PetscErrorCode MatLUFactorSymbolic_SuperLU_DIST(Mat F,Mat A,IS r,IS c,const MatFactorInfo *info)
{
Mat_SuperLU_DIST *lu = (Mat_SuperLU_DIST*)F->spptr;
PetscInt M = A->rmap->N,N=A->cmap->N;
PetscFunctionBegin;
/* Initialize the SuperLU process grid. */
PetscStackCall("SuperLU_DIST:superlu_gridinit",superlu_gridinit(lu->comm_superlu, lu->nprow, lu->npcol, &lu->grid));
/* Initialize ScalePermstruct and LUstruct. */
PetscStackCall("SuperLU_DIST:ScalePermstructInit",ScalePermstructInit(M, N, &lu->ScalePermstruct));
PetscStackCall("SuperLU_DIST:LUstructInit",LUstructInit(M, N, &lu->LUstruct));
F->ops->lufactornumeric = MatLUFactorNumeric_SuperLU_DIST;
F->ops->solve = MatSolve_SuperLU_DIST;
F->ops->matsolve = MatMatSolve_SuperLU_DIST;
lu->CleanUpSuperLU_Dist = PETSC_TRUE;
PetscFunctionReturn(0);
}
int main(int argc, char *argv[])
{
superlu_options_t options;
SuperLUStat_t stat;
SuperMatrix A;
NRformat_loc *Astore;
ScalePermstruct_t ScalePermstruct;
LUstruct_t LUstruct;
SOLVEstruct_t SOLVEstruct;
gridinfo_t grid;
double *berr;
double *b, *b1, *xtrue, *nzval, *nzval1;
int_t *colind, *colind1, *rowptr, *rowptr1;
int_t i, j, m, n, nnz_loc, m_loc, fst_row;
int nprow, npcol;
int iam, info, ldb, ldx, nrhs;
char **cpp, c;
FILE *fp, *fopen();
nprow = 1; /* Default process rows. */
npcol = 1; /* Default process columns. */
nrhs = 1; /* Number of right-hand side. */
/* ------------------------------------------------------------
INITIALIZE MPI ENVIRONMENT.
------------------------------------------------------------*/
MPI_Init( &argc, &argv );
/* Parse command line argv[]. */
for (cpp = argv+1; *cpp; ++cpp) {
if ( **cpp == '-' ) {
c = *(*cpp+1);
++cpp;
switch (c) {
case 'h':
printf("Options:\n");
printf("\t-r <int>: process rows (default %d)\n", nprow);
printf("\t-c <int>: process columns (default %d)\n", npcol);
exit(0);
break;
case 'r': nprow = atoi(*cpp);
break;
case 'c': npcol = atoi(*cpp);
break;
}
} else { /* Last arg is considered a filename */
if ( !(fp = fopen(*cpp, "r")) ) {
ABORT("File does not exist");
}
break;
}
}
/* ------------------------------------------------------------
INITIALIZE THE SUPERLU PROCESS GRID.
------------------------------------------------------------*/
superlu_gridinit(MPI_COMM_WORLD, nprow, npcol, &grid);
/* Bail out if I do not belong in the grid. */
iam = grid.iam;
if ( iam >= nprow * npcol ) goto out;
if ( !iam ) {
printf("Input matrix file: %s\n", *cpp);
printf("\tProcess grid\t%d X %d\n", grid.nprow, grid.npcol);
}
#if ( DEBUGlevel>=1 )
CHECK_MALLOC(iam, "Enter main()");
#endif
/* ------------------------------------------------------------
GET THE MATRIX FROM FILE AND SETUP THE RIGHT HAND SIDE.
------------------------------------------------------------*/
dcreate_matrix(&A, nrhs, &b, &ldb, &xtrue, &ldx, fp, &grid);
if ( !(b1 = doubleMalloc_dist(ldb * nrhs)) )
ABORT("Malloc fails for b1[]");
for (j = 0; j < nrhs; ++j)
for (i = 0; i < ldb; ++i) b1[i+j*ldb] = b[i+j*ldb];
if ( !(berr = doubleMalloc_dist(nrhs)) )
ABORT("Malloc fails for berr[].");
m = A.nrow;
n = A.ncol;
/* Save a copy of the matrix A. */
Astore = (NRformat_loc *) A.Store;
nnz_loc = Astore->nnz_loc;
m_loc = Astore->m_loc;
fst_row = Astore->fst_row;
nzval = Astore->nzval;
colind = Astore->colind;
rowptr = Astore->rowptr;
nzval1 = doubleMalloc_dist(nnz_loc);
colind1 = intMalloc_dist(nnz_loc);
rowptr1 = intMalloc_dist(m_loc+1);
for (i = 0; i < nnz_loc; ++i) {
nzval1[i] = nzval[i];
colind1[i] = colind[i];
}
for (i = 0; i < m_loc+1; ++i) rowptr1[i] = rowptr[i];
/* ------------------------------------------------------------
WE SOLVE THE LINEAR SYSTEM FOR THE FIRST TIME.
