Beispiel #1
0
/*************************************************************************
* This function performs k-way refinement
**************************************************************************/
void Moc_KWayFM(CtrlType *ctrl, GraphType *graph, WorkSpaceType *wspace, int npasses)
{
  int h, i, ii, iii, j, k, c;
  int pass, nvtxs, nedges, ncon;
  int nmoves, nmoved, nswaps, nzgswaps;
/*  int gnswaps, gnzgswaps; */
  int me, firstvtx, lastvtx, yourlastvtx;
  int from, to = -1, oldto, oldcut, mydomain, yourdomain, imbalanced, overweight;
  int npes = ctrl->npes, mype = ctrl->mype, nparts = ctrl->nparts;
  int nlupd, nsupd, nnbrs, nchanged;
  idxtype *xadj, *ladjncy, *adjwgt, *vtxdist;
  idxtype *where, *tmp_where, *moved;
  floattype *lnpwgts, *gnpwgts, *ognpwgts, *pgnpwgts, *movewgts, *overfill;
  idxtype *update, *supdate, *rupdate, *pe_updates;
  idxtype *changed, *perm, *pperm, *htable;
  idxtype *peind, *recvptr, *sendptr;
  KeyValueType *swchanges, *rwchanges;
  RInfoType *rinfo, *myrinfo, *tmp_myrinfo, *tmp_rinfo;
  EdgeType *tmp_edegrees, *my_edegrees, *your_edegrees;
  floattype lbvec[MAXNCON], *nvwgt, *badmaxpwgt, *ubvec, *tpwgts, lbavg, ubavg;
  int *nupds_pe;

  IFSET(ctrl->dbglvl, DBG_TIME, starttimer(ctrl->KWayTmr));

  /*************************/
  /* set up common aliases */
  /*************************/
  nvtxs = graph->nvtxs;
  nedges = graph->nedges;
  ncon = graph->ncon;

  vtxdist = graph->vtxdist;
  xadj = graph->xadj;
  ladjncy = graph->adjncy;
  adjwgt = graph->adjwgt;

  firstvtx = vtxdist[mype];
  lastvtx = vtxdist[mype+1];

  where   = graph->where;
  rinfo   = graph->rinfo;
  lnpwgts = graph->lnpwgts;
  gnpwgts = graph->gnpwgts;
  ubvec   = ctrl->ubvec;
  tpwgts  = ctrl->tpwgts;

  nnbrs = graph->nnbrs;
  peind = graph->peind;
  recvptr = graph->recvptr;
  sendptr = graph->sendptr;

  changed = idxmalloc(nvtxs, "KWR: changed");
  rwchanges = wspace->pairs;
  swchanges = rwchanges + recvptr[nnbrs];

  /************************************/
  /* set up important data structures */
  /************************************/
  perm = idxmalloc(nvtxs, "KWR: perm");
  pperm = idxmalloc(nparts, "KWR: pperm");

  update = idxmalloc(nvtxs, "KWR: update");
  supdate = wspace->indices;
  rupdate = supdate + recvptr[nnbrs];
  nupds_pe = imalloc(npes, "KWR: nupds_pe");
  htable = idxsmalloc(nvtxs+graph->nrecv, 0, "KWR: lhtable");
  badmaxpwgt = fmalloc(nparts*ncon, "badmaxpwgt");

  for (i=0; i<nparts; i++) {
    for (h=0; h<ncon; h++) {
      badmaxpwgt[i*ncon+h] = ubvec[h]*tpwgts[i*ncon+h];
    }
  }

  movewgts = fmalloc(nparts*ncon, "KWR: movewgts");
  ognpwgts = fmalloc(nparts*ncon, "KWR: ognpwgts");
  pgnpwgts = fmalloc(nparts*ncon, "KWR: pgnpwgts");
  overfill = fmalloc(nparts*ncon, "KWR: overfill");
  moved = idxmalloc(nvtxs, "KWR: moved");
  tmp_where = idxmalloc(nvtxs+graph->nrecv, "KWR: tmp_where");
  tmp_rinfo = (RInfoType *)GKmalloc(sizeof(RInfoType)*nvtxs, "KWR: tmp_rinfo");
  tmp_edegrees = (EdgeType *)GKmalloc(sizeof(EdgeType)*nedges, "KWR: tmp_edegrees");

  idxcopy(nvtxs+graph->nrecv, where, tmp_where);
  for (i=0; i<nvtxs; i++) {
    tmp_rinfo[i].id = rinfo[i].id;
    tmp_rinfo[i].ed = rinfo[i].ed;
    tmp_rinfo[i].ndegrees = rinfo[i].ndegrees;
    tmp_rinfo[i].degrees = tmp_edegrees+xadj[i];

    for (j=0; j<rinfo[i].ndegrees; j++) {
      tmp_rinfo[i].degrees[j].edge = rinfo[i].degrees[j].edge;
      tmp_rinfo[i].degrees[j].ewgt = rinfo[i].degrees[j].ewgt;
    }
  }

  nswaps = nzgswaps = 0;
  /*********************************************************/
  /* perform a small number of passes through the vertices */
  /*********************************************************/
  for (pass=0; pass<npasses; pass++) {
    if (mype == 0)
      RandomPermute(nparts, pperm, 1);
    MPI_Bcast((void *)pperm, nparts, IDX_DATATYPE, 0, ctrl->comm);
    FastRandomPermute(nvtxs, perm, 1);
    oldcut = graph->mincut;

