/*-------------------------------------------------------------------------
* Function: read_records
*
* Purpose: For a given dataset, checks to make sure that the stated
* and actual sizes are the same. If they are not, then
* we have an inconsistent dataset due to a SWMR error.
*
* Parameters: const char *filename
* The SWMR test file's name.
*
* unsigned verbose
* Whether verbose console output is desired.
*
* unsigned long nrecords
* The total number of records to read.
*
* unsigned poll_time
* The amount of time to sleep (s).
*
* unsigned reopen_count
*
*
* Return: Success: 0
* Failure: -1
*
*-------------------------------------------------------------------------
*/
static int
read_records(const char *filename, unsigned verbose, unsigned long nrecords,
unsigned poll_time, unsigned reopen_count)
{
hid_t fid; /* File ID */
hid_t aid; /* Attribute ID */
time_t start_time; /* Starting time */
hid_t mem_sid; /* Memory dataspace ID */
symbol_t record; /* The record to add to the dataset */
unsigned seed; /* Seed for random number generator */
unsigned iter_to_reopen = reopen_count; /* # of iterations until reopen */
unsigned long u; /* Local index variable */
hid_t fapl;
HDassert(filename);
HDassert(poll_time != 0);
/* Create file access property list */
if((fapl = h5_fileaccess()) < 0)
return -1;
H5Pset_fclose_degree(fapl, H5F_CLOSE_SEMI);
/* Emit informational message */
if(verbose)
HDfprintf(stderr, "Opening file: %s\n", filename);
/* Open the file */
if((fid = H5Fopen(filename, H5F_ACC_RDONLY | H5F_ACC_SWMR_READ, fapl)) < 0)
return -1;
/* Seed the random number generator with the attribute in the file */
if((aid = H5Aopen(fid, "seed", H5P_DEFAULT)) < 0)
return -1;
if(H5Aread(aid, H5T_NATIVE_UINT, &seed) < 0)
return -1;
if(H5Aclose(aid) < 0)
return -1;
HDsrandom(seed);
/* Reset the record */
/* (record's 'info' field might need to change for each record written, also) */
HDmemset(&record, 0, sizeof(record));
/* Create a dataspace for the record to read */
if((mem_sid = H5Screate(H5S_SCALAR)) < 0)
return -1;
/* Emit informational message */
if(verbose)
HDfprintf(stderr, "Reading records\n");
/* Get the starting time */
start_time = HDtime(NULL);
/* Read records */
for(u = 0; u < nrecords; u++) {
symbol_info_t *symbol = NULL; /* Symbol (dataset) */
htri_t attr_exists; /* Whether the sequence number attribute exists */
unsigned long file_u; /* Attribute sequence number (writer's "u") */
/* Get a random dataset, according to the symbol distribution */
symbol = choose_dataset();
/* Fill in "nrecords" field. Note that this depends on the writer
* using the same algorithm and "nrecords" */
symbol->nrecords = nrecords / 5;
/* Wait until we can read the dataset */
do {
/* Check if sequence attribute exists */
if((attr_exists = H5Aexists_by_name(fid, symbol->name, "seq", H5P_DEFAULT)) < 0)
return -1;
if(attr_exists) {
/* Read sequence number attribute */
if((aid = H5Aopen_by_name(fid, symbol->name, "seq", H5P_DEFAULT, H5P_DEFAULT)) < 0)
return -1;
if(H5Aread(aid, H5T_NATIVE_ULONG, &file_u) < 0)
return -1;
if(H5Aclose(aid) < 0)
return -1;
/* Check if sequence number is at least u - if so, this should
* guarantee that this record has been written */
if(file_u >= u)
break;
} /* end if */
/* Check for timeout */
if(HDtime(NULL) >= (time_t)(start_time + (time_t)TIMEOUT)) {
HDfprintf(stderr, "Reader timed out\n");
return -1;
} /* end if */
/* Pause */
HDsleep(poll_time);
/* Retrieve and print the collection of metadata read retries */
if(print_metadata_retries_info(fid) < 0)
HDfprintf(stderr, "Warning: could not obtain metadata retries info\n");
/* Reopen the file */
if(H5Fclose(fid) < 0)
return -1;
if((fid = H5Fopen(filename, H5F_ACC_RDONLY | H5F_ACC_SWMR_READ, fapl)) < 0)
