template <typename PointInT, typename PointNT, typename PointOutT> void
pcl::GFPFHEstimation<PointInT, PointNT, PointOutT>::computeFeature (PointCloudOut &output)
{
pcl::octree::OctreePointCloudSearch<PointInT> octree (octree_leaf_size_);
octree.setInputCloud (input_);
octree.addPointsFromInputCloud ();
typename pcl::PointCloud<PointInT>::VectorType occupied_cells;
octree.getOccupiedVoxelCenters (occupied_cells);
// Determine the voxels crosses along the line segments
// formed by every pair of occupied cells.
std::vector< std::vector<int> > line_histograms;
for (size_t i = 0; i < occupied_cells.size (); ++i)
{
Eigen::Vector3f origin = occupied_cells[i].getVector3fMap ();
for (size_t j = i+1; j < occupied_cells.size (); ++j)
{
typename pcl::PointCloud<PointInT>::VectorType intersected_cells;
Eigen::Vector3f end = occupied_cells[j].getVector3fMap ();
octree.getApproxIntersectedVoxelCentersBySegment (origin, end, intersected_cells, 0.5f);
// Intersected cells are ordered from closest to furthest w.r.t. the origin.
std::vector<int> histogram;
for (size_t k = 0; k < intersected_cells.size (); ++k)
{
std::vector<int> indices;
octree.voxelSearch (intersected_cells[k], indices);
int label = emptyLabel ();
if (indices.size () != 0)
{
label = getDominantLabel (indices);
}
histogram.push_back (label);
}
line_histograms.push_back(histogram);
}
}
std::vector< std::vector<int> > transition_histograms;
computeTransitionHistograms (line_histograms, transition_histograms);
std::vector<float> distances;
computeDistancesToMean (transition_histograms, distances);
std::vector<float> gfpfh_histogram;
computeDistanceHistogram (distances, gfpfh_histogram);
output.clear ();
output.width = 1;
output.height = 1;
output.points.resize (1);
std::copy (gfpfh_histogram.begin (), gfpfh_histogram.end (), output.points[0].histogram);
}
template <typename PointInT, typename PointOutT, typename NormalT> void
pcl::TrajkovicKeypoint3D<PointInT, PointOutT, NormalT>::detectKeypoints (PointCloudOut &output)
{
response_.reset (new pcl::PointCloud<float> (input_->width, input_->height));
const Normals &normals = *normals_;
const PointCloudIn &input = *input_;
pcl::PointCloud<float>& response = *response_;
const int w = static_cast<int> (input_->width) - half_window_size_;
const int h = static_cast<int> (input_->height) - half_window_size_;
if (method_ == FOUR_CORNERS)
{
#ifdef _OPENMP
#pragma omp parallel for num_threads (threads_)
#endif
for(int j = half_window_size_; j < h; ++j)
{
for(int i = half_window_size_; i < w; ++i)
{
if (!isFinite (input (i,j))) continue;
const NormalT ¢er = normals (i,j);
if (!isFinite (center)) continue;
int count = 0;
const NormalT &up = getNormalOrNull (i, j-half_window_size_, count);
const NormalT &down = getNormalOrNull (i, j+half_window_size_, count);
const NormalT &left = getNormalOrNull (i-half_window_size_, j, count);
const NormalT &right = getNormalOrNull (i+half_window_size_, j, count);
// Get rid of isolated points
if (!count) continue;
float sn1 = squaredNormalsDiff (up, center);
float sn2 = squaredNormalsDiff (down, center);
float r1 = sn1 + sn2;
float r2 = squaredNormalsDiff (right, center) + squaredNormalsDiff (left, center);
float d = std::min (r1, r2);
if (d < first_threshold_) continue;
sn1 = sqrt (sn1);
sn2 = sqrt (sn2);
float b1 = normalsDiff (right, up) * sn1;
b1+= normalsDiff (left, down) * sn2;
float b2 = normalsDiff (right, down) * sn2;
b2+= normalsDiff (left, up) * sn1;
float B = std::min (b1, b2);
float A = r2 - r1 - 2*B;
response (i,j) = ((B < 0) && ((B + A) > 0)) ? r1 - ((B*B)/A) : d;
}
}
}
else
{
#ifdef _OPENMP
#pragma omp parallel for num_threads (threads_)
#endif
for(int j = half_window_size_; j < h; ++j)
{
for(int i = half_window_size_; i < w; ++i)
{
if (!isFinite (input (i,j))) continue;
const NormalT ¢er = normals (i,j);
if (!isFinite (center)) continue;
int count = 0;
const NormalT &up = getNormalOrNull (i, j-half_window_size_, count);
const NormalT &down = getNormalOrNull (i, j+half_window_size_, count);