    /* check to see if the partitioning is imbalanced */
    Moc_ComputeParallelBalance(ctrl, graph, graph->where, lbvec);
    ubavg = savg(ncon, ubvec);
    lbavg = savg(ncon, lbvec);
    imbalanced = (lbavg > ubavg) ? 1 : 0;

    for (c=0; c<2; c++) {
      scopy(ncon*nparts, gnpwgts, ognpwgts);
      sset(ncon*nparts, 0.0, movewgts);
      nmoved = 0;

      /**********************************************/
      /* PASS ONE -- record stats for desired moves */
      /**********************************************/
      for (iii=0; iii<nvtxs; iii++) {
        i = perm[iii];
        from = tmp_where[i];
        nvwgt = graph->nvwgt+i*ncon;

        for (h=0; h<ncon; h++)
          if (fabs(nvwgt[h]-gnpwgts[from*ncon+h]) < SMALLFLOAT)
            break;

        if (h < ncon) {
          continue;
        }

        /* check for a potential improvement */
        if (tmp_rinfo[i].ed >= tmp_rinfo[i].id) {
          my_edegrees = tmp_rinfo[i].degrees;

          for (k=0; k<tmp_rinfo[i].ndegrees; k++) {
            to = my_edegrees[k].edge;
            if (ProperSide(c, pperm[from], pperm[to])) {
              for (h=0; h<ncon; h++)
                if (gnpwgts[to*ncon+h]+nvwgt[h] > badmaxpwgt[to*ncon+h] && nvwgt[h] > 0.0)
                  break;

              if (h == ncon)
                break;
            }
          }
          oldto = to;

          /* check if a subdomain was found that fits */
          if (k < tmp_rinfo[i].ndegrees) {
            for (j=k+1; j<tmp_rinfo[i].ndegrees; j++) {
              to = my_edegrees[j].edge;
              if (ProperSide(c, pperm[from], pperm[to])) {
                for (h=0; h<ncon; h++)
                  if (gnpwgts[to*ncon+h]+nvwgt[h] > badmaxpwgt[to*ncon+h] && nvwgt[h] > 0.0)
                    break;

                if (h == ncon) {
                  if (my_edegrees[j].ewgt > my_edegrees[k].ewgt ||
                   (my_edegrees[j].ewgt == my_edegrees[k].ewgt &&
                   IsHBalanceBetterTT(ncon,gnpwgts+oldto*ncon,gnpwgts+to*ncon,nvwgt,ubvec))){
                    k = j;
                    oldto = my_edegrees[k].edge;
                  }
                }
              }
            }
            to = oldto;

            if (my_edegrees[k].ewgt > tmp_rinfo[i].id ||
            (my_edegrees[k].ewgt == tmp_rinfo[i].id &&
            (imbalanced ||  graph->level > 3  || iii % 8 == 0) &&
            IsHBalanceBetterFT(ncon,gnpwgts+from*ncon,gnpwgts+to*ncon,nvwgt,ubvec))){

              /****************************************/
              /* Update tmp arrays of the moved vertex */
              /****************************************/
              tmp_where[i] = to;
              moved[nmoved++] = i;
              for (h=0; h<ncon; h++) {
                lnpwgts[to*ncon+h] += nvwgt[h];
                lnpwgts[from*ncon+h] -= nvwgt[h];
                gnpwgts[to*ncon+h] += nvwgt[h];
                gnpwgts[from*ncon+h] -= nvwgt[h];
                movewgts[to*ncon+h] += nvwgt[h];
                movewgts[from*ncon+h] -= nvwgt[h];
              }

              tmp_rinfo[i].ed += tmp_rinfo[i].id-my_edegrees[k].ewgt;
              SWAP(tmp_rinfo[i].id, my_edegrees[k].ewgt, j);
              if (my_edegrees[k].ewgt == 0) {
                tmp_rinfo[i].ndegrees--;
                my_edegrees[k].edge = my_edegrees[tmp_rinfo[i].ndegrees].edge;
                my_edegrees[k].ewgt = my_edegrees[tmp_rinfo[i].ndegrees].ewgt;
              }
              else {
                my_edegrees[k].edge = from;
              }

              /* Update the degrees of adjacent vertices */
              for (j=xadj[i]; j<xadj[i+1]; j++) {
                /* no need to bother about vertices on different pe's */
                if (ladjncy[j] >= nvtxs)
                  continue;

                me = ladjncy[j];
                mydomain = tmp_where[me];

                myrinfo = tmp_rinfo+me;
                your_edegrees = myrinfo->degrees;

                if (mydomain == from) {
                  INC_DEC(myrinfo->ed, myrinfo->id, adjwgt[j]);
                }
                else {
                  if (mydomain == to) {
                    INC_DEC(myrinfo->id, myrinfo->ed, adjwgt[j]);
                  }
                }

                /* Remove contribution from the .ed of 'from' */
                if (mydomain != from) {
                  for (k=0; k<myrinfo->ndegrees; k++) {
                    if (your_edegrees[k].edge == from) {
                      if (your_edegrees[k].ewgt == adjwgt[j]) {
                        myrinfo->ndegrees--;
                        your_edegrees[k].edge = your_edegrees[myrinfo->ndegrees].edge;
                        your_edegrees[k].ewgt = your_edegrees[myrinfo->ndegrees].ewgt;
                      }
                      else {
                        your_edegrees[k].ewgt -= adjwgt[j];
                      }
                      break;
                    }
                  }
                }