return -1;
iter_to_reopen = reopen_count;
} while(1);
/* Emit informational message */
if(verbose)
HDfprintf(stderr, "Checking dataset %lu\n", u);
/* Check dataset */
if(check_dataset(fid, verbose, symbol, &record, mem_sid) < 0)
return -1;
HDmemset(&record, 0, sizeof(record));
/* Check for reopen */
iter_to_reopen--;
if(iter_to_reopen == 0) {
/* Emit informational message */
if(verbose)
HDfprintf(stderr, "Reopening file: %s\n", filename);
/* Retrieve and print the collection of metadata read retries */
if(print_metadata_retries_info(fid) < 0)
HDfprintf(stderr, "Warning: could not obtain metadata retries info\n");
/* Reopen the file */
if(H5Fclose(fid) < 0)
return -1;
if((fid = H5Fopen(filename, H5F_ACC_RDONLY | H5F_ACC_SWMR_READ, fapl)) < 0)
return -1;
iter_to_reopen = reopen_count;
} /* end if */
} /* end while */
/* Retrieve and print the collection of metadata read retries */
if(print_metadata_retries_info(fid) < 0)
HDfprintf(stderr, "Warning: could not obtain metadata retries info\n");
/* Close file */
if(H5Fclose(fid) < 0)
return -1;
/* Close the memory dataspace */
if(H5Sclose(mem_sid) < 0)
return -1;
return 0;
} /* end read_records() */
/*-------------------------------------------------------------------------
* Function: addrem_records
*
* Purpose: Adds/removes a specified number of records to random datasets
* to the SWMR test file.
*
* Parameters: hid_t fid
* The file ID of the SWMR HDF5 file
*
* unsigned verbose
* Whether or not to emit verbose console messages
*
* unsigned long nops
* # of records to read/write in the datasets
*
* unsigned long flush_count
* # of records to write before flushing the file to disk
*
* Return: Success: 0
* Failure: -1
*
*-------------------------------------------------------------------------
*/
static int
addrem_records(hid_t fid, unsigned verbose, unsigned long nops, unsigned long flush_count)
{
hid_t tid; /* Datatype ID for records */
hid_t mem_sid; /* Memory dataspace ID */
hsize_t start[2] = {0, 0}, count[2] = {1, 1}; /* Hyperslab selection values */
hsize_t dim[2] = {1, 0}; /* Dataspace dimensions */
symbol_t buf[MAX_SIZE_CHANGE]; /* Write buffer */
H5AC_cache_config_t mdc_config_orig; /* Original metadata cache configuration */
H5AC_cache_config_t mdc_config_cork; /* Corked metadata cache configuration */
unsigned long op_to_flush; /* # of operations before flush */
unsigned long u, v; /* Local index variables */
assert(fid > 0);
/* Reset the buffer */
memset(&buf, 0, sizeof(buf));
/* Create a dataspace for the record to add */
if((mem_sid = H5Screate_simple(2, count, NULL)) < 0)
return -1;
/* Create datatype for appending records */
if((tid = create_symbol_datatype()) < 0)
return -1;
/* Get the current metadata cache configuration, and set up the corked
* configuration */
mdc_config_orig.version = H5AC__CURR_CACHE_CONFIG_VERSION;
if(H5Fget_mdc_config(fid, &mdc_config_orig) < 0)
return -1;
memcpy(&mdc_config_cork, &mdc_config_orig, sizeof(mdc_config_cork));
mdc_config_cork.evictions_enabled = FALSE;
mdc_config_cork.incr_mode = H5C_incr__off;
mdc_config_cork.flash_incr_mode = H5C_flash_incr__off;
mdc_config_cork.decr_mode = H5C_decr__off;
/* Add and remove records to random datasets, according to frequency
* distribution */
op_to_flush = flush_count;
for(u=0; u<nops; u++) {
symbol_info_t *symbol; /* Symbol to write record to */
hid_t file_sid; /* Dataset's space ID */
/* Get a random dataset, according to the symbol distribution */
symbol = choose_dataset();
/* Decide whether to shrink or expand, and by how much */
count[1] = (hsize_t)random() % (MAX_SIZE_CHANGE * 2) + 1;
if(count[1] > MAX_SIZE_CHANGE) {
/* Add records */
count[1] -= MAX_SIZE_CHANGE;