const NormalT &left = getNormalOrNull (i-half_window_size_, j, count);
const NormalT &right = getNormalOrNull (i+half_window_size_, j, count);
const NormalT &upleft = getNormalOrNull (i-half_window_size_, j-half_window_size_, count);
const NormalT &upright = getNormalOrNull (i+half_window_size_, j-half_window_size_, count);
const NormalT &downleft = getNormalOrNull (i-half_window_size_, j+half_window_size_, count);
const NormalT &downright = getNormalOrNull (i+half_window_size_, j+half_window_size_, count);
// Get rid of isolated points
if (!count) continue;
std::vector<float> r (4,0);
r[0] = squaredNormalsDiff (up, center);
r[0]+= squaredNormalsDiff (down, center);
r[1] = squaredNormalsDiff (upright, center);
r[1]+= squaredNormalsDiff (downleft, center);
r[2] = squaredNormalsDiff (right, center);
r[2]+= squaredNormalsDiff (left, center);
r[3] = squaredNormalsDiff (downright, center);
r[3]+= squaredNormalsDiff (upleft, center);
float d = *(std::min_element (r.begin (), r.end ()));
if (d < first_threshold_) continue;
std::vector<float> B (4,0);
std::vector<float> A (4,0);
std::vector<float> sumAB (4,0);
B[0] = normalsDiff (upright, up) * normalsDiff (up, center);
B[0]+= normalsDiff (downleft, down) * normalsDiff (down, center);
B[1] = normalsDiff (right, upright) * normalsDiff (upright, center);
B[1]+= normalsDiff (left, downleft) * normalsDiff (downleft, center);
B[2] = normalsDiff (downright, right) * normalsDiff (downright, center);
B[2]+= normalsDiff (upleft, left) * normalsDiff (upleft, center);
B[3] = normalsDiff (down, downright) * normalsDiff (downright, center);
B[3]+= normalsDiff (up, upleft) * normalsDiff (upleft, center);
A[0] = r[1] - r[0] - B[0] - B[0];
A[1] = r[2] - r[1] - B[1] - B[1];
A[2] = r[3] - r[2] - B[2] - B[2];
A[3] = r[0] - r[3] - B[3] - B[3];
sumAB[0] = A[0] + B[0];
sumAB[1] = A[1] + B[1];
sumAB[2] = A[2] + B[2];
sumAB[3] = A[3] + B[3];
if ((*std::max_element (B.begin (), B.end ()) < 0) &&
(*std::min_element (sumAB.begin (), sumAB.end ()) > 0))
{
std::vector<float> D (4,0);
D[0] = B[0] * B[0] / A[0];
D[1] = B[1] * B[1] / A[1];
D[2] = B[2] * B[2] / A[2];
D[3] = B[3] * B[3] / A[3];
response (i,j) = *(std::min (D.begin (), D.end ()));
}
else
response (i,j) = d;
}
}
}
// Non maximas suppression
std::vector<int> indices = *indices_;
std::sort (indices.begin (), indices.end (),
boost::bind (&TrajkovicKeypoint3D::greaterCornernessAtIndices, this, _1, _2));
output.clear ();
output.reserve (input_->size ());
std::vector<bool> occupency_map (indices.size (), false);
const int width (input_->width);
const int height (input_->height);
const int occupency_map_size (indices.size ());
#ifdef _OPENMP
#pragma omp parallel for shared (output) num_threads (threads_)
#endif
for (int i = 0; i < indices.size (); ++i)
{
int idx = indices[i];
if ((response_->points[idx] < second_threshold_) || occupency_map[idx])
continue;
PointOutT p;
p.getVector3fMap () = input_->points[idx].getVector3fMap ();
p.intensity = response_->points [idx];
#ifdef _OPENMP
#pragma omp critical
#endif
{
output.push_back (p);
keypoints_indices_->indices.push_back (idx);
}
const int x = idx % width;
const int y = idx / width;
const int u_end = std::min (width, x + half_window_size_);
const int v_end = std::min (height, y + half_window_size_);
for(int v = std::max (0, y - half_window_size_); v < v_end; ++v)
for(int u = std::max (0, x - half_window_size_); u < u_end; ++u)
occupency_map[v*width + u] = true;
}
output.height = 1;
output.width = static_cast<uint32_t> (output.size());
// we don not change the denseness
output.is_dense = true;
}
template <typename PointInT, typename PointOutT, typename IntensityT> void
pcl::HarrisKeypoint2D<PointInT, PointOutT, IntensityT>::detectKeypoints (PointCloudOut &output)
{
derivatives_cols_.resize (input_->width, input_->height);
derivatives_rows_.resize (input_->width, input_->height);
//Compute cloud intensities first derivatives along columns and rows
//!!! nsallem 20120220 : we don't test here for density so if one term in nan the result is nan