                /* Add contribution to the .ed of 'to' */
                if (mydomain != to) {
                  for (k=0; k<myrinfo->ndegrees; k++) {
                    if (your_edegrees[k].edge == to) {
                      your_edegrees[k].ewgt += adjwgt[j];
                      break;
                    }
                  }
                  if (k == myrinfo->ndegrees) {
                    your_edegrees[myrinfo->ndegrees].edge = to;
                    your_edegrees[myrinfo->ndegrees++].ewgt = adjwgt[j];
                  }
                }
              }
            }
          }
        }
      }

      /******************************************/
      /* Let processors know the subdomain wgts */
      /* if all proposed moves commit.          */
      /******************************************/
      MPI_Allreduce((void *)lnpwgts, (void *)pgnpwgts, nparts*ncon,
      MPI_DOUBLE, MPI_SUM, ctrl->comm);

      /**************************/
      /* compute overfill array */
      /**************************/
      overweight = 0;
      for (j=0; j<nparts; j++) {
        for (h=0; h<ncon; h++) {
          if (pgnpwgts[j*ncon+h] > ognpwgts[j*ncon+h]) {
            overfill[j*ncon+h] =
            (pgnpwgts[j*ncon+h]-badmaxpwgt[j*ncon+h]) /
            (pgnpwgts[j*ncon+h]-ognpwgts[j*ncon+h]);
          }
          else {
            overfill[j*ncon+h] = 0.0;
          }

          overfill[j*ncon+h] = amax(overfill[j*ncon+h], 0.0);
          overfill[j*ncon+h] *= movewgts[j*ncon+h];

          if (overfill[j*ncon+h] > 0.0)
            overweight = 1;

          ASSERTP(ctrl, ognpwgts[j*ncon+h] <= badmaxpwgt[j*ncon+h] ||
          pgnpwgts[j*ncon+h] <= ognpwgts[j*ncon+h],
          (ctrl, "%.4f %.4f %.4f\n", ognpwgts[j*ncon+h],
          badmaxpwgt[j*ncon+h], pgnpwgts[j*ncon+h]));
        }
      }

      /****************************************************/
      /* select moves to undo according to overfill array */
      /****************************************************/
      if (overweight == 1) {
        for (iii=0; iii<nmoved; iii++) {
          i = moved[iii];
          oldto = tmp_where[i];
          nvwgt = graph->nvwgt+i*ncon;
          my_edegrees = tmp_rinfo[i].degrees;

          for (k=0; k<tmp_rinfo[i].ndegrees; k++)
            if (my_edegrees[k].edge == where[i])
              break;

          for (h=0; h<ncon; h++)
            if (nvwgt[h] > 0.0 && overfill[oldto*ncon+h] > nvwgt[h]/4.0)
              break;

          /**********************************/
          /* nullify this move if necessary */
          /**********************************/
          if (k != tmp_rinfo[i].ndegrees && h != ncon) {
            moved[iii] = -1;
            from = oldto;
            to = where[i];

            for (h=0; h<ncon; h++) {
              overfill[oldto*ncon+h] = amax(overfill[oldto*ncon+h]-nvwgt[h], 0.0);
            }

            tmp_where[i] = to;
            tmp_rinfo[i].ed += tmp_rinfo[i].id-my_edegrees[k].ewgt;
            SWAP(tmp_rinfo[i].id, my_edegrees[k].ewgt, j);
            if (my_edegrees[k].ewgt == 0) {
              tmp_rinfo[i].ndegrees--;
              my_edegrees[k].edge = my_edegrees[tmp_rinfo[i].ndegrees].edge;
              my_edegrees[k].ewgt = my_edegrees[tmp_rinfo[i].ndegrees].ewgt;
            }
            else {
              my_edegrees[k].edge = from;
            }

            for (h=0; h<ncon; h++) {
              lnpwgts[to*ncon+h] += nvwgt[h];
              lnpwgts[from*ncon+h] -= nvwgt[h];
            }

            /* Update the degrees of adjacent vertices */
            for (j=xadj[i]; j<xadj[i+1]; j++) {
              /* no need to bother about vertices on different pe's */
              if (ladjncy[j] >= nvtxs)
                continue;

              me = ladjncy[j];
              mydomain = tmp_where[me];

              myrinfo = tmp_rinfo+me;
              your_edegrees = myrinfo->degrees;

              if (mydomain == from) {
                INC_DEC(myrinfo->ed, myrinfo->id, adjwgt[j]);
              }
              else {
                if (mydomain == to) {
                  INC_DEC(myrinfo->id, myrinfo->ed, adjwgt[j]);
                }
              }

              /* Remove contribution from the .ed of 'from' */
              if (mydomain != from) {
                for (k=0; k<myrinfo->ndegrees; k++) {
                  if (your_edegrees[k].edge == from) {
                    if (your_edegrees[k].ewgt == adjwgt[j]) {
                      myrinfo->ndegrees--;
                      your_edegrees[k].edge = your_edegrees[myrinfo->ndegrees].edge;
                      your_edegrees[k].ewgt = your_edegrees[myrinfo->ndegrees].ewgt;
                    }
                    else {
                      your_edegrees[k].ewgt -= adjwgt[j];
                    }
                    break;
                  }
                }
              }

              /* Add contribution to the .ed of 'to' */
              if (mydomain != to) {
                for (k=0; k<myrinfo->ndegrees; k++) {
                  if (your_edegrees[k].edge == to) {
                    your_edegrees[k].ewgt += adjwgt[j];
                    break;
                  }
                }
                if (k == myrinfo->ndegrees) {
                  your_edegrees[myrinfo->ndegrees].edge = to;
                  your_edegrees[myrinfo->ndegrees++].ewgt = adjwgt[j];
                }
              }
            }
          }
        }
      }

