示例#1
0
文件: plu_solve.c 项目: alucas/StarPU
TYPE *STARPU_PLU(reconstruct_matrix)(unsigned size, unsigned nblocks)
{
//	fprintf(stderr, "RECONSTRUCT MATRIX size %d nblocks %d\n", size, nblocks);

	TYPE *bigmatrix = calloc(size*size, sizeof(TYPE));

	unsigned block_size = size/nblocks;

	int rank;
	MPI_Comm_rank(MPI_COMM_WORLD, &rank);

	unsigned bi, bj;
	for (bj = 0; bj < nblocks; bj++)
	for (bi = 0; bi < nblocks; bi++)
	{
		TYPE *block;

		int block_rank = get_block_rank(bi, bj);
		
		if (block_rank == 0)
		{
			block = STARPU_PLU(get_block)(bi, bj);
		}
		else {
			MPI_Status status;

			if (rank == 0)
			{
				block = calloc(block_size*block_size, sizeof(TYPE));

				int ret = MPI_Recv(block, block_size*block_size, MPI_TYPE, block_rank, 0, MPI_COMM_WORLD, &status);
				STARPU_ASSERT(ret == MPI_SUCCESS);
			}
			else if (rank == block_rank) {
				block = STARPU_PLU(get_block)(bi, bj);
				int ret = MPI_Send(block, block_size*block_size, MPI_TYPE, 0, 0, MPI_COMM_WORLD);
				STARPU_ASSERT(ret == MPI_SUCCESS);
			}
		}

		if (rank == 0)
		{
			unsigned j, i;
			for (j = 0; j < block_size; j++)
			for (i = 0; i < block_size; i++)
			{
				bigmatrix[(j + bj*block_size)+(i+bi*block_size)*size] =
									block[j+i*block_size];
			}

			if (get_block_rank(bi, bj) != 0)
				free(block);
		}
	}

	return bigmatrix;
}
示例#2
0
static unsigned tmp_21_block_is_needed(int rank, unsigned pnblocks, unsigned i)
{
	unsigned j;
	for (j = 1; j < pnblocks; j++)
	{
		if (get_block_rank(i, j) == rank)
			return 1;
	}

	return 0;
}
示例#3
0
static unsigned tmp_12_block_is_needed(int rank, unsigned pnblocks, unsigned j)
{
	unsigned i;
	for (i = 1; i < pnblocks; i++)
	{
		if (get_block_rank(i, j) == rank)
			return 1;
	}

	return 0;
}
示例#4
0
文件: plu_solve.c 项目: alucas/StarPU
/* x and y must be valid (at least) on 0 */
void STARPU_PLU(compute_ax)(unsigned size, TYPE *x, TYPE *y, unsigned nblocks, int rank)
{
	unsigned block_size = size/nblocks;

	/* Send x to everyone */
	int bcst_ret;
	bcst_ret = MPI_Bcast(&x, size, MPI_TYPE, 0, MPI_COMM_WORLD);
	STARPU_ASSERT(bcst_ret == MPI_SUCCESS);

	/* Create temporary buffers where all MPI processes are going to
	 * compute Ai x = yi where Ai is the matrix containing the blocks of A
	 * affected to process i, and 0 everywhere else. We then have y as the
	 * sum of all yi. */
	TYPE *yi = calloc(size, sizeof(TYPE));

	/* Compute Aix = yi */
	unsigned long i,j;
	for (j = 0; j < nblocks; j++)
	{
		for (i = 0; i < nblocks; i++)
		{
			if (get_block_rank(i, j) == rank)
			{
				/* That block belongs to the current MPI process */
				TYPE *block_data = STARPU_PLU(get_block)(i, j);
				TYPE *sub_x = &x[i*block_size];
				TYPE *sub_yi = &yi[j*block_size];

