTOR: case TENSOR:
rval_arr = (double *) pval;
for (k = 0; k < ncomp; k++)
fprintf(fp," %-lf ",rval_arr[k]);
break;
default:
break;
}
fprintf(fp,"\n");
}
}
idx = 0;
while ((mf = MESH_Next_Face(mesh,&idx))) {
if (MEnt_Get_AttVal(mf,attrib,&ival,&rval,&pval)) {
MEnt_Get_AttVal(mf,fidatt,&mfid,&rdummy,&pdummy);
fprintf(fp,"2 %-d ",mfid);
switch (atttype) {
case INT:
fprintf(fp," %-d",ival);
break;
case DOUBLE:
fprintf(fp," %-lf ",rval);
break;
case VECTOR: case TENSOR:
rval_arr = (double *) pval;
for (k = 0; k < ncomp; k++)
fprintf(fp," %-lf ",rval_arr[k]);
break;
default:
break;
}
fprintf(fp,"\n");
}
}
idx = 0;
while ((mr = MESH_Next_Region(mesh,&idx))) {
if (MEnt_Get_AttVal(mr,attrib,&ival,&rval,&pval)) {
MEnt_Get_AttVal(mr,ridatt,&mrid,&rdummy,&pdummy);
fprintf(fp,"3 %-d ",mrid);
switch (atttype) {
case INT:
fprintf(fp," %-d",ival);
break;
case DOUBLE:
fprintf(fp," %-lf ",rval);
break;
case VECTOR: case TENSOR:
rval_arr = (double *) pval;
for (k = 0; k < ncomp; k++)
fprintf(fp," %-lf ",rval_arr[k]);
break;
default:
break;
}
fprintf(fp,"\n");
}
}
break;
default:
break;
} /* switch (attentdim) */
} /* for (i = 0; i < natt) */
} /* if (Mesh_Num_Attribs(mesh)) */
idx = 0; i = 0;
while ((mv = MESH_Next_Vertex(mesh,&idx)))
MEnt_Rem_AttVal(mv,vidatt);
idx = 0; i = 0;
while ((me = MESH_Next_Edge(mesh,&idx)))
MEnt_Rem_AttVal(me,eidatt);
idx = 0; i = 0;
while ((mf = MESH_Next_Face(mesh,&idx)))
MEnt_Rem_AttVal(mf,fidatt);
idx = 0; i = 0;
while ((mr = MESH_Next_Region(mesh,&idx)))
MEnt_Rem_AttVal(mr,ridatt);
MAttrib_Delete(vidatt);
MAttrib_Delete(eidatt);
MAttrib_Delete(fidatt);
MAttrib_Delete(ridatt);
fclose(fp);
return 1;
}
MRegion_ptr MRs_Join(MRegion_ptr r1, MRegion_ptr r2, MFace_ptr f) {
int i, j, nrf1, nrf2, gdim, gid, *rfdir2;
MFace_ptr *rf2, fcmn=f;
Mesh_ptr mesh;
List_ptr rfaces2;
mesh = MF_Mesh(r1);
gid = MF_GEntID(r1);
if (mesh != MF_Mesh(r2)) {
MSTK_Report("MRs_Join","Regions not from same mesh",MSTK_ERROR);
return 0;
}
else if (gid != MR_GEntID(r2)) {
MSTK_Report("MRs_Join","Regions not from same geometric entity",MSTK_ERROR);
return 0;
}
rfaces2 = MR_Faces(r2);
nrf2 = List_Num_Entries(rfaces2);
if (fcmn) {
if (!MR_UsesEntity(r1,fcmn,MFACE)) {
MSTK_Report("MRs_Join","Cannot find common face in region",MSTK_ERROR);
return 0;
}
}
else { /* find the common face */
List_ptr rfaces1 = MR_Faces(r1);
int idx = 0;
MFace_ptr rf;
while ((rf = List_Next_Entry(rfaces2,&idx))) {
if (List_Contains(rfaces1,rf)) {
fcmn = rf;
break;
}
}
List_Delete(rfaces1);
}
rf2 = (MFace_ptr) malloc(nrf2*sizeof(MFace_ptr));
rfdir2 = (int *) malloc(nrf2*sizeof(int));
int found;
for (i = 0, j = 0, found = 0; i < nrf2; i++) {
MFace_ptr rface = List_Entry(rfaces2,i);
if (rface == fcmn)
found = 1;
else {
rf2[j] = rface;
rfdir2[j] = MR_FaceDir_i(r2,i);
j++;
}
}
List_Delete(rfaces2);
if (!found) {
MSTK_Report("MRs_Join","Cannot find common face in region",MSTK_ERROR);
return 0;
}
MR_Delete(r2,0);
MR_Replace_Faces(r1,1,&fcmn,nrf2-1,rf2,rfdir2);
MF_Delete(fcmn,0);
free(rf2); free(rfdir2);
