int main(int argc, char *argv[])
{
void *cvode_mem;
UserData data;
realtype t, tout;
N_Vector y;
int iout, flag;
realtype pbar[NS];
int is;
N_Vector *yS;
booleantype sensi, err_con;
int sensi_meth;
cvode_mem = NULL;
data = NULL;
y = NULL;
yS = NULL;
/* Process arguments */
ProcessArgs(argc, argv, &sensi, &sensi_meth, &err_con);
/* User data structure */
data = (UserData) malloc(sizeof *data);
if (check_flag((void *)data, "malloc", 2)) return(1);
data->p[0] = RCONST(0.04);
data->p[1] = RCONST(1.0e4);
data->p[2] = RCONST(3.0e7);
/* Initial conditions */
y = N_VNew_Serial(NEQ);
if (check_flag((void *)y, "N_VNew_Serial", 0)) return(1);
Ith(y,1) = Y1;
Ith(y,2) = Y2;
Ith(y,3) = Y3;
/* Create CVODES object */
cvode_mem = CVodeCreate(CV_BDF, CV_NEWTON);
if (check_flag((void *)cvode_mem, "CVodeCreate", 0)) return(1);
/* Allocate space for CVODES */
flag = CVodeMalloc(cvode_mem, f, T0, y, CV_WF, 0.0, NULL);
if (check_flag(&flag, "CVodeMalloc", 1)) return(1);
/* Use private function to compute error weights */
flag = CVodeSetEwtFn(cvode_mem, ewt, NULL);
if (check_flag(&flag, "CVodeSetEwtFn", 1)) return(1);
/* Attach user data */
flag = CVodeSetFdata(cvode_mem, data);
if (check_flag(&flag, "CVodeSetFdata", 1)) return(1);
/* Attach linear solver */
flag = CVDense(cvode_mem, NEQ);
if (check_flag(&flag, "CVDense", 1)) return(1);
flag = CVDenseSetJacFn(cvode_mem, Jac, data);
if (check_flag(&flag, "CVDenseSetJacFn", 1)) return(1);
printf("\n3-species chemical kinetics problem\n");
/* Sensitivity-related settings */
if (sensi) {
pbar[0] = data->p[0];
pbar[1] = data->p[1];
pbar[2] = data->p[2];
yS = N_VNewVectorArray_Serial(NS, NEQ);
if (check_flag((void *)yS, "N_VNewVectorArray_Serial", 0)) return(1);
for (is=0;is<NS;is++) N_VConst(ZERO, yS[is]);
flag = CVodeSensMalloc(cvode_mem, NS, sensi_meth, yS);
if(check_flag(&flag, "CVodeSensMalloc", 1)) return(1);
flag = CVodeSetSensRhs1Fn(cvode_mem, fS);
if (check_flag(&flag, "CVodeSetSensRhs1Fn", 1)) return(1);
flag = CVodeSetSensErrCon(cvode_mem, err_con);
if (check_flag(&flag, "CVodeSetSensFdata", 1)) return(1);
flag = CVodeSetSensFdata(cvode_mem, data);
if (check_flag(&flag, "CVodeSetSensFdata", 1)) return(1);
flag = CVodeSetSensParams(cvode_mem, NULL, pbar, NULL);
if (check_flag(&flag, "CVodeSetSensParams", 1)) return(1);
printf("Sensitivity: YES ");
if(sensi_meth == CV_SIMULTANEOUS)
printf("( SIMULTANEOUS +");
else
if(sensi_meth == CV_STAGGERED) printf("( STAGGERED +");
else printf("( STAGGERED1 +");
if(err_con) printf(" FULL ERROR CONTROL )");
else printf(" PARTIAL ERROR CONTROL )");
} else {
printf("Sensitivity: NO ");
}
/* In loop over output points, call CVode, print results, test for error */
printf("\n\n");
printf("===================================================");
printf("============================\n");
printf(" T Q H NST y1");
printf(" y2 y3 \n");
printf("===================================================");
printf("============================\n");
for (iout=1, tout=T1; iout <= NOUT; iout++, tout *= TMULT) {
flag = CVode(cvode_mem, tout, y, &t, CV_NORMAL);
if (check_flag(&flag, "CVode", 1)) break;