      /*************************************************/
      /* PASS TWO -- commit the remainder of the moves */
      /*************************************************/
      nlupd = nsupd = nmoves = nchanged = 0;
      for (iii=0; iii<nmoved; iii++) {
        i = moved[iii];
        if (i == -1)
          continue;

        where[i] = tmp_where[i];

        /* Make sure to update the vertex information */
        if (htable[i] == 0) {
          /* make sure you do the update */
          htable[i] = 1;
          update[nlupd++] = i;
        }

        /* Put the vertices adjacent to i into the update array */
        for (j=xadj[i]; j<xadj[i+1]; j++) {
          k = ladjncy[j];
          if (htable[k] == 0) {
            htable[k] = 1;
            if (k<nvtxs)
              update[nlupd++] = k;
            else
              supdate[nsupd++] = k;
          }
        }
        nmoves++;
        nswaps++;

        /* check number of zero-gain moves */
        for (k=0; k<rinfo[i].ndegrees; k++)
          if (rinfo[i].degrees[k].edge == to)
            break;
        if (rinfo[i].id == rinfo[i].degrees[k].ewgt)
          nzgswaps++;

        if (graph->pexadj[i+1]-graph->pexadj[i] > 0)
          changed[nchanged++] = i;
      }

      /* Tell interested pe's the new where[] info for the interface vertices */
      CommChangedInterfaceData(ctrl, graph, nchanged, changed, where,
      swchanges, rwchanges, wspace->pv4); 


      IFSET(ctrl->dbglvl, DBG_RMOVEINFO,
      rprintf(ctrl, "\t[%d %d], [%.4f],  [%d %d %d]\n",
      pass, c, badmaxpwgt[0],
      GlobalSESum(ctrl, nmoves),
      GlobalSESum(ctrl, nsupd),
      GlobalSESum(ctrl, nlupd)));

      /*-------------------------------------------------------------
      / Time to communicate with processors to send the vertices
      / whose degrees need to be update.
      /-------------------------------------------------------------*/
      /* Issue the receives first */
      for (i=0; i<nnbrs; i++) {
        MPI_Irecv((void *)(rupdate+sendptr[i]), sendptr[i+1]-sendptr[i], IDX_DATATYPE,
                  peind[i], 1, ctrl->comm, ctrl->rreq+i);
      }

      /* Issue the sends next. This needs some preporcessing */
      for (i=0; i<nsupd; i++) {
        htable[supdate[i]] = 0;
        supdate[i] = graph->imap[supdate[i]];
      }
      iidxsort(nsupd, supdate);

      for (j=i=0; i<nnbrs; i++) {
        yourlastvtx = vtxdist[peind[i]+1];
        for (k=j; k<nsupd && supdate[k] < yourlastvtx; k++); 
        MPI_Isend((void *)(supdate+j), k-j, IDX_DATATYPE, peind[i], 1, ctrl->comm, ctrl->sreq+i);
        j = k;
      }

      /* OK, now get into the loop waiting for the send/recv operations to finish */
      MPI_Waitall(nnbrs, ctrl->rreq, ctrl->statuses);
      for (i=0; i<nnbrs; i++) 
        MPI_Get_count(ctrl->statuses+i, IDX_DATATYPE, nupds_pe+i);
      MPI_Waitall(nnbrs, ctrl->sreq, ctrl->statuses);


      /*-------------------------------------------------------------
      / Place the recieved to-be updated vertices into update[] 
      /-------------------------------------------------------------*/
      for (i=0; i<nnbrs; i++) {
        pe_updates = rupdate+sendptr[i];
        for (j=0; j<nupds_pe[i]; j++) {
          k = pe_updates[j];
          if (htable[k-firstvtx] == 0) {
            htable[k-firstvtx] = 1;
            update[nlupd++] = k-firstvtx;
          }
        }
      }


      /*-------------------------------------------------------------
      / Update the rinfo of the vertices in the update[] array
      /-------------------------------------------------------------*/
      for (ii=0; ii<nlupd; ii++) {
        i = update[ii];
        ASSERT(ctrl, htable[i] == 1);

        htable[i] = 0;

        mydomain = where[i];
        myrinfo = rinfo+i;
        tmp_myrinfo = tmp_rinfo+i;
        my_edegrees = myrinfo->degrees;
        your_edegrees = tmp_myrinfo->degrees;

        graph->lmincut -= myrinfo->ed;
        myrinfo->ndegrees = 0;
        myrinfo->id = 0;
        myrinfo->ed = 0;

        for (j=xadj[i]; j<xadj[i+1]; j++) {
          yourdomain = where[ladjncy[j]];
          if (mydomain != yourdomain) {
            myrinfo->ed += adjwgt[j];

            for (k=0; k<myrinfo->ndegrees; k++) {
              if (my_edegrees[k].edge == yourdomain) {
                my_edegrees[k].ewgt += adjwgt[j];
                your_edegrees[k].ewgt += adjwgt[j];
                break;
              }
            }
            if (k == myrinfo->ndegrees) {
              my_edegrees[k].edge = yourdomain;
              my_edegrees[k].ewgt = adjwgt[j];
              your_edegrees[k].edge = yourdomain;
              your_edegrees[k].ewgt = adjwgt[j];
              myrinfo->ndegrees++;
            }
            ASSERT(ctrl, myrinfo->ndegrees <= xadj[i+1]-xadj[i]);
            ASSERT(ctrl, tmp_myrinfo->ndegrees <= xadj[i+1]-xadj[i]);