------------------------------------------------------------*/
/* Set the default input options:
options.Fact = DOFACT;
options.Equil = YES;
options.ColPerm = METIS_AT_PLUS_A;
options.RowPerm = LargeDiag;
options.ReplaceTinyPivot = YES;
options.Trans = NOTRANS;
options.IterRefine = DOUBLE;
options.SolveInitialized = NO;
options.RefineInitialized = NO;
options.PrintStat = YES;
*/
set_default_options_dist(&options);
if (!iam) {
print_sp_ienv_dist(&options);
print_options_dist(&options);
}
/* Initialize ScalePermstruct and LUstruct. */
ScalePermstructInit(m, n, &ScalePermstruct);
LUstructInit(n, &LUstruct);
/* Initialize the statistics variables. */
PStatInit(&stat);
/* Call the linear equation solver: factorize and solve. */
pdgssvx(&options, &A, &ScalePermstruct, b, ldb, nrhs, &grid,
&LUstruct, &SOLVEstruct, berr, &stat, &info);
/* Check the accuracy of the solution. */
pdinf_norm_error(iam, m_loc, nrhs, b, ldb, xtrue, ldx, &grid);
PStatPrint(&options, &stat, &grid); /* Print the statistics. */
PStatFree(&stat);
Destroy_CompRowLoc_Matrix_dist(&A); /* Deallocate storage of matrix A. */
SUPERLU_FREE(b); /* Free storage of right-hand side. */
/* ------------------------------------------------------------
NOW WE SOLVE ANOTHER LINEAR SYSTEM.
THE MATRIX A HAS THE SAME SPARSITY PATTERN AND THE SIMILAR
NUMERICAL VALUES AS THAT IN A PREVIOUS SYSTEM.
------------------------------------------------------------*/
options.Fact = SamePattern_SameRowPerm;
PStatInit(&stat); /* Initialize the statistics variables. */
/* Set up the local A in NR_loc format */
dCreate_CompRowLoc_Matrix_dist(&A, m, n, nnz_loc, m_loc, fst_row,
nzval1, colind1, rowptr1,
SLU_NR_loc, SLU_D, SLU_GE);
/* Solve the linear system. */
pdgssvx(&options, &A, &ScalePermstruct, b1, ldb, nrhs, &grid,
&LUstruct, &SOLVEstruct, berr, &stat, &info);
/* Check the accuracy of the solution. */
if ( !iam )
printf("Solve a system with the same pattern and similar values.\n");
pdinf_norm_error(iam, m_loc, nrhs, b1, ldb, xtrue, ldx, &grid);
/* Print the statistics. */
PStatPrint(&options, &stat, &grid);
/* ------------------------------------------------------------
DEALLOCATE STORAGE.
------------------------------------------------------------*/
PStatFree(&stat);
Destroy_CompRowLoc_Matrix_dist(&A); /* Deallocate storage of matrix A. */
Destroy_LU(n, &grid, &LUstruct); /* Deallocate storage associated with
the L and U matrices. */
ScalePermstructFree(&ScalePermstruct);
LUstructFree(&LUstruct); /* Deallocate the structure of L and U.*/
if ( options.SolveInitialized ) {
dSolveFinalize(&options, &SOLVEstruct);
}
SUPERLU_FREE(b1); /* Free storage of right-hand side. */
SUPERLU_FREE(xtrue); /* Free storage of the exact solution. */
SUPERLU_FREE(berr);
/* ------------------------------------------------------------
RELEASE THE SUPERLU PROCESS GRID.
------------------------------------------------------------*/
out:
superlu_gridexit(&grid);
/* ------------------------------------------------------------
TERMINATES THE MPI EXECUTION ENVIRONMENT.
------------------------------------------------------------*/
MPI_Finalize();
#if ( DEBUGlevel>=1 )
CHECK_MALLOC(iam, "Exit main()");
#endif
}
void f_superlu_gridinit(int *Bcomm, int_t *nprow, int_t *npcol, fptr *grid)
{
superlu_gridinit(f2c_comm(Bcomm), *nprow, *npcol, (gridinfo_t *) *grid);
}
int main(int argc, char *argv[])
{
superlu_dist_options_t options;
SuperLUStat_t stat;
SuperMatrix A;
ScalePermstruct_t ScalePermstruct;
LUstruct_t LUstruct;
gridinfo_t grid;
double *berr;
doublecomplex *a, *b, *xtrue;
int_t *asub, *xa;
int_t m, n, nnz;
int_t nprow, npcol;
int iam, info, ldb, ldx, nrhs;
char trans[1];
char **cpp, c;
FILE *fp, *fopen();
extern int cpp_defs();
/* prototypes */
extern void LUstructInit(const int_t, LUstruct_t *);
extern void LUstructFree(LUstruct_t *);
extern void Destroy_LU(int_t, gridinfo_t *, LUstruct_t *);
nprow = 1; /* Default process rows. */
npcol = 1; /* Default process columns. */
nrhs = 1; /* Number of right-hand side. */
/* ------------------------------------------------------------
INITIALIZE MPI ENVIRONMENT.
