static int gCmpTrackHierarchy(const void *va, const void *vb)
/* Compare tracks based on longLabel. */
{
const struct slRef *aa = *((struct slRef **)va);
const struct slRef *bb = *((struct slRef **)vb);
const struct track *a = ((struct track *) aa->val);
const struct track *b = ((struct track *) bb->val);
     if ( tdbIsFolder(a->tdb) && !tdbIsFolder(b->tdb))
        return -1;
else if (!tdbIsFolder(a->tdb) &&  tdbIsFolder(b->tdb))
        return 1;
     if ( tdbIsContainer(a->tdb) && !tdbIsContainer(b->tdb))
        return -1;
else if (!tdbIsContainer(a->tdb) &&  tdbIsContainer(b->tdb))
        return 1;
     if (!tdbIsContainerChild(a->tdb) &&  tdbIsContainerChild(b->tdb))
        return -1;
else if ( tdbIsContainerChild(a->tdb) && !tdbIsContainerChild(b->tdb))
        return 1;
return strcasecmp(a->longLabel, b->longLabel);
}
static void displayFoundTracks(struct cart *cart, struct slRef *tracks, int tracksFound,enum sortBy sortBy)
// Routine for displaying found tracks
{
hPrintf("<div id='found' style='display:none;'>\n"); // This div allows the clear button to empty it
if(tracksFound < 1)
    {
    hPrintf("<p>No tracks found</p>\n");
    }
else
    {
    struct hash *tdbHash = makeTrackHash(database, chromName);
    hPrintf("<form action='%s' name='%s' id='%s' method='post'>\n\n", hgTracksName(),SEARCH_RESULTS_FORM,SEARCH_RESULTS_FORM);
    cartSaveSession(cart);  // Creates hidden var of hgsid to avoid bad voodoo

    int startFrom = 0;
    hPrintf("<table id='foundTracks'>\n");

    // Opening view in browser button and foundTracks count
    #define ENOUGH_FOUND_TRACKS 10
    if(tracksFound >= ENOUGH_FOUND_TRACKS)
        {
        hPrintf("<tr><td nowrap colspan=3>\n");
        hPrintf("<INPUT TYPE=SUBMIT NAME='submit' VALUE='return to browser' class='viewBtn' style='font-size:.8em;'>");
        hPrintf("&nbsp;&nbsp;&nbsp;&nbsp;<FONT class='selCbCount'></font>\n");

        startFrom = cartUsualInt(cart,TRACK_SEARCH_PAGER,0);
        if (startFrom > 0 && startFrom < tracksFound)
            {
            int countUp = 0;
            for(countUp=0; countUp < startFrom;countUp++)
                {
                if (slPopHead(&tracks) == NULL) // memory waste
                    break;
                }
            }
        hPrintf("</td><td align='right' valign='bottom'>\n");
        findTracksPageLinks(tracksFound,startFrom);
        hPrintf("</td></tr>\n");
        }

    // Begin foundTracks table
    //hPrintf("<table id='foundTracks'><tr><td colspan='2'>\n");
    hPrintf("<tr><td colspan='2'>\n");
    hPrintf("</td><td align='right'>\n");
    #define PM_BUTTON "<IMG height=18 width=18 onclick=\"return findTracksCheckAllWithWait(%s);\" id='btn_%s' src='../images/%s' title='%s all found tracks'>"
    hPrintf("</td></tr><tr bgcolor='#%s'><td>",HG_COL_HEADER);
    hPrintf(PM_BUTTON,"true",  "plus_all",   "add_sm.gif",  "Select");
    hPrintf(PM_BUTTON,"false","minus_all","remove_sm.gif","Unselect");
    hPrintf("</td><td><b>Visibility</b></td><td colspan=2>&nbsp;&nbsp;<b>Track Name</b>\n");

    // Sort options?
    if(tracksFound >= ENOUGH_FOUND_TRACKS)
        {
        hPrintf("<span style='float:right;'>Sort:");
        cgiMakeOnClickRadioButton(TRACK_SEARCH_SORT, "0", (sortBy == sbRelevance),"onchange=\"findTracksSortNow(this);\"");
        hPrintf("by Relevance");
        cgiMakeOnClickRadioButton(TRACK_SEARCH_SORT, "1", (sortBy == sbAbc),      "onchange=\"findTracksSortNow(this);\"");
        hPrintf("Alphabetically");
        cgiMakeOnClickRadioButton(TRACK_SEARCH_SORT, "2",(sortBy == sbHierarchy), "onchange=\"findTracksSortNow(this);\"");
        hPrintf("by Hierarchy&nbsp;&nbsp;</span>\n");
        }
    hPrintf("</td></tr>\n");

    // Set up json for js functionality
    struct dyString *jsonTdbVars = NULL;

    int trackCount=0;
    boolean containerTrackCount = 0;
    struct slRef *ptr;
    while((ptr = slPopHead(&tracks)))
        {
        if(++trackCount > MAX_FOUND_TRACKS)
            break;

        struct track *track = (struct track *) ptr->val;
        jsonTdbSettingsBuild(&jsonTdbVars, track, FALSE); // FALSE: No configuration from track search

        if (tdbIsFolder(track->tdb)) // supertrack
            hPrintf("<tr bgcolor='%s' valign='top' class='found'>\n","#EED5B7");//"#DEB887");//"#E6B426");//#FCECC0//COLOR_LTGREY);//COLOR_LTGREEN);//COLOR_TRACKLIST_LEVEL1);
        else if (tdbIsContainer(track->tdb))
            hPrintf("<tr bgcolor='%s' valign='top' class='found'>\n",COLOR_TRACKLIST_LEVEL3);
        else
            hPrintf("<tr bgcolor='%s' valign='top' class='found'>\n",COLOR_TRACKLIST_LEVEL2);

        hPrintf("<td align='center'>\n");