				STARPU_PLU(compute_ax_block)(block_size, block_data, sub_x, sub_yi);
			}
		}
	}

	/* Compute the Sum of all yi = y */
	MPI_Reduce(yi, y, size, MPI_TYPE, MPI_SUM, 0, MPI_COMM_WORLD);

	fprintf(stderr, "RANK %d - FOO 1 y[0] %f\n", rank, y[0]);

	free(yi);
}
示例#5
0
static void display_grid(int rank, unsigned pnblocks)
{
	if (!display)
		return;

	//if (rank == 0)
	{
		fprintf(stderr, "2D grid layout (Rank %d): \n", rank);

		unsigned i, j;
		for (j = 0; j < pnblocks; j++)
		{
			for (i = 0; i < pnblocks; i++)
			{
				TYPE *blockptr = STARPU_PLU(get_block)(i, j);
				starpu_data_handle_t handle = STARPU_PLU(get_block_handle)(i, j);

				fprintf(stderr, "%d (data %p handle %p)", get_block_rank(i, j), blockptr, handle);
			}
			fprintf(stderr, "\n");
		}
	}
}
示例#6
0
文件: plu_solve.c 项目: alucas/StarPU
void STARPU_PLU(compute_lux)(unsigned size, TYPE *x, TYPE *y, unsigned nblocks, int rank)
{
	/* Create temporary buffers where all MPI processes are going to
	 * compute Ui x = yi where Ai is the matrix containing the blocks of U
	 * affected to process i, and 0 everywhere else. We then have y as the
	 * sum of all yi. */
	TYPE *yi = calloc(size, sizeof(TYPE));

	fprintf(stderr, "Compute LU\n");

	unsigned block_size = size/nblocks;

	/* Compute UiX = Yi */
	unsigned long i,j;
	for (j = 0; j < nblocks; j++)
	{
		if (get_block_rank(j, j) == rank)
		{
			TYPE *block_data = STARPU_PLU(get_block)(j, j);
			TYPE *sub_x = &x[j*(block_size)];
			TYPE *sub_yi = &yi[j*(block_size)];

			STARPU_PLU(compute_ax_block_upper)(size, nblocks, block_data, sub_x, sub_yi);
		}

		for (i = j + 1; i < nblocks; i++)
		{
			if (get_block_rank(i, j) == rank)
			{
				/* That block belongs to the current MPI process */
				TYPE *block_data = STARPU_PLU(get_block)(i, j);
				TYPE *sub_x = &x[i*(block_size)];
				TYPE *sub_yi = &yi[j*(block_size)];

				STARPU_PLU(compute_ax_block)(size/nblocks, block_data, sub_x, sub_yi);
			}
		}
	}

	/* Grab Sum Yi in X */
	MPI_Reduce(yi, x, size, MPI_TYPE, MPI_SUM, 0, MPI_COMM_WORLD);
	memset(yi, 0, size*sizeof(TYPE));

	unsigned ind;
//	if (rank == 0)
//	{
//		fprintf(stderr, "INTERMEDIATE\n");
//		for (ind = 0; ind < STARPU_MIN(10, size); ind++)
//		{
//			fprintf(stderr, "x[%d] = %f\n", ind, (float)x[ind]);
//		}
//		fprintf(stderr, "****\n");
//	}

	/* Everyone needs x */
	int bcst_ret;
	bcst_ret = MPI_Bcast(&x, size, MPI_TYPE, 0, MPI_COMM_WORLD);
	STARPU_ASSERT(bcst_ret == MPI_SUCCESS);

	/* Compute LiX = Yi (with X = UX) */
	for (j = 0; j < nblocks; j++)
	{
		if (j > 0)
		for (i = 0; i < j; i++)
		{
			if (get_block_rank(i, j) == rank)
			{
				/* That block belongs to the current MPI process */
				TYPE *block_data = STARPU_PLU(get_block)(i, j);
				TYPE *sub_x = &x[i*(block_size)];
				TYPE *sub_yi = &yi[j*(block_size)];