------------------------------------------------------------*/
MPI_Init( &argc, &argv );
/* Parse command line argv[]. */
for (cpp = argv+1; *cpp; ++cpp) {
if ( **cpp == '-' ) {
c = *(*cpp+1);
++cpp;
switch (c) {
case 'h':
printf("Options:\n");
printf("\t-r <int>: process rows (default " IFMT ")\n", nprow);
printf("\t-c <int>: process columns (default " IFMT ")\n", npcol);
exit(0);
break;
case 'r': nprow = atoi(*cpp);
break;
case 'c': npcol = atoi(*cpp);
break;
}
} else { /* Last arg is considered a filename */
if ( !(fp = fopen(*cpp, "r")) ) {
ABORT("File does not exist");
}
break;
}
}
/* ------------------------------------------------------------
INITIALIZE THE SUPERLU PROCESS GRID.
------------------------------------------------------------*/
superlu_gridinit(MPI_COMM_WORLD, nprow, npcol, &grid);
/* Bail out if I do not belong in the grid. */
iam = grid.iam;
if ( iam >= nprow * npcol )
goto out;
#if ( DEBUGlevel>=1 )
CHECK_MALLOC(iam, "Enter main()");
#endif
/* ------------------------------------------------------------
PROCESS 0 READS THE MATRIX A, AND THEN BROADCASTS IT TO ALL
THE OTHER PROCESSES.
------------------------------------------------------------*/
if ( !iam ) {
/* Print the CPP definitions. */
cpp_defs();
/* Read the matrix stored on disk in Harwell-Boeing format. */
zreadhb_dist(iam, fp, &m, &n, &nnz, &a, &asub, &xa);
printf("Input matrix file: %s\n", *cpp);
printf("\tDimension\t" IFMT "x" IFMT "\t # nonzeros " IFMT "\n", m, n, nnz);
printf("\tProcess grid\t%d X %d\n", (int) grid.nprow, (int) grid.npcol);
/* Broadcast matrix A to the other PEs. */
MPI_Bcast( &m, 1, mpi_int_t, 0, grid.comm );
MPI_Bcast( &n, 1, mpi_int_t, 0, grid.comm );
MPI_Bcast( &nnz, 1, mpi_int_t, 0, grid.comm );
MPI_Bcast( a, nnz, SuperLU_MPI_DOUBLE_COMPLEX, 0, grid.comm );
MPI_Bcast( asub, nnz, mpi_int_t, 0, grid.comm );
MPI_Bcast( xa, n+1, mpi_int_t, 0, grid.comm );
} else {
/* Receive matrix A from PE 0. */
MPI_Bcast( &m, 1, mpi_int_t, 0, grid.comm );
MPI_Bcast( &n, 1, mpi_int_t, 0, grid.comm );
MPI_Bcast( &nnz, 1, mpi_int_t, 0, grid.comm );
/* Allocate storage for compressed column representation. */
zallocateA_dist(n, nnz, &a, &asub, &xa);
MPI_Bcast( a, nnz, SuperLU_MPI_DOUBLE_COMPLEX, 0, grid.comm );
MPI_Bcast( asub, nnz, mpi_int_t, 0, grid.comm );
MPI_Bcast( xa, n+1, mpi_int_t, 0, grid.comm );
}
/* Create compressed column matrix for A. */
zCreate_CompCol_Matrix_dist(&A, m, n, nnz, a, asub, xa,
SLU_NC, SLU_Z, SLU_GE);
/* Generate the exact solution and compute the right-hand side. */
if (!(b=doublecomplexMalloc_dist(m*nrhs))) ABORT("Malloc fails for b[]");
if (!(xtrue=doublecomplexMalloc_dist(n*nrhs))) ABORT("Malloc fails for xtrue[]");
*trans = 'N';
ldx = n;
ldb = m;
zGenXtrue_dist(n, nrhs, xtrue, ldx);
zFillRHS_dist(trans, nrhs, xtrue, ldx, &A, b, ldb);
if ( !(berr = doubleMalloc_dist(nrhs)) )
ABORT("Malloc fails for berr[].");
/* ------------------------------------------------------------
NOW WE SOLVE THE LINEAR SYSTEM.
------------------------------------------------------------*/
/* Set the default input options:
options.Fact = DOFACT;
options.Equil = YES;
options.ColPerm = METIS_AT_PLUS_A;
options.RowPerm = LargeDiag_MC64;
options.ReplaceTinyPivot = YES;
options.Trans = NOTRANS;
options.IterRefine = DOUBLE;
options.SolveInitialized = NO;
options.RefineInitialized = NO;
options.PrintStat = YES;
*/
set_default_options_dist(&options);
if (!iam) {
print_sp_ienv_dist(&options);
print_options_dist(&options);
}
/* Initialize ScalePermstruct and LUstruct. */
ScalePermstructInit(m, n, &ScalePermstruct);
LUstructInit(n, &LUstruct);
/* Initialize the statistics variables. */
PStatInit(&stat);
/* Call the linear equation solver. */
pzgssvx_ABglobal(&options, &A, &ScalePermstruct, b, ldb, nrhs, &grid,
&LUstruct, berr, &stat, &info);
/* Check the accuracy of the solution. */
if ( !iam ) {
zinf_norm_error_dist(n, nrhs, b, ldb, xtrue, ldx, &grid);
}
PStatPrint(&options, &stat, &grid); /* Print the statistics. */
/* ------------------------------------------------------------
DEALLOCATE STORAGE.