int w = static_cast<int> (input_->width) - 1;
int h = static_cast<int> (input_->height) - 1;
// j = 0 --> j-1 out of range ; use 0
// i = 0 --> i-1 out of range ; use 0
derivatives_cols_(0,0) = (intensity_ ((*input_) (0,1)) - intensity_ ((*input_) (0,0))) * 0.5;
derivatives_rows_(0,0) = (intensity_ ((*input_) (1,0)) - intensity_ ((*input_) (0,0))) * 0.5;
// #ifdef _OPENMP
// //#pragma omp parallel for shared (derivatives_cols_, input_) num_threads (threads_)
// #pragma omp parallel for num_threads (threads_)
// #endif
for(int i = 1; i < w; ++i)
{
derivatives_cols_(i,0) = (intensity_ ((*input_) (i,1)) - intensity_ ((*input_) (i,0))) * 0.5;
}
derivatives_rows_(w,0) = (intensity_ ((*input_) (w,0)) - intensity_ ((*input_) (w-1,0))) * 0.5;
derivatives_cols_(w,0) = (intensity_ ((*input_) (w,1)) - intensity_ ((*input_) (w,0))) * 0.5;
// #ifdef _OPENMP
// //#pragma omp parallel for shared (derivatives_cols_, derivatives_rows_, input_) num_threads (threads_)
// #pragma omp parallel for num_threads (threads_)
// #endif
for(int j = 1; j < h; ++j)
{
// i = 0 --> i-1 out of range ; use 0
derivatives_rows_(0,j) = (intensity_ ((*input_) (1,j)) - intensity_ ((*input_) (0,j))) * 0.5;
for(int i = 1; i < w; ++i)
{
// derivative with respect to rows
derivatives_rows_(i,j) = (intensity_ ((*input_) (i+1,j)) - intensity_ ((*input_) (i-1,j))) * 0.5;
// derivative with respect to cols
derivatives_cols_(i,j) = (intensity_ ((*input_) (i,j+1)) - intensity_ ((*input_) (i,j-1))) * 0.5;
}
// i = w --> w+1 out of range ; use w
derivatives_rows_(w,j) = (intensity_ ((*input_) (w,j)) - intensity_ ((*input_) (w-1,j))) * 0.5;
}
// j = h --> j+1 out of range use h
derivatives_cols_(0,h) = (intensity_ ((*input_) (0,h)) - intensity_ ((*input_) (0,h-1))) * 0.5;
derivatives_rows_(0,h) = (intensity_ ((*input_) (1,h)) - intensity_ ((*input_) (0,h))) * 0.5;
// #ifdef _OPENMP
// //#pragma omp parallel for shared (derivatives_cols_, input_) num_threads (threads_)
// #pragma omp parallel for num_threads (threads_)
// #endif
for(int i = 1; i < w; ++i)
{
derivatives_cols_(i,h) = (intensity_ ((*input_) (i,h)) - intensity_ ((*input_) (i,h-1))) * 0.5;
}
derivatives_rows_(w,h) = (intensity_ ((*input_) (w,h)) - intensity_ ((*input_) (w-1,h))) * 0.5;
derivatives_cols_(w,h) = (intensity_ ((*input_) (w,h)) - intensity_ ((*input_) (w,h-1))) * 0.5;
float highest_response_;
switch (method_)
{
case HARRIS:
responseHarris(*response_, highest_response_);
break;
case NOBLE:
responseNoble(*response_, highest_response_);
break;
case LOWE:
responseLowe(*response_, highest_response_);
break;
case TOMASI:
responseTomasi(*response_, highest_response_);
break;
}
if (!nonmax_)
output = *response_;
else
{
threshold_*= highest_response_;
std::sort (indices_->begin (), indices_->end (),
boost::bind (&HarrisKeypoint2D::greaterIntensityAtIndices, this, _1, _2));
output.clear ();
output.reserve (response_->size());
std::vector<bool> occupency_map (response_->size (), false);
int width (response_->width);
int height (response_->height);
const int occupency_map_size (occupency_map.size ());
#ifdef _OPENMP
#pragma omp parallel for shared (output, occupency_map) private (width, height) num_threads(threads_)
#endif
for (int idx = 0; idx < occupency_map_size; ++idx)
{
if (occupency_map[idx] || response_->points [indices_->at (idx)].intensity < threshold_ || !isFinite (response_->points[idx]))
continue;
#ifdef _OPENMP
#pragma omp critical
#endif
output.push_back (response_->at (indices_->at (idx)));
int u_end = std::min (width, indices_->at (idx) % width + min_distance_);
int v_end = std::min (height, indices_->at (idx) / width + min_distance_);
for(int u = std::max (0, indices_->at (idx) % width - min_distance_); u < u_end; ++u)
for(int v = std::max (0, indices_->at (idx) / width - min_distance_); v < v_end; ++v)
occupency_map[v*input_->width+u] = true;
}
// if (refine_)
// refineCorners (output);
output.height = 1;
output.width = static_cast<uint32_t> (output.size());
}
// we don not change the denseness
output.is_dense = input_->is_dense;
}
