void MantidMatrix::setup(Mantid::API::MatrixWorkspace_const_sptr ws, int start,
int end) {
if (!ws) {
QMessageBox::critical(0, "WorkspaceMatrixModel error",
"2D workspace expected.");
m_rows = 0;
m_cols = 0;
m_startRow = 0;
m_endRow = 0;
return;
}
m_workspace = ws;
m_workspaceTotalHist = static_cast<int>(ws->getNumberHistograms());
m_startRow = (start < 0 || start >= m_workspaceTotalHist) ? 0 : start;
m_endRow = (end < 0 || end >= m_workspaceTotalHist || end < start)
? m_workspaceTotalHist - 1
: end;
m_rows = m_endRow - m_startRow + 1;
m_cols = static_cast<int>(ws->blocksize());
if (ws->isHistogramData())
m_histogram = true;
connect(this, SIGNAL(needsUpdating()), this, SLOT(repaintAll()));
m_bk_color = QColor(128, 255, 255);
m_matrix_icon = getQPixmap("mantid_matrix_xpm");
m_column_width = 100;
}
/**
* Sum counts in detectors for purposes of rough plotting against the units on the x-axis.
* Assumes that all spectra share the x vector.
*
* @param dets :: A list of detector IDs to sum.
* @param x :: (output) Time of flight values (or whatever values the x axis has) to plot against.
* @param y :: (output) The sums of the counts for each bin.
*/
void InstrumentActor::sumDetectorsUniform(QList<int>& dets, std::vector<double>&x, std::vector<double>&y) const
{
size_t wi;
bool isDataEmpty = dets.isEmpty();
if ( !isDataEmpty )
{
try {
wi = getWorkspaceIndex( dets[0] );
} catch (Mantid::Kernel::Exception::NotFoundError &) {
isDataEmpty = true; // Detector doesn't have a workspace index relating to it
}
}
if ( isDataEmpty )
{
x.clear();
y.clear();
return;
}
// find the bins inside the integration range
size_t imin,imax;
getBinMinMaxIndex(wi,imin,imax);
Mantid::API::MatrixWorkspace_const_sptr ws = getWorkspace();
const Mantid::MantidVec& X = ws->readX(wi);
x.assign(X.begin() + imin, X.begin() + imax);
if ( ws->isHistogramData() )
{
// calculate the bin centres
std::transform(x.begin(),x.end(),X.begin() + imin + 1,x.begin(),std::plus<double>());
std::transform(x.begin(),x.end(),x.begin(),std::bind2nd(std::divides<double>(),2.0));
}
y.resize(x.size(),0);
// sum the spectra
foreach(int id, dets)
{
try {
size_t index = getWorkspaceIndex( id );
const Mantid::MantidVec& Y = ws->readY(index);
std::transform(y.begin(),y.end(),Y.begin() + imin,y.begin(),std::plus<double>());
} catch (Mantid::Kernel::Exception::NotFoundError &) {
continue; // Detector doesn't have a workspace index relating to it
}
}
}
/**
* Find the offsets in the spectrum's x vector of the bounds of integration.
* @param wi :: The works[ace index of the spectrum.