------------------------------------------------------------*/
PStatFree(&stat);
Destroy_CompCol_Matrix_dist(&A);
Destroy_LU(n, &grid, &LUstruct);
ScalePermstructFree(&ScalePermstruct);
LUstructFree(&LUstruct);
SUPERLU_FREE(b);
SUPERLU_FREE(xtrue);
SUPERLU_FREE(berr);
/* ------------------------------------------------------------
RELEASE THE SUPERLU PROCESS GRID.
------------------------------------------------------------*/
out:
superlu_gridexit(&grid);
/* ------------------------------------------------------------
TERMINATES THE MPI EXECUTION ENVIRONMENT.
------------------------------------------------------------*/
MPI_Finalize();
#if ( DEBUGlevel>=1 )
CHECK_MALLOC(iam, "Exit main()");
#endif
}
int main(int argc, char *argv[])
{
superlu_dist_options_t options;
SuperLUStat_t stat;
SuperMatrix A;
ScalePermstruct_t ScalePermstruct;
LUstruct_t LUstruct;
gridinfo_t grid;
double *berr;
double *a, *a1, *b, *b1, *xtrue;
int_t *asub, *asub1, *xa, *xa1;
int_t i, j, m, n, nnz;
int_t nprow, npcol;
int iam, info, ldb, ldx, nrhs;
char trans[1];
char **cpp, c;
FILE *fp, *fopen();
extern int cpp_defs();
/* prototypes */
extern void LUstructInit(const int_t, LUstruct_t *);
extern void LUstructFree(LUstruct_t *);
extern void Destroy_LU(int_t, gridinfo_t *, LUstruct_t *);
nprow = 1; /* Default process rows. */
npcol = 1; /* Default process columns. */
nrhs = 1; /* Number of right-hand side. */
/* ------------------------------------------------------------
INITIALIZE MPI ENVIRONMENT.
------------------------------------------------------------*/
MPI_Init( &argc, &argv );
/* Parse command line argv[]. */
for (cpp = argv+1; *cpp; ++cpp) {
if ( **cpp == '-' ) {
c = *(*cpp+1);
++cpp;
switch (c) {
case 'h':
printf("Options:\n");
printf("\t-r <int>: process rows (default %d)\n", nprow);
printf("\t-c <int>: process columns (default %d)\n", npcol);
exit(0);
break;
case 'r': nprow = atoi(*cpp);
break;
case 'c': npcol = atoi(*cpp);
break;
}
} else { /* Last arg is considered a filename */
if ( !(fp = fopen(*cpp, "r")) ) {
ABORT("File does not exist");
}
break;
}
}
/* ------------------------------------------------------------
INITIALIZE THE SUPERLU PROCESS GRID.
------------------------------------------------------------*/
superlu_gridinit(MPI_COMM_WORLD, nprow, npcol, &grid);
/* Bail out if I do not belong in the grid. */
iam = grid.iam;
if ( iam >= nprow * npcol )
goto out;
#if ( DEBUGlevel>=1 )
CHECK_MALLOC(iam, "Enter main()");
#endif
/* ------------------------------------------------------------
Process 0 reads the matrix A, and then broadcasts it to all
the other processes.
