C++ (Cpp) gt_option_delete Exemples

Exemple #1

Fichier : gt_encseq2spm.c Projet : 9beckert/TIR

static void gt_encseq2spm_arguments_delete(void *tool_arguments)
{
    GtEncseq2spmArguments *arguments = tool_arguments;
    if (!arguments) return;
    gt_str_delete(arguments->encseqinput);
    gt_str_delete(arguments->spmspec);
    gt_option_delete(arguments->refoptionmemlimit);
    gt_option_delete(arguments->refoptionphase2extra);
    gt_str_delete(arguments->memlimitarg);
    gt_str_delete(arguments->phase2extraarg);
    gt_free(arguments);
}

Exemple #2

Fichier : gt_seed_extend.c Projet : Hanimal/genometools

static void gt_seed_extend_arguments_delete(void *tool_arguments)
{
  GtSeedExtendArguments *arguments = tool_arguments;
  if (arguments != NULL) {
    gt_str_delete(arguments->dbs_indexname);
    gt_str_delete(arguments->dbs_queryname);
    gt_str_delete(arguments->dbs_memlimit_str);
    gt_str_delete(arguments->se_char_access_mode);
    gt_option_delete(arguments->se_option_greedy);
    gt_option_delete(arguments->se_option_xdrop);
    gt_option_delete(arguments->se_option_withali);
    gt_free(arguments);
  }
}

Exemple #3

static void gt_cge_spacedseed_arguments_delete(void *tool_arguments)
{
  Cge_spacedseed_options *arguments = tool_arguments;

  if (!arguments)
  {
    return;
  }
  gt_str_delete(arguments->str_inputindex);
  gt_str_array_delete(arguments->queryfilenames);
  gt_option_delete(arguments->refoptionpckindex);
  gt_option_delete(arguments->refoptionesaindex);
  gt_free(arguments);
}

Exemple #4

static void gt_idxlocali_arguments_delete (void *tool_arguments)
{
  IdxlocaliOptions *arguments = tool_arguments;

  if (!arguments)
  {
    return;
  }
  gt_str_delete (arguments->indexname);
  gt_str_array_delete (arguments->queryfiles);
  gt_option_delete (arguments->refoptionesaindex);
  gt_option_delete (arguments->refoptionpckindex);
  gt_free (arguments);
}

Exemple #5

Fichier : xrfcheck_info.c Projet : AlexWoroschilow/uni_hamburg

void gt_xrfcheck_info_delete(GtXRFCheckInfo *xci)
{
  if (!xci) return;
  gt_option_delete(xci->xrfcheck_option);
  gt_str_delete(xci->xrfcheck);
  gt_free(xci);
}

Exemple #6

Fichier : typecheck_info.c Projet : AnnSeidel/genometools

void gt_typecheck_info_delete(GtTypecheckInfo *tci)
{
  if (!tci) return;
  gt_option_delete(tci->typecheck_option);
  gt_str_delete(tci->typecheck);
  gt_free(tci);
}

Exemple #7

Fichier : gt_tir.c Projet : oeigenbrod/genometools

static void gt_tir_arguments_delete(void *tool_arguments)
{
  GtTirArguments *arguments = tool_arguments;
  if (!arguments) return;
  gt_str_delete(arguments->str_indexname);
  gt_str_delete(arguments->str_overlaps);
  gt_option_delete(arguments->optionoverlaps);
  gt_free(arguments);
}

Exemple #8

Fichier : gt_readjoiner_assembly.c Projet : AnnSeidel/genometools

static void gt_readjoiner_assembly_arguments_delete(void *tool_arguments)
{
  GtReadjoinerAssemblyArguments *arguments = tool_arguments;
  if (!arguments)
    return;
  gt_str_delete(arguments->readset);
  gt_str_delete(arguments->buffersizearg);
  gt_option_delete(arguments->refoptionbuffersize);
  gt_free(arguments);
}

Exemple #9

Fichier : gt_condenseq_extract.c Projet : PlantandFoodResearch/genometools

static void gt_condenseq_extract_arguments_delete(void *tool_arguments)
{
  GtCondenserExtractArguments *arguments = tool_arguments;
  if (arguments != NULL) {
    gt_file_delete(arguments->outfp);
    gt_output_file_info_delete(arguments->ofi);
    gt_str_delete(arguments->mode);
    gt_str_delete(arguments->sepchar);
    gt_option_delete(arguments->sepchar_opt);
    gt_free(arguments);
  }
}

Exemple #10

Fichier : gt_repfind.c Projet : lparsons/genometools

static void gt_repfind_arguments_delete(void *tool_arguments)
{
  Maxpairsoptions *arguments = tool_arguments;

  if (!arguments)
  {
    return;
  }
  gt_str_delete(arguments->indexname);
  gt_str_array_delete(arguments->queryfiles);
  gt_option_delete(arguments->refforwardoption);
  gt_free(arguments);
}

Exemple #11

Fichier : gt_genomediff.c Projet : potter-s/genometools

static void gt_genomediff_arguments_delete(void *tool_arguments)
{
    GtGenomediffArguments *arguments = tool_arguments;
    if (!arguments) return;
    gt_str_delete(arguments->indexname);
    gt_str_delete(arguments->unitfile);
    gt_str_delete(arguments->indextype);
    gt_str_array_delete(arguments->filenames);
    gt_option_delete(arguments->ref_unitfile);
    gt_encseq_options_delete(arguments->loadopts);
    gt_index_options_delete(arguments->idxopts);
    gt_free(arguments);
}

Exemple #12

static void gt_tyr_mkindex_arguments_delete(void *tool_arguments)
{
  Tyr_mkindex_options *arguments = tool_arguments;

  if (!arguments)
  {
    return;
  }
  gt_str_delete(arguments->str_storeindex);
  gt_str_delete(arguments->str_inputindex);
  gt_option_delete(arguments->refoptionpl);
  gt_free(arguments);
}

Exemple #13

static void gt_tyr_occratio_arguments_delete(void *tool_arguments)
{
  Tyr_occratio_options *arguments = tool_arguments;

  if (!arguments)
  {
    return;
  }
  gt_str_array_delete(arguments->mersizesstrings);
  gt_str_array_delete(arguments->outputspec);
  gt_str_delete(arguments->str_inputindex);
  gt_option_delete(arguments->refoptionmersizes);
  gt_free(arguments->outputvector);
  gt_free(arguments);
}