TEST(AgradRevMatrix, trace_gen_quad_form_mat_grad_vdd) {
    using stan::math::trace_gen_quad_form;
    using stan::math::sum;
    using stan::agrad::matrix_v;
    using stan::math::matrix_d;

    matrix_v av(4,4);
    matrix_d ad(4,4);
    matrix_d bd(4,2);
    matrix_v bv(4,2);
    matrix_d cd(2,2);
    matrix_v cv(2,2);
    AVAR res;
    AVEC vars;
    VEC grad;
    size_t i,j,pos;


    bd << 100, 10,
    0,  1,
    -3, -3,
    5,  2;
    bv << 100, 10,
    0,  1,
    -3, -3,
    5,  2;
    ad << 2.0,  3.0, 4.0,   5.0,
    6.0, 10.0, 2.0,   2.0,
    7.0,  2.0, 7.0,   1.0,
    8.0,  2.0, 1.0, 112.0;
    av << 2.0,  3.0, 4.0,   5.0,
    6.0, 10.0, 2.0,   2.0,
    7.0,  2.0, 7.0,   1.0,
    8.0,  2.0, 1.0, 112.0;
    cd.setIdentity(2,2);
    cv.setIdentity(2,2);

    matrix_d dqdc(bd.transpose()*ad.transpose()*bd);

    res = trace_gen_quad_form(cv,ad,bd);

    vars.clear();
    for (i = 0; i < 2; i++)
        for (j = 0; j < 2; j++)
            vars.push_back(cv(i,j));
    grad = cgradvec(res,vars);
    pos = 0;
    for (i = 0; i < 2; i++)
        for (j = 0; j < 2; j++, pos++)
            EXPECT_FLOAT_EQ(grad[pos], dqdc(i,j));
}
TEST(AgradRevMatrix, trace_gen_inv_quad_form_ldlt_grad_ddv) {
  using stan::math::sum;
  using stan::agrad::matrix_v;
  using stan::math::matrix_d;
  
  matrix_d ad(4,4);
  matrix_d bd(4,2);
  matrix_v bv(4,2);
  matrix_d cd(2,2);
  AVAR res;
  AVEC vars;
  VEC grad;
  size_t i,j,pos;
  
  
  bd << 100, 10,
  0,  1,
  -3, -3,
  5,  2;
  bv << 100, 10,
  0,  1,
  -3, -3,
  5,  2;
  ad << 9.0,  3.0, 3.0,   3.0, 
        3.0, 10.0, 2.0,   2.0,
        3.0,  2.0, 7.0,   1.0,
        3.0,  2.0, 1.0, 112.0;
  cd.setIdentity(2,2);

  stan::math::LDLT_factor<double,-1,-1> ldlt_ad;
  ldlt_ad.compute(ad);
  ASSERT_TRUE(ldlt_ad.success());

  matrix_d ainv(ad.inverse());
  matrix_d dqdb(ainv*bd*cd.transpose() + ainv.transpose()*bd*cd);
  
  // var-var
  res = trace_gen_inv_quad_form_ldlt(cd,ldlt_ad,bv);
  
  vars.clear();
  for (i = 0; i < 4; i++)
    for (j = 0; j < 2; j++)
      vars.push_back(bv(i,j));
  grad = cgradvec(res,vars);
  pos = 0;
  for (i = 0; i < 4; i++)
    for (j = 0; j < 2; j++, pos++)
      EXPECT_FLOAT_EQ(grad[pos], dqdb(i,j));
}
TEST(AgradRevMatrix, trace_quad_form_ldlt_mat_grad_vd) {
  using stan::math::sum;
  using stan::math::matrix_v;
  using stan::math::matrix_d;
  
  matrix_v av(4,4);
  matrix_d ad(4,4);
  matrix_d bd(4,2);
  AVAR res;
  AVEC vars;
  VEC grad;
  size_t i,j,pos;
  