------------------------------------------------------------*/
if ( !iam ) {
/* Print the CPP definitions. */
cpp_defs();
/* Read the matrix stored on disk in Harwell-Boeing format. */
dreadhb_dist(iam, fp, &m, &n, &nnz, &a, &asub, &xa);
printf("Input matrix file: %s\n", *cpp);
printf("\tDimension\t%dx%d\t # nonzeros %d\n", m, n, nnz);
printf("\tProcess grid\t%d X %d\n", (int) grid.nprow, (int) grid.npcol);
/* Broadcast matrix A to the other PEs. */
MPI_Bcast( &m, 1, mpi_int_t, 0, grid.comm );
MPI_Bcast( &n, 1, mpi_int_t, 0, grid.comm );
MPI_Bcast( &nnz, 1, mpi_int_t, 0, grid.comm );
MPI_Bcast( a, nnz, MPI_DOUBLE, 0, grid.comm );
MPI_Bcast( asub, nnz, mpi_int_t, 0, grid.comm );
MPI_Bcast( xa, n+1, mpi_int_t, 0, grid.comm );
} else {
/* Receive matrix A from PE 0. */
MPI_Bcast( &m, 1, mpi_int_t, 0, grid.comm );
MPI_Bcast( &n, 1, mpi_int_t, 0, grid.comm );
MPI_Bcast( &nnz, 1, mpi_int_t, 0, grid.comm );
/* Allocate storage for compressed column representation. */
dallocateA_dist(n, nnz, &a, &asub, &xa);
MPI_Bcast( a, nnz, MPI_DOUBLE, 0, grid.comm );
MPI_Bcast( asub, nnz, mpi_int_t, 0, grid.comm );
MPI_Bcast( xa, n+1, mpi_int_t, 0, grid.comm );
}
/* Create compressed column matrix for A. */
dCreate_CompCol_Matrix_dist(&A, m, n, nnz, a, asub, xa,
SLU_NC, SLU_D, SLU_GE);
/* Generate the exact solution and compute the right-hand side. */
if (!(b=doubleMalloc_dist(m * nrhs))) ABORT("Malloc fails for b[]");
if (!(xtrue=doubleMalloc_dist(n*nrhs))) ABORT("Malloc fails for xtrue[]");
*trans = 'N';
ldx = n;
ldb = m;
dGenXtrue_dist(n, nrhs, xtrue, ldx);
dFillRHS_dist(trans, nrhs, xtrue, ldx, &A, b, ldb);
/* Save a copy of the right-hand side. */
if ( !(b1 = doubleMalloc_dist(m * nrhs)) ) ABORT("Malloc fails for b1[]");
for (j = 0; j < nrhs; ++j)
for (i = 0; i < m; ++i) b1[i+j*ldb] = b[i+j*ldb];
if ( !(berr = doubleMalloc_dist(nrhs)) )
ABORT("Malloc fails for berr[].");
/* Save a copy of the matrix A. */
dallocateA_dist(n, nnz, &a1, &asub1, &xa1);
for (i = 0; i < nnz; ++i) { a1[i] = a[i]; asub1[i] = asub[i]; }
for (i = 0; i < n+1; ++i) xa1[i] = xa[i];
/* ------------------------------------------------------------
WE SOLVE THE LINEAR SYSTEM FOR THE FIRST TIME.
------------------------------------------------------------*/
/* Set the default input options:
options.Fact = DOFACT;
options.Equil = YES;
options.ColPerm = METIS_AT_PLUS_A;
options.RowPerm = LargeDiag;
options.ReplaceTinyPivot = YES;
options.Trans = NOTRANS;
options.IterRefine = DOUBLE;
options.SolveInitialized = NO;
options.RefineInitialized = NO;
options.PrintStat = YES;
*/
set_default_options_dist(&options);
if (!iam) {
print_sp_ienv_dist(&options);
print_options_dist(&options);
}
/* Initialize ScalePermstruct and LUstruct. */
ScalePermstructInit(m, n, &ScalePermstruct);
LUstructInit(n, &LUstruct);
/* Initialize the statistics variables. */
PStatInit(&stat);
/* Call the linear equation solver: factorize and solve. */
pdgssvx_ABglobal(&options, &A, &ScalePermstruct, b, ldb, nrhs, &grid,
&LUstruct, berr, &stat, &info);
/* Check the accuracy of the solution. */
if ( !iam ) {
dinf_norm_error_dist(n, nrhs, b, ldb, xtrue, ldx, &grid);
}
PStatPrint(&options, &stat, &grid); /* Print the statistics. */
PStatFree(&stat);
Destroy_CompCol_Matrix_dist(&A); /* Deallocate storage of matrix A. */
Destroy_LU(n, &grid, &LUstruct); /* Deallocate storage associated with
the L and U matrices. */
SUPERLU_FREE(b); /* Free storage of right-hand side. */
/* ------------------------------------------------------------
NOW WE SOLVE ANOTHER LINEAR SYSTEM.
ONLY THE SPARSITY PATTERN OF MATRIX A IS THE SAME.
------------------------------------------------------------*/
options.Fact = SamePattern;
PStatInit(&stat); /* Initialize the statistics variables. */
/* Create compressed column matrix for A. */
dCreate_CompCol_Matrix_dist(&A, m, n, nnz, a1, asub1, xa1,
SLU_NC, SLU_D, SLU_GE);
/* Solve the linear system. */
pdgssvx_ABglobal(&options, &A, &ScalePermstruct, b1, ldb, nrhs, &grid,
&LUstruct, berr, &stat, &info);
/* Check the accuracy of the solution. */
if ( !iam ) {
printf("Solve the system with the same sparsity pattern.\n");
dinf_norm_error_dist(n, nrhs, b1, ldb, xtrue, ldx, &grid);
}
/* Print the statistics. */
PStatPrint(&options, &stat, &grid);
/* ------------------------------------------------------------
DEALLOCATE STORAGE.
------------------------------------------------------------*/
PStatFree(&stat);
Destroy_CompCol_Matrix_dist(&A); /* Deallocate storage of matrix A. */
Destroy_LU(n, &grid, &LUstruct); /* Deallocate storage associated with
the L and U matrices. */
ScalePermstructFree(&ScalePermstruct);
LUstructFree(&LUstruct); /* Deallocate the structure of L and U.*/
SUPERLU_FREE(b1); /* Free storage of right-hand side. */
SUPERLU_FREE(xtrue); /* Free storage of the exact solution. */
SUPERLU_FREE(berr);
/* ------------------------------------------------------------
RELEASE THE SUPERLU PROCESS GRID.