/* Set the buffer's IDs (equal to its position) */
for(v=0; v<count[1]; v++)
buf[v].rec_id = (uint64_t)symbol->nrecords + (uint64_t)v;
/* Set the memory space to the correct size */
if(H5Sset_extent_simple(mem_sid, 2, count, NULL) < 0)
return -1;
/* Get the coordinates to write */
start[1] = symbol->nrecords;
/* Cork the metadata cache, to prevent the object header from being
* flushed before the data has been written */
/*if(H5Fset_mdc_config(fid, &mdc_config_cork) < 0)
return(-1);*/
/* Extend the dataset's dataspace to hold the new record */
symbol->nrecords+= count[1];
dim[1] = symbol->nrecords;
if(H5Dset_extent(symbol->dsid, dim) < 0)
return -1;
/* Get the dataset's dataspace */
if((file_sid = H5Dget_space(symbol->dsid)) < 0)
return -1;
/* Choose the last record in the dataset */
if(H5Sselect_hyperslab(file_sid, H5S_SELECT_SET, start, NULL, count, NULL) < 0)
return -1;
/* Write record to the dataset */
if(H5Dwrite(symbol->dsid, tid, mem_sid, file_sid, H5P_DEFAULT, &buf) < 0)
return -1;
/* Uncork the metadata cache */
/*if(H5Fset_mdc_config(fid, &mdc_config_orig) < 0)
return -1;*/
/* Close the dataset's dataspace */
if(H5Sclose(file_sid) < 0)
return -1;
} /* end if */
else {
/* Shrink the dataset's dataspace */
if(count[1] > symbol->nrecords)
symbol->nrecords = 0;
else
symbol->nrecords -= count[1];
dim[1] = symbol->nrecords;
if(H5Dset_extent(symbol->dsid, dim) < 0)
return -1;
} /* end else */
/* Check for flushing file */
if(flush_count > 0) {
/* Decrement count of records to write before flushing */
op_to_flush--;
/* Check for counter being reached */
if(0 == op_to_flush) {
/* Flush contents of file */
if(H5Fflush(fid, H5F_SCOPE_GLOBAL) < 0)
return -1;
/* Reset flush counter */
op_to_flush = flush_count;
} /* end if */
} /* end if */
} /* end for */
/* Emit informational message */
if(verbose)
fprintf(stderr, "Closing datasets\n");
/* Close the datasets */
for(u = 0; u < NLEVELS; u++)
for(v = 0; v < symbol_count[u]; v++)
if(H5Dclose(symbol_info[u][v].dsid) < 0)
return -1;
return 0;
}
/*-------------------------------------------------------------------------
* Function: add_records
*
* Purpose: Writes a specified number of records to random datasets in
* the SWMR test file.
*
* Parameters: hid_t fid
* The file ID of the SWMR HDF5 file
*
* unsigned verbose
* Whether or not to emit verbose console messages
*
* unsigned long nrecords
* # of records to write to the datasets
*
* unsigned long flush_count
* # of records to write before flushing the file to disk
*
* Return: Success: 0
* Failure: -1
*
*-------------------------------------------------------------------------
*/
static int
add_records(hid_t fid, unsigned verbose, unsigned long nrecords, unsigned long flush_count)
{
hid_t tid; /* Datatype ID for records */
hid_t mem_sid; /* Memory dataspace ID */
hsize_t start[2] = {0, 0}; /* Hyperslab selection values */
hsize_t count[2] = {1, 1}; /* Hyperslab selection values */
symbol_t record; /* The record to add to the dataset */
H5AC_cache_config_t mdc_config_orig; /* Original metadata cache configuration */
H5AC_cache_config_t mdc_config_cork; /* Corked metadata cache configuration */
unsigned long rec_to_flush; /* # of records left to write before flush */
volatile int dummy; /* Dummy varialbe for busy sleep */
hsize_t dim[2] = {1,0}; /* Dataspace dimensions */
unsigned long u, v; /* Local index variables */
HDassert(fid >= 0);
/* Reset the record */
/* (record's 'info' field might need to change for each record written, also) */
HDmemset(&record, 0, sizeof(record));
/* Create a dataspace for the record to add */
if((mem_sid = H5Screate(H5S_SCALAR)) < 0)
return -1;
/* Create datatype for appending records */
