C++ (Cpp) IndexedMzMLFile::getNrChromatograms示例

示例#1

文件： IndexedMzMLFile_test.cpp 项目： chahuistle/OpenMS

  file.openFile(OPENMS_GET_TEST_DATA_PATH("IndexedmzMLFile_1.mzML"));
  TEST_EQUAL(file.getParsingSuccess(), true)
}
END_SECTION

START_SECTION(( size_t getNrSpectra() const ))
{
  IndexedMzMLFile file(OPENMS_GET_TEST_DATA_PATH("IndexedmzMLFile_1.mzML"));
  TEST_EQUAL(file.getNrSpectra(), 2)
}
END_SECTION

START_SECTION(( size_t getNrChromatograms() const ))
{
  IndexedMzMLFile file(OPENMS_GET_TEST_DATA_PATH("IndexedmzMLFile_1.mzML"));
  TEST_EQUAL(file.getNrChromatograms(), 1)
}
END_SECTION

START_SECTION(( OpenMS::Interfaces::SpectrumPtr getSpectrumById(int id)  ))
{
  IndexedMzMLFile file(OPENMS_GET_TEST_DATA_PATH("IndexedmzMLFile_1.mzML"));

	MSExperiment<> exp;
	MzMLFile().load(OPENMS_GET_TEST_DATA_PATH("IndexedmzMLFile_1.mzML"),exp);

  TEST_EQUAL(file.getNrSpectra(), exp.getSpectra().size())

  OpenMS::Interfaces::SpectrumPtr spec = file.getSpectrumById(0);
  TEST_EQUAL(spec->getMZArray()->data.size(), exp.getSpectra()[0].size() )
  TEST_EQUAL(spec->getIntensityArray()->data.size(), exp.getSpectra()[0].size() )

示例#2

  file.openFile(OPENMS_GET_TEST_DATA_PATH("IndexedmzMLFile_1.mzML"));
  TEST_EQUAL(file.getParsingSuccess(), true)
}
END_SECTION

START_SECTION(( bool getNrSpectra() ))
{
  IndexedMzMLFile file(OPENMS_GET_TEST_DATA_PATH("IndexedmzMLFile_1.mzML"));
  TEST_EQUAL(file.getNrSpectra(), 2)
}
END_SECTION

START_SECTION(( bool getNrChromatograms() ))
{
  IndexedMzMLFile file(OPENMS_GET_TEST_DATA_PATH("IndexedmzMLFile_1.mzML"));
  TEST_EQUAL(file.getNrChromatograms(), 1)
}
END_SECTION

START_SECTION(( OpenMS::Interfaces::SpectrumPtr getSpectrumById(int id)  ))
{
  IndexedMzMLFile file(OPENMS_GET_TEST_DATA_PATH("IndexedmzMLFile_1.mzML"));

	MSExperiment<> exp;
	MzMLFile().load(OPENMS_GET_TEST_DATA_PATH("IndexedmzMLFile_1.mzML"),exp);

  TEST_EQUAL(file.getNrSpectra(), exp.getSpectra().size())

  OpenMS::Interfaces::SpectrumPtr spec = file.getSpectrumById(0);
  TEST_EQUAL(spec->getMZArray()->data.size(), exp.getSpectra()[0].size() )
  TEST_EQUAL(spec->getIntensityArray()->data.size(), exp.getSpectra()[0].size() )