LIB_EXPORT rc_t CC TableReaderRefSeq_MakePath(const TableReaderRefSeq** cself, const VDBManager* vmgr,
const char* path, uint32_t options, size_t cache)
{
rc_t rc = 0;
const VTable* tbl = NULL;
if( vmgr == NULL || path == NULL ) {
rc = RC(rcAlign, rcType, rcConstructing, rcParam, rcNull);
} else if( (rc = VDBManagerOpenTableRead(vmgr, &tbl, NULL, "%s", path)) == 0 ) {
rc = TableReaderRefSeq_MakeTable(cself, vmgr, tbl, options, cache);
VTableRelease(tbl);
}
if( rc == 0 ) {
/* ALIGN_DBG("table %s opened 0x%p", path, *cself); */
} else {
ALIGN_DBGERRP("table for %s", rc, path);
}
return rc;
}
static rc_t RefSeq_RefSeq_odd_open(RefSeq *const super, RefSeqMgr const *const mgr)
{
struct RefSeq_RefSeq *const self = &super->u.refSeq;
VTable const *tbl;
rc_t rc = VDBManagerOpenTableRead(mgr->vmgr, &tbl, NULL, "ncbi-acc:%s?vdb-ctx=refseq", self->name);
if (tbl) {
char scheme[1024];
get_tbl_schema_info(tbl, sizeof(scheme), scheme);
if (strcmp(scheme, "NCBI:refseq:tbl:reference") == 0) {
rc = TableReaderRefSeq_MakeTable(&self->reader, mgr->vmgr, tbl,
mgr->reader_options, mgr->cache);
}
else {
rc = RC(rcAlign, rcTable, rcOpening, rcType, rcInvalid);
}
VTableRelease(tbl);
}
return rc;
}