------------------------------------------------------------*/
out:
superlu_gridexit(&grid);
/* ------------------------------------------------------------
TERMINATES THE MPI EXECUTION ENVIRONMENT.
------------------------------------------------------------*/
MPI_Finalize();
#if ( DEBUGlevel>=1 )
CHECK_MALLOC(iam, "Exit main()");
#endif
}
/*! \brief
*
* <pre>
* Purpose
* =======
*
* The driver program PDDRIVE1.
*
* This example illustrates how to use PDGSSVX to
* solve systems with the same A but different right-hand side.
* In this case, we factorize A only once in the first call to
* PDGSSVX, and reuse the following data structures
* in the subsequent call to PDGSSVX:
* ScalePermstruct : DiagScale, R, C, perm_r, perm_c
* LUstruct : Glu_persist, Llu
*
* With MPICH, program may be run by typing:
* mpiexec -n <np> pddrive1 -r <proc rows> -c <proc columns> big.rua
* </pre>
*/
int main(int argc, char *argv[])
{
superlu_dist_options_t options;
SuperLUStat_t stat;
SuperMatrix A;
ScalePermstruct_t ScalePermstruct;
LUstruct_t LUstruct;
SOLVEstruct_t SOLVEstruct;
gridinfo_t grid;
double *berr;
double *b, *xtrue, *b1;
int i, j, m, n;
int nprow, npcol;
int iam, info, ldb, ldx, nrhs;
char **cpp, c, *postfix;
int ii, omp_mpi_level;
FILE *fp, *fopen();
int cpp_defs();
nprow = 1; /* Default process rows. */
npcol = 1; /* Default process columns. */
nrhs = 1; /* Number of right-hand side. */
/* ------------------------------------------------------------
INITIALIZE MPI ENVIRONMENT.
------------------------------------------------------------*/
MPI_Init_thread( &argc, &argv, MPI_THREAD_MULTIPLE, &omp_mpi_level);
/* Parse command line argv[]. */
for (cpp = argv+1; *cpp; ++cpp) {
if ( **cpp == '-' ) {
c = *(*cpp+1);
++cpp;
switch (c) {
case 'h':
printf("Options:\n");
printf("\t-r <int>: process rows (default %d)\n", nprow);
printf("\t-c <int>: process columns (default %d)\n", npcol);
exit(0);
break;
case 'r': nprow = atoi(*cpp);
break;
case 'c': npcol = atoi(*cpp);
break;
}
} else { /* Last arg is considered a filename */
if ( !(fp = fopen(*cpp, "r")) ) {
ABORT("File does not exist");
}
break;
}
}
/* ------------------------------------------------------------
INITIALIZE THE SUPERLU PROCESS GRID.
------------------------------------------------------------*/
superlu_gridinit(MPI_COMM_WORLD, nprow, npcol, &grid);
/* Bail out if I do not belong in the grid. */
iam = grid.iam;
if ( iam >= nprow * npcol ) goto out;
if ( !iam ) {
int v_major, v_minor, v_bugfix;
#ifdef __INTEL_COMPILER
printf("__INTEL_COMPILER is defined\n");
#endif
printf("__STDC_VERSION__ %ld\n", __STDC_VERSION__);
superlu_dist_GetVersionNumber(&v_major, &v_minor, &v_bugfix);
printf("Library version:\t%d.%d.%d\n", v_major, v_minor, v_bugfix);
printf("Input matrix file:\t%s\n", *cpp);
printf("Process grid:\t\t%d X %d\n", (int)grid.nprow, (int)grid.npcol);
fflush(stdout);
}
#if ( VAMPIR>=1 )
VT_traceoff();
#endif
#if ( DEBUGlevel>=1 )
CHECK_MALLOC(iam, "Enter main()");
#endif
for(ii = 0;ii<strlen(*cpp);ii++){
if((*cpp)[ii]=='.'){
postfix = &((*cpp)[ii+1]);
}
}
// printf("%s\n", postfix);
/* ------------------------------------------------------------
GET THE MATRIX FROM FILE AND SETUP THE RIGHT HAND SIDE.
------------------------------------------------------------*/
dcreate_matrix_postfix(&A, nrhs, &b, &ldb, &xtrue, &ldx, fp, postfix, &grid);
if ( !(b1 = doubleMalloc_dist(ldb * nrhs)) )
ABORT("Malloc fails for b1[]");
for (j = 0; j < nrhs; ++j)
for (i = 0; i < ldb; ++i) b1[i+j*ldb] = b[i+j*ldb];
if ( !(berr = doubleMalloc_dist(nrhs)) )
ABORT("Malloc fails for berr[].");
/* ------------------------------------------------------------
WE SOLVE THE LINEAR SYSTEM FOR THE FIRST TIME.