          }
          else {
            myrinfo->id += adjwgt[j];
          }
        }
        graph->lmincut += myrinfo->ed;

        tmp_myrinfo->id = myrinfo->id;
        tmp_myrinfo->ed = myrinfo->ed;
        tmp_myrinfo->ndegrees = myrinfo->ndegrees;
      }

      /* finally, sum-up the partition weights */
      MPI_Allreduce((void *)lnpwgts, (void *)gnpwgts, nparts*ncon,
      MPI_DOUBLE, MPI_SUM, ctrl->comm);
    }
    graph->mincut = GlobalSESum(ctrl, graph->lmincut)/2;

    if (graph->mincut == oldcut)
      break;
  }

/*
  gnswaps = GlobalSESum(ctrl, nswaps);
  gnzgswaps = GlobalSESum(ctrl, nzgswaps);
  if (mype == 0)
    printf("niters: %d, nswaps: %d, nzgswaps: %d\n", pass+1, gnswaps, gnzgswaps);
*/

  GKfree((void **)&badmaxpwgt, (void **)&update, (void **)&nupds_pe, (void **)&htable, LTERM);
  GKfree((void **)&changed, (void **)&pperm, (void **)&perm, (void **)&moved, LTERM);
  GKfree((void **)&pgnpwgts, (void **)&ognpwgts, (void **)&overfill, (void **)&movewgts, LTERM);
  GKfree((void **)&tmp_where, (void **)&tmp_rinfo, (void **)&tmp_edegrees, LTERM);

  IFSET(ctrl->dbglvl, DBG_TIME, stoptimer(ctrl->KWayTmr));
}
Beispiel #2
0
/*************************************************************************
* This function performs an edge-based FM refinement
**************************************************************************/
int BalanceMyLink(CtrlType *ctrl, GraphType *graph, idxtype *home, int me,
  int you, float *flows, float maxdiff, float *diff_cost, float *diff_lbavg,
  float avgvwgt)
{
  int h, i, ii, j, k;
  int nvtxs, ncon;
  int nqueues, minval, maxval, higain, vtx, edge, totalv;
  int from, to, qnum, index, nchanges, cut, tmp;
  int pass, nswaps, nmoves, multiplier;
  idxtype *xadj, *vsize, *adjncy, *adjwgt, *where, *ed, *id;
  idxtype *hval, *nvpq, *inq, *map, *rmap, *ptr, *myqueue, *changes;
  float *nvwgt, lbvec[MAXNCON], pwgts[MAXNCON*2], tpwgts[MAXNCON*2], my_wgt[MAXNCON];
  float newgain, oldgain = 0.0;
  float lbavg, bestflow, mycost;
  float ipc_factor, redist_factor, ftmp;
  FPQueueType *queues;
int mype;
MPI_Comm_rank(MPI_COMM_WORLD, &mype);

  nvtxs = graph->nvtxs;
  ncon = graph->ncon;
  xadj = graph->xadj;
  nvwgt = graph->nvwgt;
  vsize = graph->vsize;
  adjncy = graph->adjncy;
  adjwgt = graph->adjwgt;
  where = graph->where;
  ipc_factor = ctrl->ipc_factor;
  redist_factor = ctrl->redist_factor;

  hval = idxmalloc(nvtxs*7, "hval");
  id = hval + nvtxs;
  ed = hval + nvtxs*2;
  map = hval + nvtxs*3;
  rmap = hval + nvtxs*4;
  myqueue = hval + nvtxs*5;
  changes = hval + nvtxs*6;

  sset(ncon*2, 0.0, pwgts);
  for (h=0; h<ncon; h++) {
    tpwgts[h] = -1.0 * flows[h];
    tpwgts[ncon+h] = flows[h];
  }

  for (i=0; i<nvtxs; i++) {
    if (where[i] == me) {
      for (h=0; h<ncon; h++) {
        tpwgts[h] += nvwgt[i*ncon+h];
        pwgts[h] += nvwgt[i*ncon+h];
      }
    }
    else {
      ASSERTS(where[i] == you);
      for (h=0; h<ncon; h++) {
        tpwgts[ncon+h] += nvwgt[i*ncon+h];
        pwgts[ncon+h] += nvwgt[i*ncon+h];
      }
    }
  }

  /* we don't want any tpwgts to be less than zero */
  for (h=0; h<ncon; h++) {
    if (tpwgts[h] < 0.0) {
      tpwgts[ncon+h] += tpwgts[h];
      tpwgts[h] = 0.0;
    }

    if (tpwgts[ncon+h] < 0.0) {
      tpwgts[h] += tpwgts[ncon+h];
      tpwgts[ncon+h] = 0.0;
    }
  }

  /*******************************/
  /* insert vertices into queues */
  /*******************************/
  minval = maxval = 0;
  multiplier = 1;
  for (i=0; i<ncon; i++) {
    multiplier *= (i+1);
    maxval += i*multiplier;
    minval += (ncon-1-i)*multiplier;
  }

  nqueues = maxval-minval+1;
  nvpq = idxsmalloc(nqueues, 0, "nvpq");
  ptr = idxmalloc(nqueues+1, "ptr");
  inq = idxmalloc(nqueues*2, "inq");
  queues = (FPQueueType *)(GKmalloc(sizeof(FPQueueType)*nqueues*2, "queues"));

  for (i=0; i<nvtxs; i++)
    hval[i] = Moc_HashVwgts(ncon, nvwgt+i*ncon) - minval;

  for (i=0; i<nvtxs; i++)
    nvpq[hval[i]]++;

  ptr[0] = 0;
  for (i=0; i<nqueues; i++)
    ptr[i+1] = ptr[i] + nvpq[i];

  for (i=0; i<nvtxs; i++) {
    map[i] = ptr[hval[i]];
    rmap[ptr[hval[i]]++] = i;
  }

  for (i=nqueues-1; i>0; i--)
    ptr[i] = ptr[i-1];
  ptr[0] = 0;