  
  bd << 100, 10,
  0,  1,
  -3, -3,
  5,  2;
  
  ad << 9.0,  3.0, 3.0,   3.0, 
        3.0, 10.0, 2.0,   2.0,
        3.0,  2.0, 7.0,   1.0,
        3.0,  2.0, 1.0, 112.0;
  av << 9.0,  3.0, 3.0,   3.0, 
        3.0, 10.0, 2.0,   2.0,
        3.0,  2.0, 7.0,   1.0,
        3.0,  2.0, 1.0, 112.0;

  stan::math::LDLT_factor<stan::math::var,-1,-1> ldlt_av;
  ldlt_av.compute(av);
  ASSERT_TRUE(ldlt_av.success());
  
  matrix_d ainv(ad.inverse());
  matrix_d dqda(-ainv*bd*bd.transpose()*ainv);
  
  // var-var
  res = trace_inv_quad_form_ldlt(ldlt_av,bd);
  
  vars.clear();
  for (i = 0; i < 4; i++)
    for (j = 0; j < 4; j++)
      vars.push_back(av(i,j));
  grad = cgradvec(res,vars);
  pos = 0;
  for (i = 0; i < 4; i++)
    for (j = 0; j < 4; j++, pos++)
      EXPECT_FLOAT_EQ(grad[pos], dqda(i,j));
}
示例#4
0
TEST(AgradRevMatrix, quad_form_sym_vec_grad_vv) {
  using stan::math::quad_form_sym;
  using stan::agrad::matrix_v;
  using stan::agrad::vector_v;
  using stan::math::matrix_d;
  using stan::math::vector_d;
  
  matrix_v av(4,4);
  matrix_d ad(4,4);
  vector_d bd(4);
  vector_v bv(4);
  stan::agrad::var res;
  AVEC vars;
  VEC grad;
  size_t pos, i, j;
  
  
  bd << 100, 0, -3, 5;
  bv << 100, 0, -3, 5;
  ad << 2.0,  3.0, 4.0,   5.0, 
  3.0, 10.0, 2.0,   2.0,
  4.0,  2.0, 7.0,   1.0,
  5.0,  2.0, 1.0, 112.0;
  av << 2.0,  3.0, 4.0,   5.0, 
  3.0, 10.0, 2.0,   2.0,
  4.0,  2.0, 7.0,   1.0,
  5.0,  2.0, 1.0, 112.0;
  
  matrix_d dqda(bd*bd.transpose());
  vector_d dqdb(ad*bd + ad.transpose()*bd);
  
  // var-var
  res = quad_form_sym(av,bv);
  
  vars.clear();
  for (size_t i = 0; i < 4; i++)
    vars.push_back(bv[i]);
  for (i = 0; i < 4; i++)
    for (j = 0; j < 4; j++)
      vars.push_back(av(i,j));
  grad = cgradvec(res,vars);
  for (i = 0, pos = 0; i < 4; i++, pos++)
    EXPECT_FLOAT_EQ(grad[pos], dqdb[i]);
  for (i = 0; i < 4; i++)
    for (j = 0; j < 4; j++, pos++)
      EXPECT_FLOAT_EQ(grad[pos], dqda(i,j));
}
示例#5
0
TEST(AgradRevMatrix, quad_form_mat_grad_vd) {
  using stan::math::quad_form;
  using stan::math::sum;
  using stan::agrad::matrix_v;
  using stan::math::matrix_d;
  
  matrix_v av(4,4);
  matrix_d ad(4,4);
  matrix_d bd(4,2);
  AVAR res;
  AVEC vars;
  VEC grad;
  size_t i,j,pos;
  
  
  bd << 100, 10,
  0,  1,
  -3, -3,
  5,  2;
  ad << 2.0,  3.0, 4.0,   5.0, 
  6.0, 10.0, 2.0,   2.0,
  7.0,  2.0, 7.0,   1.0,
  8.0,  2.0, 1.0, 112.0;
  av << 2.0,  3.0, 4.0,   5.0, 
  6.0, 10.0, 2.0,   2.0,
  7.0,  2.0, 7.0,   1.0,
  8.0,  2.0, 1.0, 112.0;
  
  matrix_d dqda(bd*matrix_d::Ones(2,2)*bd.transpose());
  
