C++ (Cpp) Reaction_setName示例

示例#1

文件： TestReaction.c 项目： copasi/copasi-dependencies

END_TEST


START_TEST (test_Reaction_setName)
{
  const char *name = "MapK_Cascade";


  Reaction_setName(R, name);

  fail_unless( !strcmp(Reaction_getName(R), name) );
  fail_unless( Reaction_isSetName(R) );

  if (Reaction_getName(R) == name)
  {
    fail("Reaction_setName(...) did not make a copy of string.");
  }

  /* Reflexive case (pathological) */
  Reaction_setName(R, Reaction_getName(R));
  fail_unless( !strcmp(Reaction_getName(R), name) );

  Reaction_setName(R, NULL);
  fail_unless( !Reaction_isSetName(R) );

  if (Reaction_getName(R) != NULL)
  {
    fail("Reaction_setName(R, NULL) did not clear string.");
  }
}

示例#2

文件： TestReaction_newSetters.c 项目： mgaldzic/copasi_api

END_TEST


START_TEST (test_Reaction_setName1)
{
  int i = Reaction_setName(R, "cell");

  fail_unless( i == LIBSBML_OPERATION_SUCCESS );
  fail_unless( Reaction_isSetName(R) );

  i = Reaction_unsetName(R);

  fail_unless( i == LIBSBML_OPERATION_SUCCESS );
  fail_unless( !Reaction_isSetName(R) );
}

示例#3

文件： TestReaction_newSetters.c 项目： mgaldzic/copasi_api

END_TEST


START_TEST (test_Reaction_setName3)
{
  Reaction_t *p = 
    Reaction_create(2, 2);

  int i = Reaction_setName(p, NULL);

  fail_unless( i == LIBSBML_OPERATION_SUCCESS );
  fail_unless( !Reaction_isSetName(p) );

  Reaction_free(p);
}

示例#4

文件： TestReadFromFile2.c 项目： copasi/copasi-dependencies

END_TEST


START_TEST (test_create_l1v1_units)
{
  Model_t            *m;
  Compartment_t      *c;
  KineticLaw_t       *kl;
  Parameter_t        *p;
  Reaction_t         *r;
  Species_t          *s;
  SpeciesReference_t *sr;
  Unit_t             *u;
  UnitDefinition_t   *ud;


  /**
   * <sbml level="1" version="1">
   */
  m = Model_create(2, 4);

  /**
   * <unitDefinition name="substance">
   *   <listOfUnits>
   *     <unit kind="mole" scale="-3"/>
   *   </listOfUnits>
   * </unitDefinition>
   */
  ud = Model_createUnitDefinition(m);
  UnitDefinition_setName(ud, "substance");

  u = Model_createUnit(m);
  Unit_setKind(u,UNIT_KIND_MOLE);
  Unit_setScale(u, -3);

  /**
   * <unitDefinition name="mls">
   *   <listOfUnits>
   *     <unit kind="mole"   scale="-3"/>
   *     <unit kind="liter"  exponent="-1"/>
   *     <unit kind="second" exponent="-1"/>
   *   </listOfUnits>
   * </unitDefinition>
   */
  ud = Model_createUnitDefinition(m);
  UnitDefinition_setName(ud, "mls");

  u = Model_createUnit(m);
  Unit_setKind(u, UNIT_KIND_MOLE);
  Unit_setScale(u, -3);

  u = Model_createUnit(m);
  Unit_setKind(u, UNIT_KIND_LITER);
  Unit_setExponent(u, -1);

  u = Model_createUnit(m);
  Unit_setKind(u, UNIT_KIND_SECOND);
  Unit_setExponent(u, -1);

  /**
   * <listOfCompartments>
   *   <compartment name="cell"/>
   * </listOfCompartments>
   */
  c = Model_createCompartment(m);
  Compartment_setName(c, "cell");

  /**
   * <listOfSpecies>
   *   <specie name="x0" compartment="cell" initialAmount="1"/>
   *   <specie name="x1" compartment="cell" initialAmount="1"/>
   *   <specie name="s1" compartment="cell" initialAmount="1"/>
   *   <specie name="s2" compartment="cell" initialAmount="1"/>
   * </listOfSpecies>
   */
  s = Model_createSpecies(m);
  Species_setName(s, "x0");
  Species_setCompartment(s, "cell");
  Species_setInitialAmount(s, 1);

  s = Model_createSpecies(m);
  Species_setName(s, "x1");
  Species_setCompartment(s, "cell");
  Species_setInitialAmount(s, 1);

  s = Model_createSpecies(m);
  Species_setName(s, "s1");
  Species_setCompartment(s, "cell");
  Species_setInitialAmount(s, 1);

  s = Model_createSpecies(m);
  Species_setName(s, "s2");
  Species_setCompartment(s, "cell"); 
  Species_setInitialAmount(s, 1);

  /**
   * <listOfParameters>
   *   <parameter name="vm" value="2" units="mls"/>
   *   <parameter name="km" value="2"/>
   * </listOfParameters>
   */
  p = Model_createParameter(m);
  Parameter_setName (p, "vm");
  Parameter_setUnits(p, "mls");
  Parameter_setValue(p, 2);

  p = Model_createParameter(m);
  Parameter_setName (p, "km");
  Parameter_setValue(p, 2);

  /**
   * <reaction name="v1">
   *   <listOfReactants>
   *     <specieReference specie="x0"/>
   *   </listOfReactants>
   *   <listOfProducts>
   *     <specieReference specie="s1"/>
   *   </listOfProducts>
   *   <kineticLaw formula="(vm * s1)/(km + s1)"/>
   * </reaction>
   */
  r = Model_createReaction(m);
  Reaction_setName(r, "v1");

  sr = Model_createReactant(m);
  SpeciesReference_setSpecies(sr, "x0");

  sr = Model_createProduct(m);
  SpeciesReference_setSpecies(sr, "s1");

  kl = Model_createKineticLaw(m);
  KineticLaw_setFormula(kl, "(vm * s1)/(km + s1)");

  /**
   * <reaction name="v2">
   *   <listOfReactants>
   *     <specieReference specie="s1"/>
   *   </listOfReactants>
   *   <listOfProducts>
   *     <specieReference specie="s2"/>
   *   </listOfProducts>
   *   <kineticLaw formula="(vm * s2)/(km + s2)"/>
   * </reaction>
   */
  r = Model_createReaction(m);
  Reaction_setName(r, "v2");

  sr = Model_createReactant(m);
  SpeciesReference_setSpecies(sr, "s1");

  sr = Model_createProduct(m);
  SpeciesReference_setSpecies(sr, "s2");

  kl = Model_createKineticLaw(m);
  KineticLaw_setFormula(kl, "(vm * s2)/(km + s2)");

  /**
   * <reaction name="v3">
   *   <listOfReactants>
   *     <specieReference specie="s2"/>
   *   </listOfReactants>
   *   <listOfProducts>
   *     <specieReference specie="x1"/>
   *   </listOfProducts>
   *   <kineticLaw formula="(vm * s1)/(km + s1)"/>
   * </reaction>
   */
  r = Model_createReaction(m);
  Reaction_setName(r, "v3");

  sr = Model_createReactant(m);
  SpeciesReference_setSpecies(sr, "s2");

  sr = Model_createProduct(m);
  SpeciesReference_setSpecies(sr, "x1");

  kl = Model_createKineticLaw(m);
  KineticLaw_setFormula(kl, "(vm * s1)/(km + s1)");

  Model_free(m);
}