  /* initialize queues */
  for (i=0; i<nqueues; i++)
    if (nvpq[i] > 0) {
      FPQueueInit(queues+i, nvpq[i]);
      FPQueueInit(queues+i+nqueues, nvpq[i]);
    }

  /* compute internal/external degrees */
  idxset(nvtxs, 0, id);
  idxset(nvtxs, 0, ed);
  for (j=0; j<nvtxs; j++)
    for (k=xadj[j]; k<xadj[j+1]; k++)
      if (where[adjncy[k]] == where[j])
        id[j] += adjwgt[k];
      else 
        ed[j] += adjwgt[k];

  nswaps = 0;
  for (pass=0; pass<N_MOC_BAL_PASSES; pass++) {
    idxset(nvtxs, -1, myqueue); 
    idxset(nqueues*2, 0, inq);

    /* insert vertices into correct queues */
    for (j=0; j<nvtxs; j++) {
      index = (where[j] == me) ? 0 : nqueues;

      newgain = ipc_factor*(float)(ed[j]-id[j]);
      if (home[j] == me || home[j] == you) {
        if (where[j] == home[j])
          newgain -= redist_factor*(float)vsize[j];
        else
          newgain += redist_factor*(float)vsize[j];
      }

      FPQueueInsert(queues+hval[j]+index, map[j]-ptr[hval[j]], newgain);
      myqueue[j] = (where[j] == me) ? 0 : 1;
      inq[hval[j]+index]++;
    }

/*    bestflow = sfavg(ncon, flows); */
    for (j=0, h=0; h<ncon; h++)
      if (fabs(flows[h]) > fabs(flows[j])) j = h;
        bestflow = fabs(flows[j]);

    nchanges = nmoves = 0;
    for (ii=0; ii<nvtxs/2; ii++) {
      from = -1;
      Moc_DynamicSelectQueue(nqueues, ncon, me, you, inq, flows, &from,
      &qnum, minval, avgvwgt, maxdiff);

      /* can't find a vertex in one subdomain, try the other */
      if (from != -1 && qnum == -1) {
        from = (from == me) ? you : me;

        if (from == me) {
          for (j=0; j<ncon; j++)
            if (flows[j] > avgvwgt)
              break;
        }
        else {
          for (j=0; j<ncon; j++)
            if (flows[j] < -1.0*avgvwgt)
              break;
        }

        if (j != ncon)
          Moc_DynamicSelectQueue(nqueues, ncon, me, you, inq, flows, &from,
          &qnum, minval, avgvwgt, maxdiff);
      }

      if (qnum == -1)
        break;

      to = (from == me) ? you : me;
      index = (from == me) ? 0 : nqueues;
      higain = FPQueueGetMax(queues+qnum+index);
      inq[qnum+index]--;
      ASSERTS(higain != -1);

      /*****************/
      /* make the swap */
      /*****************/
      vtx = rmap[higain+ptr[qnum]];
      myqueue[vtx] = -1;
      where[vtx] = to;
      nswaps++;
      nmoves++;

      /* update the flows */
      for (j=0; j<ncon; j++)
        flows[j] += (to == me) ? nvwgt[vtx*ncon+j] : -1.0*nvwgt[vtx*ncon+j];
 
/*      ftmp = sfavg(ncon, flows); */
      for (j=0, h=0; h<ncon; h++)
        if (fabs(flows[h]) > fabs(flows[j])) j = h;
          ftmp = fabs(flows[j]);

      if (ftmp < bestflow) {
        bestflow = ftmp;
        nchanges = 0;
      }
      else {
        changes[nchanges++] = vtx;
      }

      SWAP(id[vtx], ed[vtx], tmp);

      for (j=xadj[vtx]; j<xadj[vtx+1]; j++) {
        edge = adjncy[j];

        /* must compute oldgain before changing id/ed */
        if (myqueue[edge] != -1) {
          oldgain = ipc_factor*(float)(ed[edge]-id[edge]);
          if (home[edge] == me || home[edge] == you) {
            if (where[edge] == home[edge])
              oldgain -= redist_factor*(float)vsize[edge];
            else
              oldgain += redist_factor*(float)vsize[edge];
          }
        }

        tmp = (to == where[edge] ? adjwgt[j] : -adjwgt[j]);
        INC_DEC(id[edge], ed[edge], tmp);

        if (myqueue[edge] != -1) {
          newgain = ipc_factor*(float)(ed[edge]-id[edge]);
          if (home[edge] == me || home[edge] == you) {
            if (where[edge] == home[edge])
              newgain -= redist_factor*(float)vsize[edge];
            else
              newgain += redist_factor*(float)vsize[edge];
          }

          FPQueueUpdate(queues+hval[edge]+(nqueues*myqueue[edge]),
          map[edge]-ptr[hval[edge]], oldgain, newgain);
        }
      }
    }

    /****************************/
    /* now go back to best flow */
    /****************************/
    nswaps -= nchanges;
    nmoves -= nchanges;
    for (i=0; i<nchanges; i++) {
      vtx = changes[i];
      from = where[vtx];
      where[vtx] = to = (from == me) ? you : me;

