//---------------------------------------------------------------------------------------
// Initialize - Config
bool CCudaForwardProjectionAlgorithm::initialize(const Config& _cfg)
{
	ASTRA_ASSERT(_cfg.self);
	ConfigStackCheck<CAlgorithm> CC("CudaForwardProjectionAlgorithm", this, _cfg);

	// Projector
	XMLNode node = _cfg.self.getSingleNode("ProjectorId");
	CCudaProjector2D* pCudaProjector = 0;
	if (node) {
		int id = boost::lexical_cast<int>(node.getContent());
		CProjector2D *projector = CProjector2DManager::getSingleton().get(id);
		pCudaProjector = dynamic_cast<CCudaProjector2D*>(projector);
		if (!pCudaProjector) {
			ASTRA_WARN("non-CUDA Projector2D passed to FP_CUDA");
		}
	}
	CC.markNodeParsed("ProjectorId");


	
	// sinogram data
	node = _cfg.self.getSingleNode("ProjectionDataId");
	ASTRA_CONFIG_CHECK(node, "FP_CUDA", "No ProjectionDataId tag specified.");
	int id = boost::lexical_cast<int>(node.getContent());
	m_pSinogram = dynamic_cast<CFloat32ProjectionData2D*>(CData2DManager::getSingleton().get(id));
	CC.markNodeParsed("ProjectionDataId");

	// volume data
	node = _cfg.self.getSingleNode("VolumeDataId");
	ASTRA_CONFIG_CHECK(node, "FP_CUDA", "No VolumeDataId tag specified.");
	id = boost::lexical_cast<int>(node.getContent());
	m_pVolume = dynamic_cast<CFloat32VolumeData2D*>(CData2DManager::getSingleton().get(id));
	CC.markNodeParsed("VolumeDataId");

	// GPU number
	m_iGPUIndex = (int)_cfg.self.getOptionNumerical("GPUindex", -1);
	m_iGPUIndex = (int)_cfg.self.getOptionNumerical("GPUIndex", m_iGPUIndex);
	CC.markOptionParsed("GPUindex");
	if (!_cfg.self.hasOption("GPUindex"))
		CC.markOptionParsed("GPUIndex");

	// Detector supersampling factor
	m_iDetectorSuperSampling = 1;
	if (pCudaProjector) {
		// New interface
		m_iDetectorSuperSampling = pCudaProjector->getDetectorSuperSampling();
	}
	// Deprecated option
	m_iDetectorSuperSampling = (int)_cfg.self.getOptionNumerical("DetectorSuperSampling", m_iDetectorSuperSampling);
	CC.markOptionParsed("DetectorSuperSampling");


	// return success
	return check();
}
//---------------------------------------------------------------------------------------
void CCudaForwardProjectionAlgorithm::initializeFromProjector()
{
	m_iDetectorSuperSampling = 1;
	m_iGPUIndex = -1;

	// Projector
	CCudaProjector2D* pCudaProjector = dynamic_cast<CCudaProjector2D*>(m_pProjector);
	if (!pCudaProjector) {
		if (m_pProjector) {
			ASTRA_WARN("non-CUDA Projector2D passed to FP_CUDA");
		}
	} else {
		m_iDetectorSuperSampling = pCudaProjector->getDetectorSuperSampling();
		m_iGPUIndex = pCudaProjector->getGPUIndex();
	}
}
//---------------------------------------------------------------------------------------
// Initialize - Config
bool CCudaReconstructionAlgorithm2D::initialize(const Config& _cfg)
{
	ASTRA_ASSERT(_cfg.self);
	ConfigStackCheck<CAlgorithm> CC("CudaReconstructionAlgorithm2D", this, _cfg);

	// if already initialized, clear first
	if (m_bIsInitialized) {
		clear();
	}

	// Projector
	XMLNode node = _cfg.self.getSingleNode("ProjectorId");
	CCudaProjector2D* pCudaProjector = 0;
	if (node) {
		int id = boost::lexical_cast<int>(node.getContent());
		CProjector2D *projector = CProjector2DManager::getSingleton().get(id);
		pCudaProjector = dynamic_cast<CCudaProjector2D*>(projector);
		if (!pCudaProjector) {
			ASTRA_WARN("non-CUDA Projector2D passed");
		}
	}
	CC.markNodeParsed("ProjectorId");