return r1;
}
List_ptr MR_Vertices_FNR3R4(MRegion_ptr r) {
int i, j, n, ne, nf, mkr, found, idx;
int diradj0=0, diropp=0, fdir, fdir0, fdir1, allquad, alltri;
int nquads, ntris, itri0, itri1, iquad0;
MFace_ptr face=NULL, face0=NULL, fadj0=NULL, fopp=NULL;
MFace_ptr quad0=NULL, tri0=NULL, tri1=NULL;
MEdge_ptr edge, fedge00, upedge;
MVertex_ptr vert, rv0, rvopp0=NULL;
List_ptr rvertices, fverts, fedges0, adjfedges;
MRegion_Adj_FN *adj;
adj = (MRegion_Adj_FN *) r->adj;
nf = List_Num_Entries(adj->rfaces);
switch (r->mrtype) {
case TET:
/* Add vertices of first face to list of region vertices */
face0 = List_Entry(adj->rfaces,0); /* first face */
fdir0 = MR_FaceDir_i(r,0); /* Sense in which face is used in region */
rvertices = MF_Vertices(face0,!fdir0,0);
face = List_Entry(adj->rfaces,1);
fverts = MF_Vertices(face,1,0);
for (i = 0; i < 3; i++) {
vert = List_Entry(fverts,i);
if (!List_Contains(rvertices,vert)) {
List_Add(rvertices,vert);
break;
}
}
List_Delete(fverts);
return rvertices;
break;
case PRISM:
tri0 = NULL; itri0 = -1;
tri1 = NULL; itri1 = -1;
for (i = 0; i < nf; i++) {
face = List_Entry(adj->rfaces,i);
ne = MF_Num_Edges(face);
if (ne == 3) {
if (!tri0) {
tri0 = face;
itri0 = i;
}
else {
tri1 = face;
itri1 = i;
}
}
}
fdir0 = MR_FaceDir_i(r,itri0); /* Sense in which face is used in region */
rvertices = MF_Vertices(tri0,!fdir0,0);
/* find the vertical edge between vertex 0 of bottom triangle and
top triangle */
fdir1 = MR_FaceDir_i(r,itri1);
fverts = MF_Vertices(tri1,fdir1,0);
rv0 = List_Entry(rvertices,0); /* first vtx of region & bottom face */
for (i = 0; i < 3; i++) {
vert = List_Entry(fverts,i);
if (MVs_CommonEdge(rv0,vert)) {
List_Add(rvertices,vert);
List_Add(rvertices,List_Entry(fverts,(i+1)%3));
List_Add(rvertices,List_Entry(fverts,(i+2)%3));
break;
}
}
List_Delete(fverts);
return rvertices;
break;
case PYRAMID:
quad0 = NULL; iquad0 = -1;
tri0 = NULL; itri0 = -1;
for (i = 0; i < nf; i++) {
face = List_Entry(adj->rfaces,i);
ne = MF_Num_Edges(face);
if (ne == 4) {
if (!quad0) {
quad0 = face;
iquad0 = i;
}
}
else if (ne == 3) {
if (!tri0) {
tri0 = face;
itri0 = i;
}
}
}
fdir0 = MR_FaceDir_i(r,iquad0); /* Sense in which face is used in region */
rvertices = MF_Vertices(quad0,!fdir0,0);
fverts = MF_Vertices(tri0,1,0);
for (i = 0; i < 3; i++) {
vert = List_Entry(fverts,i);
if (!List_Contains(rvertices,vert)) { /* found apex vtx of pyramid */
List_Add(rvertices,vert);
break;
}
}
List_Delete(fverts);
return rvertices;
break;
case HEX:
face0 = List_Entry(adj->rfaces,0); /* face 0 */
fdir0 = MR_FaceDir_i(r,0); /* dir of face w.r.t. region */
/* Add vertices of first face */
rvertices = MF_Vertices(face0,!fdir0,0);
/* vertex 0 of region and of face 0 */
rv0 = List_Entry(rvertices,0);
/* Edges of face 0 */
fedges0 = MF_Edges(face0,!fdir0,rv0);
/* edge 0 of face 0 (wrt face dir pointing into the region) */
fedge00 = List_Entry(fedges0,0);
/* Get the face adjacent to edge 0 of face 0 and also the
opposite face, a face that has no edge common face 0 */