      SWAP(id[vtx], ed[vtx], tmp);
      for (j=xadj[vtx]; j<xadj[vtx+1]; j++) {
        edge = adjncy[j];
        tmp = (to == where[edge] ? adjwgt[j] : -adjwgt[j]);
        INC_DEC(id[edge], ed[edge], tmp);
      }
    }

    for (i=0; i<nqueues; i++) {
      if (nvpq[i] > 0) {
        FPQueueReset(queues+i);
        FPQueueReset(queues+i+nqueues);
      }
    }

    if (nmoves == 0)
      break;
  }

  /***************************/
  /* compute 2-way imbalance */
  /***************************/
  sset(ncon, 0.0, my_wgt);
  for (i=0; i<nvtxs; i++)
    if (where[i] == me)
      for (h=0; h<ncon; h++)
        my_wgt[h] += nvwgt[i*ncon+h];

  for (i=0; i<ncon; i++) {
    ftmp =  (pwgts[i]+pwgts[ncon+i])/2.0;
    if (ftmp != 0.0)
      lbvec[i] = fabs(my_wgt[i]-tpwgts[i]) / ftmp;
    else
      lbvec[i] = 0.0;
  }
  lbavg = savg(ncon, lbvec);
  *diff_lbavg = lbavg;

  /****************/
  /* compute cost */
  /****************/
  cut = totalv = 0;
  for (i=0; i<nvtxs; i++) {
    if (where[i] != home[i])
      totalv += vsize[i];

      for (j=xadj[i]; j<xadj[i+1]; j++) 
        if (where[adjncy[j]] != where[i])
          cut += adjwgt[j];
  }
  cut /= 2;
  mycost = cut*ipc_factor + totalv*redist_factor;
  *diff_cost = mycost;

  /* free memory */
  for (i=0; i<nqueues; i++)
    if (nvpq[i] > 0) {
      FPQueueFree(queues+i);
      FPQueueFree(queues+i+nqueues);
    }

  GKfree((void **)&hval, (void **)&nvpq, (void **)&ptr, (void **)&inq, (void **)&queues, LTERM);
  return nswaps;
}
Beispiel #3
0
/*************************************************************************
* This function is the driver for the adaptive refinement mode of ParMETIS
**************************************************************************/
void Adaptive_Partition(CtrlType *ctrl, GraphType *graph, WorkSpaceType *wspace)
{
  int i;
  int tewgt, tvsize;
  floattype gtewgt, gtvsize;
  floattype ubavg, lbavg, lbvec[MAXNCON];

  /************************************/
  /* Set up important data structures */
  /************************************/
  SetUp(ctrl, graph, wspace);

  ubavg   = savg(graph->ncon, ctrl->ubvec);
  tewgt   = idxsum(graph->nedges, graph->adjwgt);
  tvsize  = idxsum(graph->nvtxs, graph->vsize);
  gtewgt  = (floattype) GlobalSESum(ctrl, tewgt) + 1.0;  /* The +1 were added to remove any FPE */
  gtvsize = (floattype) GlobalSESum(ctrl, tvsize) + 1.0;
  ctrl->redist_factor = ctrl->redist_base * ((gtewgt/gtvsize)/ ctrl->edge_size_ratio);

  IFSET(ctrl->dbglvl, DBG_PROGRESS, rprintf(ctrl, "[%6d %8d %5d %5d][%d]\n", 
        graph->gnvtxs, GlobalSESum(ctrl, graph->nedges), GlobalSEMin(ctrl, graph->nvtxs), GlobalSEMax(ctrl, graph->nvtxs), ctrl->CoarsenTo));

  if (graph->gnvtxs < 1.3*ctrl->CoarsenTo ||
     (graph->finer != NULL && graph->gnvtxs > graph->finer->gnvtxs*COARSEN_FRACTION)) {

    /***********************************************/
    /* Balance the partition on the coarsest graph */
    /***********************************************/
    graph->where = idxsmalloc(graph->nvtxs+graph->nrecv, -1, "graph->where");
    idxcopy(graph->nvtxs, graph->home, graph->where);

    Moc_ComputeParallelBalance(ctrl, graph, graph->where, lbvec);
    lbavg = savg(graph->ncon, lbvec);

    if (lbavg > ubavg + 0.035 && ctrl->partType != REFINE_PARTITION)
      Balance_Partition(ctrl, graph, wspace);

    if (ctrl->dbglvl&DBG_PROGRESS) {
      Moc_ComputeParallelBalance(ctrl, graph, graph->where, lbvec);
      rprintf(ctrl, "nvtxs: %10d, balance: ", graph->gnvtxs);
      for (i=0; i<graph->ncon; i++) 
        rprintf(ctrl, "%.3f ", lbvec[i]);
      rprintf(ctrl, "\n");
    }

    /* check if no coarsening took place */
    if (graph->finer == NULL) {
      Moc_ComputePartitionParams(ctrl, graph, wspace);
      Moc_KWayBalance(ctrl, graph, wspace, graph->ncon);
      Moc_KWayAdaptiveRefine(ctrl, graph, wspace, NGR_PASSES);
    }
  }
  else {
    /*******************************/
    /* Coarsen it and partition it */
    /*******************************/
    switch (ctrl->ps_relation) {
      case COUPLED:
        Mc_LocalMatch_HEM(ctrl, graph, wspace);
        break;
      case DISCOUPLED:
      default:
        Moc_GlobalMatch_Balance(ctrl, graph, wspace);
        break;
    }

    Adaptive_Partition(ctrl, graph->coarser, wspace);