	// sinogram data
	node = _cfg.self.getSingleNode("ProjectionDataId");
	ASTRA_CONFIG_CHECK(node, "CudaSirt2", "No ProjectionDataId tag specified.");
	int id = boost::lexical_cast<int>(node.getContent());
	m_pSinogram = dynamic_cast<CFloat32ProjectionData2D*>(CData2DManager::getSingleton().get(id));
	CC.markNodeParsed("ProjectionDataId");

	// reconstruction data
	node = _cfg.self.getSingleNode("ReconstructionDataId");
	ASTRA_CONFIG_CHECK(node, "CudaSirt2", "No ReconstructionDataId tag specified.");
	id = boost::lexical_cast<int>(node.getContent());
	m_pReconstruction = dynamic_cast<CFloat32VolumeData2D*>(CData2DManager::getSingleton().get(id));
	CC.markNodeParsed("ReconstructionDataId");

	// fixed mask
	if (_cfg.self.hasOption("ReconstructionMaskId")) {
		m_bUseReconstructionMask = true;
		id = boost::lexical_cast<int>(_cfg.self.getOption("ReconstructionMaskId"));
		m_pReconstructionMask = dynamic_cast<CFloat32VolumeData2D*>(CData2DManager::getSingleton().get(id));
		ASTRA_CONFIG_CHECK(m_pReconstructionMask, "CudaReconstruction2D", "Invalid ReconstructionMaskId.");
	}
	CC.markOptionParsed("ReconstructionMaskId");
	// fixed mask
	if (_cfg.self.hasOption("SinogramMaskId")) {
		m_bUseSinogramMask = true;
		id = boost::lexical_cast<int>(_cfg.self.getOption("SinogramMaskId"));
		m_pSinogramMask = dynamic_cast<CFloat32ProjectionData2D*>(CData2DManager::getSingleton().get(id));
		ASTRA_CONFIG_CHECK(m_pSinogramMask, "CudaReconstruction2D", "Invalid SinogramMaskId.");
	}
	CC.markOptionParsed("SinogramMaskId");

	// Constraints - NEW
	if (_cfg.self.hasOption("MinConstraint")) {
		m_bUseMinConstraint = true;
		m_fMinValue = _cfg.self.getOptionNumerical("MinConstraint", 0.0f);
		CC.markOptionParsed("MinConstraint");
	} else {
		// Constraint - OLD
		m_bUseMinConstraint = _cfg.self.getOptionBool("UseMinConstraint", false);
		CC.markOptionParsed("UseMinConstraint");
		if (m_bUseMinConstraint) {
			m_fMinValue = _cfg.self.getOptionNumerical("MinConstraintValue", 0.0f);
			CC.markOptionParsed("MinConstraintValue");
		}
	}
	if (_cfg.self.hasOption("MaxConstraint")) {
		m_bUseMaxConstraint = true;
		m_fMaxValue = _cfg.self.getOptionNumerical("MaxConstraint", 255.0f);
		CC.markOptionParsed("MaxConstraint");
	} else {
		// Constraint - OLD
		m_bUseMaxConstraint = _cfg.self.getOptionBool("UseMaxConstraint", false);
		CC.markOptionParsed("UseMaxConstraint");
		if (m_bUseMaxConstraint) {
			m_fMaxValue = _cfg.self.getOptionNumerical("MaxConstraintValue", 0.0f);
			CC.markOptionParsed("MaxConstraintValue");
		}
	}

	// GPU number
	m_iGPUIndex = (int)_cfg.self.getOptionNumerical("GPUindex", -1);
	m_iGPUIndex = (int)_cfg.self.getOptionNumerical("GPUIndex", m_iGPUIndex);
	CC.markOptionParsed("GPUindex");
	if (!_cfg.self.hasOption("GPUindex"))
		CC.markOptionParsed("GPUIndex");

	// Supersampling factors
	m_iDetectorSuperSampling = 1;
	m_iPixelSuperSampling = 1;
	if (pCudaProjector) {
		// New interface
		m_iDetectorSuperSampling = pCudaProjector->getDetectorSuperSampling();
		m_iPixelSuperSampling = pCudaProjector->getVoxelSuperSampling();
	}
	// Deprecated options
	m_iDetectorSuperSampling = (int)_cfg.self.getOptionNumerical("DetectorSuperSampling", m_iDetectorSuperSampling);
	m_iPixelSuperSampling = (int)_cfg.self.getOptionNumerical("PixelSuperSampling", m_iPixelSuperSampling);
	CC.markOptionParsed("DetectorSuperSampling");
	CC.markOptionParsed("PixelSuperSampling");


	return _check();
}