PrintOutput(cvode_mem, t, y);
if (sensi) {
flag = CVodeGetSens(cvode_mem, t, yS);
if (check_flag(&flag, "CVodeGetSens", 1)) break;
PrintOutputS(yS);
}
printf("-------------------------------------------------");
printf("------------------------------\n");
}
/* Print final statistics */
PrintFinalStats(cvode_mem, sensi);
/* Free memory */
N_VDestroy_Serial(y); /* Free y vector */
if (sensi) {
N_VDestroyVectorArray_Serial(yS, NS); /* Free yS vector */
}
free(data); /* Free user data */
CVodeFree(cvode_mem); /* Free CVODES memory */
return(0);
}
int main()
{
realtype t, tout;
N_Vector y;
void *cvode_mem;
int flag, flagr, iout;
int rootsfound[2];
y = NULL;
cvode_mem = NULL;
/* Create serial vector of length NEQ for I.C. */
y = N_VNew_Serial(NEQ);
if (check_flag((void *)y, "N_VNew_Serial", 0)) return(1);
/* Initialize y */
Ith(y,1) = Y1;
Ith(y,2) = Y2;
Ith(y,3) = Y3;
/*
Call CVodeCreate to create the solver memory:
CV_BDF specifies the Backward Differentiation Formula
CV_NEWTON specifies a Newton iteration
A pointer to the integrator problem memory is returned and stored in cvode_mem.
*/
cvode_mem = CVodeCreate(CV_BDF, CV_NEWTON);
if (check_flag((void *)cvode_mem, "CVodeCreate", 0)) return(1);
/*
Call CVodeMalloc to initialize the integrator memory:
cvode_mem is the pointer to the integrator memory returned by CVodeCreate
f is the user's right hand side function in y'=f(t,y)
T0 is the initial time
y is the initial dependent variable vector
CV_WF specifies scalar relative and vector absolute tolerances
reltol not needed (pass 0.0)
abstol not needed (pass NULL)
*/
flag = CVodeMalloc(cvode_mem, f, T0, y, CV_WF, 0.0, NULL);
if (check_flag(&flag, "CVodeMalloc", 1)) return(1);
/* Use private function to compute error weights */
flag = CVodeSetEwtFn(cvode_mem, ewt, NULL);
if (check_flag(&flag, "CVodeSetEwtFn", 1)) return(1);
/* Call CVodeRootInit to specify the root function g with 2 components */
flag = CVodeRootInit(cvode_mem, 2, g, NULL);
if (check_flag(&flag, "CVodeRootInit", 1)) return(1);
/* Call CVDense to specify the CVDENSE dense linear solver */
flag = CVDense(cvode_mem, NEQ);
if (check_flag(&flag, "CVDense", 1)) return(1);
/* Set the Jacobian routine to Jac (user-supplied) */
flag = CVDenseSetJacFn(cvode_mem, Jac, NULL);
if (check_flag(&flag, "CVDenseSetJacFn", 1)) return(1);
/* In loop, call CVode, print results, and test for error.
Break out of loop when NOUT preset output times have been reached. */
printf(" \n3-species kinetics problem\n\n");
iout = 0; tout = T1;
while(1) {
flag = CVode(cvode_mem, tout, y, &t, CV_NORMAL);
PrintOutput(t, Ith(y,1), Ith(y,2), Ith(y,3));
if (flag == CV_ROOT_RETURN) {
flagr = CVodeGetRootInfo(cvode_mem, rootsfound);
check_flag(&flagr, "CVodeGetRootInfo", 1);
PrintRootInfo(rootsfound[0],rootsfound[1]);
}
if (check_flag(&flag, "CVode", 1)) break;
if (flag == CV_SUCCESS) {
iout++;
tout *= TMULT;
}
if (iout == NOUT) break;
}
/* Print some final statistics */
PrintFinalStats(cvode_mem);
/* Free y vector */
N_VDestroy_Serial(y);
/* Free integrator memory */
CVodeFree(&cvode_mem);
return(0);
}
