//----Constructors----//
GSEA::GSEA(const char* database_file_, const char* population_file_, const char* sample_file_)
: database_file(database_file_), population_file(population_file_), sample_file(sample_file_)
{
/*
This constructor handles the GSEA object.
Sets the given file paths.
Calls the make methods in sequence.
*/
clock_t tStart = clock();
make_population();
printf("make_population: %.2fs\n", (double)(clock() - tStart) / CLOCKS_PER_SEC);
clock_t tpop_suc = clock();
make_db_pop();
printf("population success: %.2fs\n", (double)(clock() - tpop_suc) / CLOCKS_PER_SEC);
clock_t tmake_sample = clock();
make_sample();
printf("make_sample: %.2fs\n", (double)(clock() - tmake_sample) / CLOCKS_PER_SEC);
clock_t tsample = clock();
make_result(sample);
printf("make_result: %.2fs\n", (double)(clock() - tsample) / CLOCKS_PER_SEC);
};
vector<Population> make_teams(size_t numTeams, size_t teamSize, PopulationLayout& pl) {
vector<Population> teams(numTeams);
size_t teamID = 0;
std::generate(teams.begin(), teams.end(), [&]() { return make_population(teamID++, pl); });
return teams;
}