if((tid = create_symbol_datatype()) < 0)
return -1;
/* Get the current metadata cache configuration, and set up the corked
* configuration */
mdc_config_orig.version = H5AC__CURR_CACHE_CONFIG_VERSION;
if(H5Fget_mdc_config(fid, &mdc_config_orig) < 0)
return -1;
HDmemcpy(&mdc_config_cork, &mdc_config_orig, sizeof(mdc_config_cork));
mdc_config_cork.evictions_enabled = FALSE;
mdc_config_cork.incr_mode = H5C_incr__off;
mdc_config_cork.flash_incr_mode = H5C_flash_incr__off;
mdc_config_cork.decr_mode = H5C_decr__off;
/* Add records to random datasets, according to frequency distribution */
rec_to_flush = flush_count;
for(u = 0; u < nrecords; u++) {
symbol_info_t *symbol; /* Symbol to write record to */
hid_t file_sid; /* Dataset's space ID */
hid_t aid; /* Attribute ID */
/* Get a random dataset, according to the symbol distribution */
symbol = choose_dataset();
/* Cork the metadata cache, to prevent the object header from being
* flushed before the data has been written */
/*if(H5Fset_mdc_config(fid, &mdc_config_cork) < 0)
return(-1);*/
/* If this is the first time the dataset has been opened, extend it and
* add the sequence attribute */
if(symbol->nrecords == 0) {
symbol->nrecords = nrecords / 5;
dim[1] = symbol->nrecords;
if(H5Dset_extent(symbol->dsid, dim) < 0)
return -1;
if((file_sid = H5Screate(H5S_SCALAR)) < 0)
return -1;
if((aid = H5Acreate2(symbol->dsid, "seq", H5T_NATIVE_ULONG, file_sid, H5P_DEFAULT, H5P_DEFAULT)) < 0)
return -1;
if(H5Sclose(file_sid) < 0)
return -1;
} /* end if */
else if((aid = H5Aopen(symbol->dsid, "seq", H5P_DEFAULT)) < 0)
return -1;
/* Get the coordinate to write */
start[1] = (hsize_t)HDrandom() % symbol->nrecords;
/* Set the record's ID (equal to its position) */
record.rec_id = start[1];
/* Get the dataset's dataspace */
if((file_sid = H5Dget_space(symbol->dsid)) < 0)
return -1;
/* Choose a random record in the dataset */
if(H5Sselect_hyperslab(file_sid, H5S_SELECT_SET, start, NULL, count, NULL) < 0)
return -1;
/* Write record to the dataset */
if(H5Dwrite(symbol->dsid, tid, mem_sid, file_sid, H5P_DEFAULT, &record) < 0)
return -1;
/* Write the sequence number attribute. Since we synchronize the random
* number seed, the readers will always generate the same sequence of
* randomly chosen datasets and offsets. Therefore, and because of the
* flush dependencies on the object header, the reader will be
* guaranteed to see the written data if the sequence attribute is >=u.
*/
if(H5Awrite(aid, H5T_NATIVE_ULONG, &u) < 0)
return -1;
/* Close the attribute */
if(H5Aclose(aid) < 0)
return -1;
/* Uncork the metadata cache */
/*if(H5Fset_mdc_config(fid, &mdc_config_orig) < 0)
return(-1);*/
/* Close the dataset's dataspace */
if(H5Sclose(file_sid) < 0)
return -1;
/* Check for flushing file */
if(flush_count > 0) {
/* Decrement count of records to write before flushing */
rec_to_flush--;
/* Check for counter being reached */
if(0 == rec_to_flush) {
/* Flush contents of file */
if(H5Fflush(fid, H5F_SCOPE_GLOBAL) < 0)
return -1;
/* Reset flush counter */
rec_to_flush = flush_count;
} /* end if */
} /* end if */
#ifdef OUT
/* Busy wait, to let readers catch up */
/* If this is removed, also remove the BUSY_WAIT symbol
* at the top of the file.
*/
dummy = 0;
for(v=0; v<BUSY_WAIT; v++)
dummy++;
if((unsigned long)dummy != v)
return -1;
#endif /* OUT */
} /* end for */
/* Close the memory dataspace */
if(H5Sclose(mem_sid) < 0)
return -1;
/* Close the datatype */
if(H5Tclose(tid) < 0)
return -1;
/* Emit informational message */
if(verbose)
fprintf(stderr, "Closing datasets\n");
/* Close the datasets */
for(u = 0; u < NLEVELS; u++)
for(v = 0; v < symbol_count[u]; v++)
if(H5Dclose(symbol_info[u][v].dsid) < 0)
return -1;
return 0;
}