    /********************************/
    /* project partition and refine */
    /********************************/
    Moc_ProjectPartition(ctrl, graph, wspace);
    Moc_ComputePartitionParams(ctrl, graph, wspace);

    if (graph->ncon > 1 && graph->level < 4) {
      Moc_ComputeParallelBalance(ctrl, graph, graph->where, lbvec);
      lbavg = savg(graph->ncon, lbvec);

      if (lbavg > ubavg + 0.025) {
        Moc_KWayBalance(ctrl, graph, wspace, graph->ncon);
      }
    }

    Moc_KWayAdaptiveRefine(ctrl, graph, wspace, NGR_PASSES);

    if (ctrl->dbglvl&DBG_PROGRESS) {
      Moc_ComputeParallelBalance(ctrl, graph, graph->where, lbvec);
      rprintf(ctrl, "nvtxs: %10d, cut: %8d, balance: ", graph->gnvtxs, graph->mincut);
      for (i=0; i<graph->ncon; i++) 
        rprintf(ctrl, "%.3f ", lbvec[i]);
      rprintf(ctrl, "\n");
    }
  }
}
Beispiel #4
0
/*************************************************************************
* This function is the driver to the multi-constraint partitioning algorithm.
**************************************************************************/
void Moc_Global_Partition(CtrlType *ctrl, GraphType *graph, WorkSpaceType *wspace)
{
  int i, ncon, nparts;
  floattype ftmp, ubavg, lbavg, lbvec[MAXNCON];
 
  ncon = graph->ncon;
  nparts = ctrl->nparts;
  ubavg = savg(graph->ncon, ctrl->ubvec);

  SetUp(ctrl, graph, wspace);

  if (ctrl->dbglvl&DBG_PROGRESS) {
    rprintf(ctrl, "[%6d %8d %5d %5d] [%d] [", graph->gnvtxs, GlobalSESum(ctrl, graph->nedges),
	    GlobalSEMin(ctrl, graph->nvtxs), GlobalSEMax(ctrl, graph->nvtxs), ctrl->CoarsenTo);
    for (i=0; i<ncon; i++)
      rprintf(ctrl, " %.3f", GlobalSEMinFloat(ctrl,graph->nvwgt[samin_strd(graph->nvtxs, graph->nvwgt+i, ncon)*ncon+i]));  
    rprintf(ctrl, "] [");
    for (i=0; i<ncon; i++)
      rprintf(ctrl, " %.3f", GlobalSEMaxFloat(ctrl, graph->nvwgt[samax_strd(graph->nvtxs, graph->nvwgt+i, ncon)*ncon+i]));  
    rprintf(ctrl, "]\n");
  }

  if (graph->gnvtxs < 1.3*ctrl->CoarsenTo ||
	(graph->finer != NULL &&
	graph->gnvtxs > graph->finer->gnvtxs*COARSEN_FRACTION)) {

    /* Done with coarsening. Find a partition */
    graph->where = idxmalloc(graph->nvtxs+graph->nrecv, "graph->where");
    Moc_InitPartition_RB(ctrl, graph, wspace);

    if (ctrl->dbglvl&DBG_PROGRESS) {
      Moc_ComputeParallelBalance(ctrl, graph, graph->where, lbvec);
      rprintf(ctrl, "nvtxs: %10d, balance: ", graph->gnvtxs);
      for (i=0; i<graph->ncon; i++) 
        rprintf(ctrl, "%.3f ", lbvec[i]);
      rprintf(ctrl, "\n");
    }

    /* In case no coarsening took place */
    if (graph->finer == NULL) {
      Moc_ComputePartitionParams(ctrl, graph, wspace);
      Moc_KWayFM(ctrl, graph, wspace, NGR_PASSES);
    }
  }
  else {
    Moc_GlobalMatch_Balance(ctrl, graph, wspace);

    Moc_Global_Partition(ctrl, graph->coarser, wspace);

    Moc_ProjectPartition(ctrl, graph, wspace);
    Moc_ComputePartitionParams(ctrl, graph, wspace);

    if (graph->ncon > 1 && graph->level < 3) {
      for (i=0; i<ncon; i++) {
        ftmp = ssum_strd(nparts, graph->gnpwgts+i, ncon);
        if (ftmp != 0.0)
          lbvec[i] = (floattype)(nparts) *
          graph->gnpwgts[samax_strd(nparts, graph->gnpwgts+i, ncon)*ncon+i]/ftmp;
        else
          lbvec[i] = 1.0;
      }
      lbavg = savg(graph->ncon, lbvec);

      if (lbavg > ubavg + 0.035) {
        if (ctrl->dbglvl&DBG_PROGRESS) {
          Moc_ComputeParallelBalance(ctrl, graph, graph->where, lbvec);
          rprintf(ctrl, "nvtxs: %10d, cut: %8d, balance: ", graph->gnvtxs, graph->mincut);
          for (i=0; i<graph->ncon; i++) 
            rprintf(ctrl, "%.3f ", lbvec[i]);
          rprintf(ctrl, "\n");
	}

        Moc_KWayBalance(ctrl, graph, wspace, graph->ncon);
      }
    }

    Moc_KWayFM(ctrl, graph, wspace, NGR_PASSES);

    if (ctrl->dbglvl&DBG_PROGRESS) {
      Moc_ComputeParallelBalance(ctrl, graph, graph->where, lbvec);
      rprintf(ctrl, "nvtxs: %10d, cut: %8d, balance: ", graph->gnvtxs, graph->mincut);
      for (i=0; i<graph->ncon; i++) 
        rprintf(ctrl, "%.3f ", lbvec[i]);
      rprintf(ctrl, "\n");
    }

    if (graph->level != 0)
      GKfree((void **)&graph->lnpwgts, (void **)&graph->gnpwgts, LTERM);
  }

  return;
}