				STARPU_PLU(compute_ax_block)(size/nblocks, block_data, sub_x, sub_yi);
			}
		}

		if (get_block_rank(j, j) == rank)
		{
			TYPE *block_data = STARPU_PLU(get_block)(j, j);
			TYPE *sub_x = &x[j*(block_size)];
			TYPE *sub_yi = &yi[j*(block_size)];

			STARPU_PLU(compute_ax_block_lower)(size, nblocks, block_data, sub_x, sub_yi);
		}
	}

	/* Grab Sum Yi in Y */
	MPI_Reduce(yi, y, size, MPI_TYPE, MPI_SUM, 0, MPI_COMM_WORLD);

	free(yi);
}
示例#7
0
static void init_matrix(int rank)
{
#ifdef STARPU_HAVE_LIBNUMA
	if (numa)
	{
		fprintf(stderr, "Using INTERLEAVE policy\n");
		unsigned long nodemask = ((1<<0)|(1<<1));
		int ret = set_mempolicy(MPOL_INTERLEAVE, &nodemask, 3);
		if (ret)
			perror("set_mempolicy failed");
	}
#endif

	/* Allocate a grid of data handles, not all of them have to be allocated later on */
	dataA_handles = calloc(nblocks*nblocks, sizeof(starpu_data_handle_t));
	dataA = calloc(nblocks*nblocks, sizeof(TYPE *));
	allocated_memory_extra += nblocks*nblocks*(sizeof(starpu_data_handle_t) + sizeof(TYPE *));

	size_t blocksize = (size_t)(size/nblocks)*(size/nblocks)*sizeof(TYPE);

	/* Allocate all the blocks that belong to this mpi node */
	unsigned long i,j;
	for (j = 0; j < nblocks; j++)
	{
		for (i = 0; i < nblocks; i++)
		{
			TYPE **blockptr = &dataA[j+i*nblocks];
//			starpu_data_handle_t *handleptr = &dataA_handles[j+nblocks*i];
			starpu_data_handle_t *handleptr = &dataA_handles[j+nblocks*i];

			if (get_block_rank(i, j) == rank)
			{
				/* This blocks should be treated by the current MPI process */
				/* Allocate and fill it */
				starpu_malloc((void **)blockptr, blocksize);
				allocated_memory += blocksize;

				//fprintf(stderr, "Rank %d : fill block (i = %d, j = %d)\n", rank, i, j);
				fill_block_with_random(*blockptr, size, nblocks);
				//fprintf(stderr, "Rank %d : fill block (i = %d, j = %d)\n", rank, i, j);
				if (i == j)
				{
					unsigned tmp;
					for (tmp = 0; tmp < size/nblocks; tmp++)
					{
						(*blockptr)[tmp*((size/nblocks)+1)] += (TYPE)10*nblocks;
					}
				}

				/* Register it to StarPU */
				starpu_matrix_data_register(handleptr, STARPU_MAIN_RAM,
					(uintptr_t)*blockptr, size/nblocks,
					size/nblocks, size/nblocks, sizeof(TYPE));
			}
			else {
				*blockptr = STARPU_POISON_PTR;
				*handleptr = STARPU_POISON_PTR;
			}
		}
	}

	/* Allocate the temporary buffers required for the distributed algorithm */

	unsigned k;

	/* tmp buffer 11 */
#ifdef SINGLE_TMP11
	starpu_malloc((void **)&tmp_11_block, blocksize);
	allocated_memory_extra += blocksize;
	starpu_matrix_data_register(&tmp_11_block_handle, STARPU_MAIN_RAM, (uintptr_t)tmp_11_block,
			size/nblocks, size/nblocks, size/nblocks, sizeof(TYPE));
#else
	tmp_11_block_handles = calloc(nblocks, sizeof(starpu_data_handle_t));
	tmp_11_block = calloc(nblocks, sizeof(TYPE *));
	allocated_memory_extra += nblocks*(sizeof(starpu_data_handle_t) + sizeof(TYPE *));

	for (k = 0; k < nblocks; k++)
	{
		if (tmp_11_block_is_needed(rank, nblocks, k))
		{
			starpu_malloc((void **)&tmp_11_block[k], blocksize);
			allocated_memory_extra += blocksize;
			STARPU_ASSERT(tmp_11_block[k]);

			starpu_matrix_data_register(&tmp_11_block_handles[k], STARPU_MAIN_RAM,
				(uintptr_t)tmp_11_block[k],
				size/nblocks, size/nblocks, size/nblocks, sizeof(TYPE));
		}
	}
#endif