------------------------------------------------------------*/
/* Set the default input options:
options.Fact = DOFACT;
options.Equil = YES;
options.ColPerm = METIS_AT_PLUS_A;
options.RowPerm = LargeDiag_MC64;
options.ReplaceTinyPivot = NO;
options.Trans = NOTRANS;
options.IterRefine = DOUBLE;
options.SolveInitialized = NO;
options.RefineInitialized = NO;
options.PrintStat = YES;
*/
set_default_options_dist(&options);
if (!iam) {
print_sp_ienv_dist(&options);
print_options_dist(&options);
fflush(stdout);
}
m = A.nrow;
n = A.ncol;
/* Initialize ScalePermstruct and LUstruct. */
ScalePermstructInit(m, n, &ScalePermstruct);
LUstructInit(n, &LUstruct);
/* Initialize the statistics variables. */
PStatInit(&stat);
/* Call the linear equation solver. */
pdgssvx(&options, &A, &ScalePermstruct, b, ldb, nrhs, &grid,
&LUstruct, &SOLVEstruct, berr, &stat, &info);
/* Check the accuracy of the solution. */
if ( !iam ) printf("\tSolve the first system:\n");
pdinf_norm_error(iam, ((NRformat_loc *)A.Store)->m_loc,
nrhs, b, ldb, xtrue, ldx, &grid);
PStatPrint(&options, &stat, &grid); /* Print the statistics. */
PStatFree(&stat);
/* ------------------------------------------------------------
NOW WE SOLVE ANOTHER SYSTEM WITH THE SAME A BUT DIFFERENT
RIGHT-HAND SIDE, WE WILL USE THE EXISTING L AND U FACTORS IN
LUSTRUCT OBTAINED FROM A PREVIOUS FATORIZATION.
------------------------------------------------------------*/
options.Fact = FACTORED; /* Indicate the factored form of A is supplied. */
PStatInit(&stat); /* Initialize the statistics variables. */
pdgssvx(&options, &A, &ScalePermstruct, b1, ldb, nrhs, &grid,
&LUstruct, &SOLVEstruct, berr, &stat, &info);
/* Check the accuracy of the solution. */
if ( !iam ) printf("\tSolve the system with a different B:\n");
pdinf_norm_error(iam, ((NRformat_loc *)A.Store)->m_loc,
nrhs, b1, ldb, xtrue, ldx, &grid);
PStatPrint(&options, &stat, &grid); /* Print the statistics. */
/* ------------------------------------------------------------
DEALLOCATE STORAGE.
------------------------------------------------------------*/
PStatFree(&stat);
Destroy_CompRowLoc_Matrix_dist(&A);
ScalePermstructFree(&ScalePermstruct);
Destroy_LU(n, &grid, &LUstruct);
LUstructFree(&LUstruct);
if ( options.SolveInitialized ) {
dSolveFinalize(&options, &SOLVEstruct);
}
SUPERLU_FREE(b);
SUPERLU_FREE(b1);
SUPERLU_FREE(xtrue);
SUPERLU_FREE(berr);
/* ------------------------------------------------------------
RELEASE THE SUPERLU PROCESS GRID.
------------------------------------------------------------*/
out:
superlu_gridexit(&grid);
/* ------------------------------------------------------------
TERMINATES THE MPI EXECUTION ENVIRONMENT.
------------------------------------------------------------*/
MPI_Finalize();
#if ( DEBUGlevel>=1 )
CHECK_MALLOC(iam, "Exit main()");
#endif
}
int main(int argc, char *argv[])
{
superlu_options_t options;
SuperLUStat_t stat;
SuperMatrix A;
ScalePermstruct_t ScalePermstruct;
LUstruct_t LUstruct;
SOLVEstruct_t SOLVEstruct;
gridinfo_t grid;
double *berr;
doublecomplex *b, *xtrue;
int_t m, n;
int_t nprow, npcol;
int iam, info, ldb, ldx, nrhs;
char **cpp, c;
FILE *fp, *fopen();
extern int cpp_defs();
nprow = 1; /* Default process rows. */
npcol = 1; /* Default process columns. */
nrhs = 1; /* Number of right-hand side. */
/* ------------------------------------------------------------
INITIALIZE MPI ENVIRONMENT.
------------------------------------------------------------*/
MPI_Init( &argc, &argv );
/* Parse command line argv[]. */
for (cpp = argv+1; *cpp; ++cpp) {
if ( **cpp == '-' ) {
c = *(*cpp+1);
++cpp;
switch (c) {
case 'h':
printf("Options:\n");
printf("\t-r <int>: process rows (default %d)\n", nprow);
printf("\t-c <int>: process columns (default %d)\n", npcol);
exit(0);
break;
case 'r': nprow = atoi(*cpp);
break;
case 'c': npcol = atoi(*cpp);
break;
}
} else { /* Last arg is considered a filename */
if ( !(fp = fopen(*cpp, "r")) ) {
ABORT("File does not exist");
}
break;
}
}
/* ------------------------------------------------------------
INITIALIZE THE SUPERLU PROCESS GRID.