fopp = NULL; fadj0 = NULL;
found = 0;
for (i = 1; i < nf; i++) {
face = List_Entry(adj->rfaces,i);
/* Check if face uses any edge of face 0 */
for (j = 0, found = 0; j < 4; j++) {
edge = List_Entry(fedges0,j);
if (MF_UsesEntity(face,edge,1)) {
if (edge == fedge00) {
/* face uses edge 0 of face 0 (w.r.t. face dir pointing
into region) */
fadj0 = face;
diradj0 = MR_FaceDir_i(r,i);
}
found = 1;
break;
}
}
if (!found) {
fopp = face;
diropp = MR_FaceDir_i(r,i);
}
if (fopp && fadj0)
break;
}
if (!fopp) {
MSTK_Report("MR_Vertices_FNR3R4","Could not find opposite face",MSTK_ERROR);
List_Delete(fedges0);
List_Delete(rvertices);
return (void *) NULL;
}
/* edges of face adjacent to edge 0 of face 0 */
adjfedges = MF_Edges(fadj0,1,rv0);
/* edge connecting rv0 and vertex on opposite face */
upedge = diradj0 ? List_Entry(adjfedges,3): List_Entry(adjfedges,0);
#ifdef DEBUG
if (!ME_UsesEntity(upedge,rv0,0))
MSTK_Report("MR_Vertices_FNR3R4","Cannot find correct vertical edge",
MSTK_ERROR);
#endif
if (ME_Vertex(upedge,0) == rv0)
rvopp0 = ME_Vertex(upedge,1);
else {
rvopp0 = ME_Vertex(upedge,0);
}
List_Delete(fedges0);
List_Delete(adjfedges);
fverts = MF_Vertices(fopp,diropp,rvopp0);
for (i = 0; i < 4; i++)
List_Add(rvertices,List_Entry(fverts,i));
List_Delete(fverts);
return rvertices;
break;
default:
/* General Polyhedra */
mkr = MSTK_GetMarker();
/* Add vertices of first face */
face = List_Entry(adj->rfaces,0); /* first face */
fdir = MR_FaceDir_i(r,0); /* Sense in which face is used in region */
rvertices = MF_Vertices(face,!fdir,0);
List_Mark(rvertices,mkr);
for (i = 1; i < nf-1; i++) {
face = List_Entry(adj->rfaces,i);
fverts = MF_Vertices(face,1,0);
n = List_Num_Entries(fverts);
for (j = 0; j < n; j++) {
vert = List_Entry(fverts,j);
if (!MEnt_IsMarked(vert,mkr)) {
List_Add(rvertices,vert);
MEnt_Mark(vert,mkr);
}
}
List_Delete(fverts);
}
List_Unmark(rvertices,mkr);
MSTK_FreeMarker(mkr);
return rvertices;
}
return NULL;
}
MVertex_ptr MF_Split_SimplexMesh(MFace_ptr fsplit, double *splitxyz) {
int i, j, k, rfdir=1, ntets=0, ntris=0, *rid=NULL, fgdim, fgid, found;
MVertex_ptr vsplit, ev[2], (*tetverts)[4]=NULL, triverts[3], fv;
MVertex_ptr fvarr[3], rvarr[4];
MFace_ptr f;
MRegion_ptr r;
List_ptr fedges, ftets, rfaces, fverts;
Mesh_ptr mesh = MF_Mesh(fsplit);
/* point is not on the boundary of the face */
ftets = MF_Regions(fsplit);
if (ftets) {
ntets = List_Num_Entries(ftets);
tetverts = (MVertex_ptr (*)[4]) malloc(ntets*sizeof(MVertex_ptr [4]));
rid = (int *) malloc(ntets*sizeof(int));
}
for (i = 0; i < ntets; i++) {
r = List_Entry(ftets,i);
rfaces = MR_Faces(r);
/* Find the face to be split and get the first three vertices
in a suitable order from it. Also, find another face and
get a vertex that is not in the face to be split. This vertex
forms the fourth vertex of the tet */
for (j = 0; j < 4; j++) {
f = List_Entry(rfaces,j);
if (f == fsplit) {
rfdir = MR_FaceDir_i(r,j);
fverts = MF_Vertices(f,!rfdir,0);
for (k = 0; k < 3; k++) {