	/* tmp buffers 12 and 21 */
#ifdef SINGLE_TMP1221
	tmp_12_block_handles = calloc(nblocks, sizeof(starpu_data_handle_t));
	tmp_21_block_handles = calloc(nblocks, sizeof(starpu_data_handle_t));
	tmp_12_block = calloc(nblocks, sizeof(TYPE *));
	tmp_21_block = calloc(nblocks, sizeof(TYPE *));

	allocated_memory_extra += 2*nblocks*(sizeof(starpu_data_handle_t) + sizeof(TYPE *));
#else
	for (i = 0; i < 2; i++) {
		tmp_12_block_handles[i] = calloc(nblocks, sizeof(starpu_data_handle_t));
		tmp_21_block_handles[i] = calloc(nblocks, sizeof(starpu_data_handle_t));
		tmp_12_block[i] = calloc(nblocks, sizeof(TYPE *));
		tmp_21_block[i] = calloc(nblocks, sizeof(TYPE *));

		allocated_memory_extra += 2*nblocks*(sizeof(starpu_data_handle_t) + sizeof(TYPE *));
	}
#endif

	for (k = 0; k < nblocks; k++)
	{
#ifdef SINGLE_TMP1221
		if (tmp_12_block_is_needed(rank, nblocks, k))
		{
			starpu_malloc((void **)&tmp_12_block[k], blocksize);
			allocated_memory_extra += blocksize;
			STARPU_ASSERT(tmp_12_block[k]);

			starpu_matrix_data_register(&tmp_12_block_handles[k], STARPU_MAIN_RAM,
				(uintptr_t)tmp_12_block[k],
				size/nblocks, size/nblocks, size/nblocks, sizeof(TYPE));
		}

		if (tmp_21_block_is_needed(rank, nblocks, k))
		{
			starpu_malloc((void **)&tmp_21_block[k], blocksize);
			allocated_memory_extra += blocksize;
			STARPU_ASSERT(tmp_21_block[k]);

			starpu_matrix_data_register(&tmp_21_block_handles[k], STARPU_MAIN_RAM,
				(uintptr_t)tmp_21_block[k],
				size/nblocks, size/nblocks, size/nblocks, sizeof(TYPE));
		}
#else
	for (i = 0; i < 2; i++) {
		if (tmp_12_block_is_needed(rank, nblocks, k))
		{
			starpu_malloc((void **)&tmp_12_block[i][k], blocksize);
			allocated_memory_extra += blocksize;
			STARPU_ASSERT(tmp_12_block[i][k]);

			starpu_matrix_data_register(&tmp_12_block_handles[i][k], STARPU_MAIN_RAM,
				(uintptr_t)tmp_12_block[i][k],
				size/nblocks, size/nblocks, size/nblocks, sizeof(TYPE));
		}

		if (tmp_21_block_is_needed(rank, nblocks, k))
		{
			starpu_malloc((void **)&tmp_21_block[i][k], blocksize);
			allocated_memory_extra += blocksize;
			STARPU_ASSERT(tmp_21_block[i][k]);

			starpu_matrix_data_register(&tmp_21_block_handles[i][k], STARPU_MAIN_RAM,
				(uintptr_t)tmp_21_block[i][k],
				size/nblocks, size/nblocks, size/nblocks, sizeof(TYPE));
		}
	}
#endif
	}

	//display_all_blocks(nblocks, size/nblocks);
}