------------------------------------------------------------*/
superlu_gridinit(MPI_COMM_WORLD, nprow, npcol, &grid);
/* Bail out if I do not belong in the grid. */
iam = grid.iam;
if ( iam >= nprow * npcol ) goto out;
if ( !iam ) printf("\tProcess grid\t%d X %d\n", grid.nprow, grid.npcol);
#if ( VAMPIR>=1 )
VT_traceoff();
#endif
#if ( DEBUGlevel>=1 )
CHECK_MALLOC(iam, "Enter main()");
#endif
/* ------------------------------------------------------------
GET THE MATRIX FROM FILE AND SETUP THE RIGHT HAND SIDE.
------------------------------------------------------------*/
zcreate_matrix(&A, nrhs, &b, &ldb, &xtrue, &ldx, fp, &grid);
if ( !(berr = doubleMalloc_dist(nrhs)) )
ABORT("Malloc fails for berr[].");
/* ------------------------------------------------------------
NOW WE SOLVE THE LINEAR SYSTEM.
------------------------------------------------------------*/
/* Set the default input options:
options.Fact = DOFACT;
options.Equil = YES;
options.ParSymbFact = NO;
options.ColPerm = MMD_AT_PLUS_A;
options.RowPerm = LargeDiag;
options.ReplaceTinyPivot = YES;
options.IterRefine = DOUBLE;
options.Trans = NOTRANS;
options.SolveInitialized = NO;
options.RefineInitialized = NO;
options.PrintStat = YES;
*/
set_default_options_dist(&options);
#if 0
options.RowPerm = NOROWPERM;
options.IterRefine = NOREFINE;
options.ColPerm = NATURAL;
options.Equil = NO;
options.ReplaceTinyPivot = NO;
#endif
m = A.nrow;
n = A.ncol;
/* Initialize ScalePermstruct and LUstruct. */
ScalePermstructInit(m, n, &ScalePermstruct);
LUstructInit(m, n, &LUstruct);
/* Initialize the statistics variables. */
PStatInit(&stat);
/* Call the linear equation solver. */
pzgssvx(&options, &A, &ScalePermstruct, b, ldb, nrhs, &grid,
&LUstruct, &SOLVEstruct, berr, &stat, &info);
/* Check the accuracy of the solution. */
pzinf_norm_error(iam, ((NRformat_loc *)A.Store)->m_loc,
nrhs, b, ldb, xtrue, ldx, &grid);
PStatPrint(&options, &stat, &grid); /* Print the statistics. */
/* ------------------------------------------------------------
DEALLOCATE STORAGE.
------------------------------------------------------------*/
PStatFree(&stat);
Destroy_CompRowLoc_Matrix_dist(&A);
ScalePermstructFree(&ScalePermstruct);
Destroy_LU(n, &grid, &LUstruct);
LUstructFree(&LUstruct);
if ( options.SolveInitialized ) {
zSolveFinalize(&options, &SOLVEstruct);
}
SUPERLU_FREE(b);
SUPERLU_FREE(xtrue);
SUPERLU_FREE(berr);
/* ------------------------------------------------------------
RELEASE THE SUPERLU PROCESS GRID.
------------------------------------------------------------*/
out:
superlu_gridexit(&grid);
/* ------------------------------------------------------------
TERMINATES THE MPI EXECUTION ENVIRONMENT.
------------------------------------------------------------*/
MPI_Finalize();
#if ( DEBUGlevel>=1 )
CHECK_MALLOC(iam, "Exit main()");
#endif
}
int
DistributedSuperLU::setSize()
{
int n = theSOE->size;
//
// init the super lu process grid
//
if (gridInit == false) {
MPI_Comm comm_world; //
MPI_Group group_world; // group_worker;
comm_world = MPI_COMM_WORLD;
MPI_Comm_group(comm_world, &group_world);
// MPI_Group_excl(group_world, 1, 0, &group_worker); /* process 0 not member */
MPI_Comm_create(comm_world, group_world, &comm_SuperLU);
superlu_gridinit(comm_SuperLU, npRow, npCol, &grid);
// free old structures if resize already called
} else {
Destroy_LU(theSOE->size, &grid, &LUstruct);
ScalePermstructFree(&ScalePermstruct);
LUstructFree(&LUstruct);
}
//
// Initialize the statistics variables.
//
PStatInit(&stat);
//
// Create compressed column matrix for A.
//
if (n > 0) {
// create the SuperMatrix A
int nnz = theSOE->nnz;
rowA = new int[nnz];
for (int i=0; i<nnz; i++) rowA[i] = theSOE->rowA[i];
dCreate_CompCol_Matrix_dist(&A, n, n, nnz, theSOE->A,
rowA, theSOE->colStartA,
SLU_NC, SLU_D, SLU_GE);
//
// Initialize ScalePermstruct and LUstruct.
//
ScalePermstructInit(n, n, &ScalePermstruct);
LUstructInit(n, n, &LUstruct);
}
//
// set default options
//
set_default_options_dist(&options);
options.PrintStat=NO;
//
// Initialize the statistics variables.
//
PStatInit(&stat);
return 0;
}