tetverts[i][0] = List_Entry(fverts,0);
tetverts[i][1] = List_Entry(fverts,1);
tetverts[i][2] = List_Entry(fverts,2);
}
List_Delete(fverts);
break;
}
}
found = 0;
for (j = 0; j < 4; j++) {
f = List_Entry(rfaces,j);
if (f != fsplit) {
fverts = MF_Vertices(f,!rfdir,0);
for (k = 0; k < 3; k++) {
fv = List_Entry(fverts,k);
if (!MF_UsesEntity(fsplit,fv,MVERTEX)) {
tetverts[i][3] = fv;
found = 1;
break;
}
}
List_Delete(fverts);
}
if (found) break;
}
List_Delete(rfaces);
}
/* Now that we finished collecting info about the connected tets we
can delete them */
if (ftets) {
for (i = 0; i < ntets; i++)
MR_Delete(List_Entry(ftets,i),0);
List_Delete(ftets);
}
/* Delete the face itself */
fverts = MF_Vertices(fsplit,1,0);
for (i = 0; i < 3; i++)
triverts[i] = List_Entry(fverts,i);
List_Delete(fverts);
fgdim = MF_GEntDim(fsplit);
fgid = MF_GEntID(fsplit);
/* Split the face */
vsplit = MF_Split(fsplit, splitxyz);
/* Create three tets for each tet that was deleted */
for (i = 0; i < ntets; i++) {
for (j = 0; j < 3; j++) {
r = MR_New(mesh);
rvarr[0] = vsplit;
rvarr[1] = tetverts[i][j];
rvarr[2] = tetverts[i][(j+1)%3];
rvarr[3] = tetverts[i][3];
MR_Set_Vertices(r, 4, rvarr, 0, NULL);
MR_Set_GEntID(r,rid[i]);
}
}
if (ntets) {
free(tetverts);
free(rid);
}
return vsplit;
}
int MESH_Send_NonVertexEntities_FN(Mesh_ptr mesh, int torank, MSTK_Comm comm,
int *numreq, int *maxreq, MPI_Request **requests,
int *numptrs2free, int *maxptrs2free,
void ***ptrs2free) {
int i, j, nv, ne, nf, nr;
int nevs, nfes, nrfs, nfe, nrv, nrf, dir;
int maxnfe, maxnrf;
int *mesh_info;
int *list_edge=NULL, *list_face=NULL, *list_region=NULL;
MVertex_ptr mv;
MEdge_ptr me;
MFace_ptr mf;
MRegion_ptr mr;
List_ptr mfedges, mrfaces, mrverts;
RepType rtype;
double coor[3];
MPI_Request mpirequest;
if (requests == NULL)
MSTK_Report("MESH_Surf_SendMesh","MPI requests array is NULL",MSTK_FATAL);
if (*maxreq == 0) {
*maxreq = 25;
*requests = (MPI_Request *) malloc(*maxreq*sizeof(MPI_Request));
*numreq = 0;
}
else if (*maxreq < (*numreq) + 13) {
*maxreq = 2*(*maxreq) + 11;
*requests = (MPI_Request *) realloc(*requests,*maxreq*sizeof(MPI_Request));
}
ne = MESH_Num_Edges(mesh);
nf = MESH_Num_Faces(mesh);
nr = MESH_Num_Regions(mesh);
/* some other known quantitites - 5 items per edge (2 for verts
and 3 for extra data), maxnfe+4 items per face (1 for number of
edges, maxnfe for edge indices, anad 3 for extra data),
maxnrf+4 items per region (1 for number of faces, maxnrf for
face indices and 3 for extra data */
maxnfe = 0;
for (i = 0; i < nf; i++) {
mf = MESH_Face(mesh,i);
nfe = MF_Num_Edges(mf);
if (nfe > maxnfe)
maxnfe = nfe;
}
maxnrf = 0;
for (i = 0; i < nr; i++) {
mr = MESH_Region(mesh,i);
nrf = MR_Num_Faces(mr);
if (nrf > maxnrf)
maxnrf = nrf;
}
// The amount of extra info we are sending and their meaning is obviously
// known on the receiving side too. So nevs, nfes and nrfs can be
// calculated without us sending it
nevs = (2+3)*ne;
nfes = (1 + maxnfe + 3)*nf;
nrfs = (1 + maxnrf + 3)*nr;
