PetscErrorCode IJacobian(TS ts,PetscReal t,Vec X,Vec Xdot,PetscReal a,Mat A,Mat B,Userctx *user) { PetscErrorCode ierr; SNES snes; PetscScalar atmp = (PetscScalar) a; PetscInt i,row; PetscFunctionBegin; user->t = t; ierr = TSGetSNES(ts,&snes);CHKERRQ(ierr); ierr = ResidualJacobian(snes,X,A,B,user);CHKERRQ(ierr); for (i=0;i < ngen;i++) { row = 9*i; ierr = MatSetValues(A,1,&row,1,&row,&atmp,ADD_VALUES);CHKERRQ(ierr); row = 9*i+1; ierr = MatSetValues(A,1,&row,1,&row,&atmp,ADD_VALUES);CHKERRQ(ierr); row = 9*i+2; ierr = MatSetValues(A,1,&row,1,&row,&atmp,ADD_VALUES);CHKERRQ(ierr); row = 9*i+3; ierr = MatSetValues(A,1,&row,1,&row,&atmp,ADD_VALUES);CHKERRQ(ierr); row = 9*i+6; ierr = MatSetValues(A,1,&row,1,&row,&atmp,ADD_VALUES);CHKERRQ(ierr); row = 9*i+7; ierr = MatSetValues(A,1,&row,1,&row,&atmp,ADD_VALUES);CHKERRQ(ierr); row = 9*i+8; ierr = MatSetValues(A,1,&row,1,&row,&atmp,ADD_VALUES);CHKERRQ(ierr); } ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); PetscFunctionReturn(0); }
PetscErrorCode AlgJacobian(SNES snes,Vec X,Mat A,Mat B,void *ctx) { PetscErrorCode ierr; Userctx *user=(Userctx*)ctx; PetscFunctionBegin; ierr = ResidualJacobian(snes,X,A,B,ctx);CHKERRQ(ierr); ierr = MatSetOption(A,MAT_KEEP_NONZERO_PATTERN,PETSC_TRUE);CHKERRQ(ierr); ierr = MatZeroRowsIS(A,user->is_diff,1.0,NULL,NULL);CHKERRQ(ierr); PetscFunctionReturn(0); }
void DruckerPragerModel<EvalT, Traits>:: computeState(typename Traits::EvalData workset, std::map<std::string, Teuchos::RCP<PHX::MDField<ScalarT> > > dep_fields, std::map<std::string, Teuchos::RCP<PHX::MDField<ScalarT> > > eval_fields) { // extract dependent MDFields PHX::MDField<ScalarT> strain = *dep_fields["Strain"]; PHX::MDField<ScalarT> poissons_ratio = *dep_fields["Poissons Ratio"]; PHX::MDField<ScalarT> elastic_modulus = *dep_fields["Elastic Modulus"]; // retrieve appropriate field name strings std::string cauchy_string = (*field_name_map_)["Cauchy_Stress"]; std::string strain_string = (*field_name_map_)["Strain"]; std::string eqps_string = (*field_name_map_)["eqps"]; std::string friction_string = (*field_name_map_)["Friction_Parameter"]; // extract evaluated MDFields PHX::MDField<ScalarT> stress = *eval_fields[cauchy_string]; PHX::MDField<ScalarT> eqps = *eval_fields[eqps_string]; PHX::MDField<ScalarT> friction = *eval_fields[friction_string]; PHX::MDField<ScalarT> tangent = *eval_fields["Material Tangent"]; // get State Variables Albany::MDArray strainold = (*workset.stateArrayPtr)[strain_string + "_old"]; Albany::MDArray stressold = (*workset.stateArrayPtr)[cauchy_string + "_old"]; Albany::MDArray eqpsold = (*workset.stateArrayPtr)[eqps_string + "_old"]; Albany::MDArray frictionold = (*workset.stateArrayPtr)[friction_string + "_old"]; Intrepid::Tensor<ScalarT> id(Intrepid::eye<ScalarT>(num_dims_)); Intrepid::Tensor4<ScalarT> id1(Intrepid::identity_1<ScalarT>(num_dims_)); Intrepid::Tensor4<ScalarT> id2(Intrepid::identity_2<ScalarT>(num_dims_)); Intrepid::Tensor4<ScalarT> id3(Intrepid::identity_3<ScalarT>(num_dims_)); Intrepid::Tensor4<ScalarT> Celastic (num_dims_); Intrepid::Tensor<ScalarT> sigma(num_dims_), sigmaN(num_dims_), s(num_dims_); Intrepid::Tensor<ScalarT> epsilon(num_dims_), epsilonN(num_dims_); Intrepid::Tensor<ScalarT> depsilon(num_dims_); Intrepid::Tensor<ScalarT> nhat(num_dims_); ScalarT lambda, mu, kappa; ScalarT alpha, alphaN; ScalarT p, q, ptr, qtr; ScalarT eq, eqN, deq; ScalarT snorm; ScalarT Phi; //local unknowns and residual vectors std::vector<ScalarT> X(4); std::vector<ScalarT> R(4); std::vector<ScalarT> dRdX(16); for (std::size_t cell(0); cell < workset.numCells; ++cell) { for (std::size_t pt(0); pt < num_pts_; ++pt) { lambda = ( elastic_modulus(cell,pt) * poissons_ratio(cell,pt) ) / ( ( 1 + poissons_ratio(cell,pt) ) * ( 1 - 2 * poissons_ratio(cell,pt) ) ); mu = elastic_modulus(cell,pt) / ( 2 * ( 1 + poissons_ratio(cell,pt) ) ); kappa = lambda + 2.0 * mu / 3.0; // 4-th order elasticity tensor Celastic = lambda * id3 + mu * (id1 + id2); // previous state (the fill doesn't work for state virable) //sigmaN.fill( &stressold(cell,pt,0,0) ); //epsilonN.fill( &strainold(cell,pt,0,0) ); for (std::size_t i(0); i < num_dims_; ++i) { for (std::size_t j(0); j < num_dims_; ++j) { sigmaN(i, j) = stressold(cell, pt, i, j); epsilonN(i, j) = strainold(cell, pt, i, j); //epsilon(i,j) = strain(cell,pt,i,j); } } epsilon.fill( &strain(cell,pt,0,0) ); depsilon = epsilon - epsilonN; alphaN = frictionold(cell,pt); eqN = eqpsold(cell,pt); // trial state sigma = sigmaN + Intrepid::dotdot(Celastic,depsilon); ptr = Intrepid::trace(sigma) / 3.0; s = sigma - ptr * id; snorm = Intrepid::dotdot(s,s); if(snorm > 0) snorm = std::sqrt(snorm); qtr = sqrt(3.0/2.0) * snorm; // unit deviatoric tensor if (snorm > 0){ nhat = s / snorm; } else{ nhat = id; } // check yielding Phi = qtr + alphaN * ptr - Cf_; alpha = alphaN; p = ptr; q = qtr; deq = 0.0; if(Phi > 1.0e-12) {// plastic yielding // initialize local unknown vector X[0] = ptr; X[1] = qtr; X[2] = alpha; X[3] = deq; LocalNonlinearSolver<EvalT, Traits> solver; int iter = 0; ScalarT norm_residual0(0.0), norm_residual(0.0), relative_residual(0.0); // local N-R loop while (true) { ResidualJacobian(X, R, dRdX, ptr, qtr, eqN, mu, kappa); norm_residual = 0.0; for (int i = 0; i < 4; i++) norm_residual += R[i] * R[i]; norm_residual = std::sqrt(norm_residual); if (iter == 0) norm_residual0 = norm_residual; if (norm_residual0 != 0) relative_residual = norm_residual / norm_residual0; else relative_residual = norm_residual0; //std::cout << iter << " " //<< Sacado::ScalarValue<ScalarT>::eval(norm_residual) //<< " " << Sacado::ScalarValue<ScalarT>::eval(relative_residual) //<< std::endl; if (relative_residual < 1.0e-11 || norm_residual < 1.0e-11) break; if (iter > 20) break; // call local nonlinear solver solver.solve(dRdX, X, R); iter++; } // end of local N-R loop // compute sensitivity information w.r.t. system parameters // and pack the sensitivity back to X solver.computeFadInfo(dRdX, X, R); // update p = X[0]; q = X[1]; alpha = X[2]; deq = X[3]; }//end plastic yielding eq = eqN + deq; s = sqrt(2.0/3.0) * q * nhat; sigma = s + p * id; eqps(cell, pt) = eq; friction(cell,pt) = alpha; for (std::size_t i(0); i < num_dims_; ++i) { for (std::size_t j(0); j < num_dims_; ++j) { stress(cell,pt,i,j) = sigma(i, j); } } }// end loop over pt } // end loop over cell }