* @param imin :: Index of the lower bound: x_min == readX(wi)[imin]
* @param imax :: Index of the upper bound: x_max == readX(wi)[imax]
*/
void InstrumentActor::getBinMinMaxIndex( size_t wi, size_t& imin, size_t& imax ) const
{
Mantid::API::MatrixWorkspace_const_sptr ws = getWorkspace();
const Mantid::MantidVec& x = ws->readX(wi);
Mantid::MantidVec::const_iterator x_begin = x.begin();
Mantid::MantidVec::const_iterator x_end = x.end();
if (x_begin == x_end)
{
throw std::runtime_error("No bins found to plot");
}
if (ws->isHistogramData())
{
--x_end;
}
if ( wholeRange() )
{
imin = 0;
imax = static_cast<size_t>(x_end - x_begin);
}
else
{
Mantid::MantidVec::const_iterator x_from = std::lower_bound( x_begin, x_end, minBinValue() );
Mantid::MantidVec::const_iterator x_to = std::upper_bound( x_begin, x_end, maxBinValue() );
imin = static_cast<size_t>(x_from - x_begin);
imax = static_cast<size_t>(x_to - x_begin);
if (imax <= imin)
{
if (x_from == x_end)
{
--x_from;
x_to = x_end;
}
else
{
x_to = x_from + 1;
}
imin = static_cast<size_t>(x_from - x_begin);
imax = static_cast<size_t>(x_to - x_begin);
}
}
}
/**
* @param g :: The Graph widget which will display the curve
* @param distr :: True for a distribution
* @param style :: The curve type to use
*/
void MantidMatrixCurve::init(Graph *g, bool distr,
GraphOptions::CurveType style) {
// Will throw if name not found but return NULL ptr if the type is incorrect
MatrixWorkspace_const_sptr workspace =
AnalysisDataService::Instance().retrieveWS<MatrixWorkspace>(
m_wsName.toStdString());
if (!workspace) // The respective *Data classes will check for index validity
{
std::stringstream ss;
ss << "Workspace named '" << m_wsName.toStdString()
<< "' found but it is not a MatrixWorkspace. ID='"
<< AnalysisDataService::Instance().retrieve(m_wsName.toStdString())->id()
<< "'";
throw std::invalid_argument(ss.str());
}
// Set the curve name if it the non-naming constructor was called
if (this->title().isEmpty()) {
// If there's only one spectrum in the workspace, title is simply workspace
// name
if (workspace->getNumberHistograms() == 1)
this->setTitle(m_wsName);
else
this->setTitle(createCurveName(workspace));
}
Mantid::API::MatrixWorkspace_const_sptr matrixWS =
boost::dynamic_pointer_cast<const Mantid::API::MatrixWorkspace>(
workspace);
// we need to censor the data if there is a log scale because it can't deal
// with negative values, only the y-axis has been found to be problem so far
const bool log = g->isLog(QwtPlot::yLeft);
// Y units are the same for both spectrum and bin plots, e.g. counts
m_yUnits.reset(new Mantid::Kernel::Units::Label(matrixWS->YUnit(),
matrixWS->YUnitLabel()));
if (m_indexType == Spectrum) // Spectrum plot
{
QwtWorkspaceSpectrumData data(*matrixWS, m_index, log, distr);
setData(data);
// For spectrum plots, X axis are actual X axis, e.g. TOF
m_xUnits = matrixWS->getAxis(0)->unit();
} else // Bin plot
{
QwtWorkspaceBinData data(*matrixWS, m_index, log);
setData(data);
// For bin plots, X axis are "spectra axis", e.g. spectra numbers
m_xUnits = matrixWS->getAxis(1)->unit();
}
if (!m_xUnits) {
m_xUnits.reset(new Mantid::Kernel::Units::Empty());
}
int lineWidth = 1;
MultiLayer *ml = dynamic_cast<MultiLayer *>(g->parent()->parent()->parent());
if (ml && (style == GraphOptions::Unspecified ||
ml->applicationWindow()->applyCurveStyleToMantid)) {
applyStyleChoice(style, ml, lineWidth);
} else if (matrixWS->isHistogramData() && !matrixWS->isDistribution()) {
setStyle(QwtPlotCurve::Steps);
setCurveAttribute(
Inverted,
true); // this is the Steps style modifier that makes horizontal steps
} else {
setStyle(QwtPlotCurve::Lines);
}
g->insertCurve(this, lineWidth);
// set the option to draw all error bars from the global settings
if (hasErrorBars()) {
setErrorBars(true, g->multiLayer()->applicationWindow()->drawAllErrors);
}
// Initialise error bar colour to match curve colour
m_errorSettings->m_color = pen().color();
m_errorSettings->setWidth(pen().widthF());
connect(g, SIGNAL(axisScaleChanged(int, bool)), this,
SLOT(axisScaleChanged(int, bool)));
observePostDelete();
connect(this, SIGNAL(resetData(const QString &)), this,
SLOT(dataReset(const QString &)));
observeAfterReplace();
observeADSClear();
}