/* Reserve nevs spots for each edge */
list_edge = (int *) malloc(5*ne*sizeof(int));
nevs = 0;
/* Store the vertex ids, then the 3 auxilliary data fields */
for(i = 0; i < ne; i++) {
me = MESH_Edge(mesh,i);
list_edge[nevs] = MV_ID(ME_Vertex(me,0));
list_edge[nevs+1] = MV_ID(ME_Vertex(me,1));
list_edge[nevs+2] = (ME_GEntID(me)<<3) | (ME_GEntDim(me));
list_edge[nevs+3] = (ME_MasterParID(me) <<3) | (ME_OnParBoundary(me)<<2) | (ME_PType(me));
list_edge[nevs+4] = ME_GlobalID(me);
nevs += 5;
}
/* send detailed edge info */
MPI_Isend(list_edge,nevs,MPI_INT,torank,torank,comm,&mpirequest);
(*requests)[*numreq] = mpirequest;
(*numreq)++;
/* Reserve nfes spots for each face */
list_face = (int *) malloc(nfes*sizeof(int));
nfes = 0;
/* first store nfe, then the edge ids, then the 3 auxilliary data fields */
for(i = 0; i < nf; i++) {
mf = MESH_Face(mesh,i);
mfedges = MF_Edges(mf,1,0);
nfe = List_Num_Entries(mfedges);
list_face[nfes] = nfe;
for(j = 0; j < nfe; j++) {
dir = MF_EdgeDir_i(mf,j) ? 1 : -1;
list_face[nfes+j+1] = dir*ME_ID(List_Entry(mfedges,j));
}
list_face[nfes+nfe+1] = (MF_GEntID(mf)<<3) | (MF_GEntDim(mf));
list_face[nfes+nfe+2] = (MF_MasterParID(mf)<<3) | (MF_OnParBoundary(mf)<<2) | (MF_PType(mf));
list_face[nfes+nfe+3] = MF_GlobalID(mf);
nfes += (nfe + 4);
List_Delete(mfedges);
}
/* send detailed face info */
MPI_Isend(list_face,nfes,MPI_INT,torank,torank,comm,&mpirequest);
(*requests)[*numreq] = mpirequest;
(*numreq)++;
if (nr) {
list_region = (int *) malloc(nrfs*sizeof(int));
nrfs = 0;
/* first store nrf, then the face ids, then the 3 auxilliary data fields */
for(i = 0; i < nr; i++) {
mr = MESH_Region(mesh,i);
mrfaces = MR_Faces(mr);
nrf = List_Num_Entries(mrfaces);
list_region[nrfs] = nrf;
for(j = 0; j < nrf; j++) {
dir = MR_FaceDir_i(mr,j) == 1 ? 1 : -1;
list_region[nrfs+j+1] = dir*MF_ID(List_Entry(mrfaces,j));
}
list_region[nrfs+nrf+1] = (MR_GEntID(mr)<<3) | (MR_GEntDim(mr));
list_region[nrfs+nrf+2] = (MR_MasterParID(mr)<<3) | (MR_PType(mr)); /* MR_PType is 2 bits; 3 bit is 0 */
list_region[nrfs+nrf+3] = MR_GlobalID(mr);
nrfs += (nrf + 4);
List_Delete(mrfaces);
}
/* send detailed region info */
MPI_Isend(list_region,nrfs,MPI_INT,torank,torank,comm,&mpirequest);
(*requests)[*numreq] = mpirequest;
(*numreq)++;
}
/* collect allocated memory so it can be freed in a higher level
routine after MPI_Waitall or MPI_Test has ensured that the send
has been completed */
if (ptrs2free == NULL)
MSTK_Report("MESH_Surf_SendMesh_FN","ptrs2free array is NULL",MSTK_FATAL);
int nptrs = 3;
if (*maxptrs2free == 0) {
*maxptrs2free = 25;
*ptrs2free = (void **) malloc(*maxptrs2free*sizeof(void *));
*numptrs2free = 0;
}
else if (*maxptrs2free < (*numptrs2free) + nptrs) {
*maxptrs2free = 2*(*maxptrs2free) + nptrs;
*ptrs2free = (void **) realloc(*ptrs2free,(*maxptrs2free)*sizeof(void *));
}
if (ne)
(*ptrs2free)[(*numptrs2free)++] = list_edge;
if (nf)
(*ptrs2free)[(*numptrs2free)++] = list_face;
if (nr)
(*ptrs2free)[(*numptrs2free)++] = list_region;
return 1;
}