  // var-var
  res = sum(quad_form(av,bd));
  
  vars.clear();
  for (i = 0; i < 4; i++)
    for (j = 0; j < 4; j++)
      vars.push_back(av(i,j));
  grad = cgradvec(res,vars);
  pos = 0;
  for (i = 0; i < 4; i++)
    for (j = 0; j < 4; j++, pos++)
      EXPECT_FLOAT_EQ(grad[pos], dqda(i,j));
}
TEST(AgradRevMatrix, trace_gen_inv_quad_form_ldlt_grad_vvv_basic) {
  using stan::math::sum;
  using stan::agrad::matrix_v;
  using stan::math::matrix_d;
  using stan::math::inverse;
  using stan::math::multiply;
  using stan::math::trace;
  using stan::math::transpose;
  
  matrix_v cv(2,2);
  matrix_v av(4,4);
  matrix_v bv(4,2);
  AVAR result, result_basic;
  double result_val, result_basic_val;
  AVEC vars;
  VEC grad, grad_basic;
  size_t i,j;
  stan::math::LDLT_factor<stan::agrad::var,-1,-1> ldlt_av;
  
  // calculate gradient using trace_gen_inv_quad_form_ldlt  
  bv << 100, 10,
          0,  1,
         -3, -3,
          5,  2;
  av << 9.0,  3.0, 3.0,   3.0, 
        3.0, 10.0, 2.0,   2.0,
        3.0,  2.0, 7.0,   1.0,
        3.0,  2.0, 1.0, 112.0;
  cv << 1, 2, 3, 4;

  ldlt_av.compute(av);
  ASSERT_TRUE(ldlt_av.success());
  result = trace_gen_inv_quad_form_ldlt(cv,ldlt_av,bv);
  
  vars.clear();
  for (i = 0; i < 2; i++)
    for (j = 0; j < 2; j++)
      vars.push_back(cv(i,j));
  for (i = 0; i < 4; i++)
    for (j = 0; j < 2; j++)
      vars.push_back(bv(i,j));
  for (i = 0; i < 4; i++)
    for (j = 0; j < 4; j++)
      vars.push_back(av(i,j));
  grad = cgradvec(result,vars);
  result_val = result.val();

  // calculate gradient using basic math
  bv << 100, 10,
          0,  1,
         -3, -3,
          5,  2;
  av << 9.0,  3.0, 3.0,   3.0, 
        3.0, 10.0, 2.0,   2.0,
        3.0,  2.0, 7.0,   1.0,
        3.0,  2.0, 1.0, 112.0;
  cv << 1, 2, 3, 4;

  matrix_v tmp = bv.transpose() * inverse(av) * bv;
  matrix_v gen_inv_quad_form = multiply(cv, tmp);
  result_basic = trace(gen_inv_quad_form);


  vars.clear();
  for (i = 0; i < 2; i++)
    for (j = 0; j < 2; j++)
      vars.push_back(cv(i,j));
  for (i = 0; i < 4; i++)
    for (j = 0; j < 2; j++)
      vars.push_back(bv(i,j));
  for (i = 0; i < 4; i++)
    for (j = 0; j < 4; j++)
      vars.push_back(av(i,j));
  grad_basic = cgradvec(result_basic,vars);
  result_basic_val = result_basic.val();
  
  // check values;
  EXPECT_FLOAT_EQ(result_basic_val, result_val);
  ASSERT_EQ(grad_basic.size(), grad.size());
  for (size_t n = 0; n < grad_basic.size(); n++) {
    EXPECT_FLOAT_EQ(grad_basic[n], grad[n]);
  }
}