void createTestFeatureMapSimVector_(FeatureMapSimVector& feature_maps)
{
feature_maps.clear();
// first feature map TVQMENQFVAFVDK,ACHKKKKHHACAC,AAAAHTKLRTTIPPEFG,RYCNHKTUIKL
FeatureMapSim fm1,fm2;
ProteinHit prothit1,prothit2,prothit3,prothit4,prothit5,prothit6;
// create first map
prothit1.setSequence("AAAAAAAKHHHHHHHHHHH");
prothit1.setMetaValue("description", "test sequence 1");
prothit1.setAccession("ACC1");
prothit1.setMetaValue("intensity", 200.0);
prothit2.setSequence("CNHAAAAAAAAA");
prothit2.setMetaValue("description", "test sequence 2");
prothit2.setAccession("ACC2");
prothit2.setMetaValue("intensity", 100.0);
prothit3.setSequence("LDCELR");
prothit3.setMetaValue("description", "test sequence 3");
prothit3.setAccession("ACC3");
prothit3.setMetaValue("intensity", 100.0);
ProteinIdentification protIdent1;
protIdent1.insertHit(prothit1);
protIdent1.insertHit(prothit2);
protIdent1.insertHit(prothit3);
vector<ProteinIdentification> protIdents_vec1;
protIdents_vec1.push_back(protIdent1);
fm1.setProteinIdentifications(protIdents_vec1);
// create labeled map
prothit4.setSequence("AAAAAAAKHHHHHHHHHHH"); // same as protein 1 from first map
prothit4.setMetaValue("description", "test sequence 4");
prothit4.setAccession("ACC4");
prothit4.setMetaValue("intensity", 50.0);
prothit5.setSequence("CNHAAAAAAAAA");
prothit5.setMetaValue("description", "test sequence 5");
prothit5.setAccession("ACC5");
prothit5.setMetaValue("intensity", 100.0);
prothit6.setSequence("CNHAADDAAAAA");
prothit6.setMetaValue("description", "test sequence 6");
prothit6.setAccession("ACC6");
prothit6.setMetaValue("intensity", 120.0);
ProteinIdentification protIdent2;
protIdent2.insertHit(prothit4);
protIdent2.insertHit(prothit5);
protIdent2.insertHit(prothit6);
vector<ProteinIdentification> protIdents_vec2;
protIdents_vec2.push_back(protIdent2);
fm2.setProteinIdentifications(protIdents_vec2);
feature_maps.push_back(fm1);
feature_maps.push_back(fm2);
}
