C++ (Cpp) gt_filllargestchartable示例

示例#1

文件： sfx-mappedstr.c 项目： AlexWoroschilow/uni_hamburg

static GtKmerstream *kmerstream_new(unsigned int numofchars,
                                    unsigned int kmersize)
{
  GtKmerstream *spwp;

  gt_assert(kmersize <= (unsigned int) MAXPREFIXLENGTH);
  spwp = gt_malloc(sizeof (*spwp));
  spwp->multimappower = gt_initmultimappower(numofchars,kmersize);
  kmerstream_init(spwp, numofchars, kmersize);
  special_queue_init(&spwp->specialqueue,kmersize);
  spwp->filltable = gt_filllargestchartable(numofchars,kmersize);
  return spwp;
}

示例#2

文件： sfx-mappedstr.c 项目： oeigenbrod/genometools

static Kmerstream *kmerstream_new(unsigned int numofchars,unsigned int kmersize)
{
  Kmerstream *spwp;

  gt_assert(kmersize <= (unsigned int) MAXPREFIXLENGTH);
  spwp = gt_malloc(sizeof (*spwp));
  spwp->multimappower = gt_initmultimappower(numofchars,kmersize);
  spwp->lengthwithoutspecial = 0;
  spwp->codewithoutspecial = 0;
  spwp->kmersize = kmersize;
  spwp->numofchars = numofchars;
  spwp->windowwidth = 0;
  spwp->firstindex = 0;
  specialemptyqueue(&spwp->spos,kmersize);
  spwp->filltable = gt_filllargestchartable(numofchars,kmersize);
  return spwp;
}