        // Determine visibility and checked state
        track->visibility = tdbVisLimitedByAncestors(cart, track->tdb, TRUE, TRUE);
        boolean checked = ( track->visibility != tvHide );
        if(tdbIsContainerChild(track->tdb))
            {
            checked = fourStateVisible(subtrackFourStateChecked(track->tdb,cart)); // Don't need all 4 states here.  Visible=checked&&enabled
            checked = (checked && ( track->visibility != tvHide )); // Checked is only if subtrack level vis is also set!
            }

        // Setup the check box
        #define CB_HIDDEN_VAR "<INPUT TYPE=HIDDEN disabled=true NAME='%s_sel' VALUE='%s'>"
        if (tdbIsContainerChild(track->tdb) || tdbIsFolderContent(track->tdb))  // subtracks and folder children get "_sel" var.  ("_sel" var is temporary on folder children)
            hPrintf(CB_HIDDEN_VAR,track->track,checked?"1":CART_VAR_EMPTY);
        #define CB_SEEN "<INPUT TYPE=CHECKBOX id='%s_sel_id' VALUE='on' class='selCb' onclick='findTracksClickedOne(this,true);'%s>"
        hPrintf(CB_SEEN,track->track,(checked?" CHECKED":""));
        hPrintf("</td><td>\n");

        // Setup the visibility drop down
        #define VIS_HIDDEN_VAR "<INPUT TYPE=HIDDEN disabled=true NAME='%s' VALUE='%s'>"
        hPrintf(VIS_HIDDEN_VAR,track->track,CART_VAR_EMPTY); // All tracks get vis hidden var
        char extra[512];
        if (tdbIsFolder(track->tdb))
            {
            safef(extra,sizeof(extra),"id='%s_id' onchange='findTracksChangeVis(this)'",track->track);
            hideShowDropDownWithClassAndExtra(track->track, (track->visibility != tvHide), "normalText visDD",extra);
            }
        else
            {
            safef(extra,sizeof(extra),"id='%s_id' onchange='findTracksChangeVis(this)'",track->track);
            hTvDropDownClassWithJavascript(NULL, track->visibility,track->canPack,"normalText seenVis",extra);
            }

        // If this is a container track, allow configuring...
        if (tdbIsContainer(track->tdb) || tdbIsFolder(track->tdb))
            {
            containerTrackCount++;
            hPrintf("&nbsp;<a href='hgTrackUi?db=%s&g=%s&%s=Search' title='Configure this container track...'><IMG SRC='../images/folderWrench.png'></a>&nbsp;",database,track->track,TRACK_SEARCH);
            }
        hPrintf("</td>\n");

        // shortLabel has description popup and longLabel has "..." metadata
        hPrintf("<td><a target='_top' onclick=\"hgTrackUiPopUp('%s',true); return false;\" href='%s' title='Display track details'>%s</a></td>\n", track->track, trackUrl(track->track, NULL), track->shortLabel);
        hPrintf("<td>%s", track->longLabel);
        compositeMetadataToggle(database, track->tdb, "...", TRUE, FALSE, tdbHash);
        hPrintf("</td></tr>\n");
        }
    //hPrintf("</table>\n");

    // Closing view in browser button and foundTracks count
    hPrintf("<tr><td nowrap colspan=3>");
    hPrintf("<INPUT TYPE=SUBMIT NAME='submit' VALUE='Return to Browser' class='viewBtn' style='font-size:.8em;'>");
    hPrintf("&nbsp;&nbsp;&nbsp;&nbsp;<FONT class='selCbCount'></font>");
    if(tracksFound >= ENOUGH_FOUND_TRACKS)
        {
        hPrintf("</td><td align='right' valign='top'>\n");
        findTracksPageLinks(tracksFound,startFrom);
        hPrintf("</td></tr>\n");
        }
    hPrintf("</table>\n");

    if(containerTrackCount > 0)
        hPrintf("<BR><IMG SRC='../images/folderWrench.png'>&nbsp;Tracks so marked are containers which group related data tracks.  Containers may need additional configuration (by clicking on the <IMG SRC='../images/folderWrench.png'> icon) before they can be viewed in the browser.<BR>\n");
        //hPrintf("* Tracks so marked are containers which group related data tracks.  These may not be visible unless further configuration is done.  Click on the * to configure these.<BR><BR>\n");
    hPrintf("\n</form>\n");

    // be done with json
    hWrites(jsonTdbSettingsUse(&jsonTdbVars));
    }
#ifdef OMIT
if(!doSearch)
    {
    hPrintf("<p><b>Recently Done</b><ul>\n"
        "<li>Can now page through found tracks 100 at a time.</li>"
        "<li>Added <IMG SRC='../images/folderWrench.png'> icon for contqainers with a configuration link.  Is this okay?</li>"
        "<li>SuperTracks can now be found.</li>"
        "<li>Configuration of superTrack children's vis should result in proper superTrack reshaping. (This is really an hgTrackUi feature.)</li>"
        "<li>Added sort toggle: Relevance, Alphabetically or by Hierarchy.</li>"
        "<li>Composite/view visibilites in hgTrackUi get reshaped to reflect found/selected subtracks.  (In demo1: only default state composites; demo2: all composites.)</li>"
        "<li>Non-data 'container' tracks (composites and supertracks) have '*' to mark them, and can be configured before displaying.  Better suggestions?</li>"
        "</ul></p>"
        "<p><b>Suggested improvments:</b><ul>\n"
        "<li>The metadata values will not be white-listed, but it would be nice to have more descriptive text for them.  A short label added to cv.ra?</li>"
        "<li>Look and feel of found track list (here) and composite subtrack list (hgTrackUi) should converge.  Jim suggests look and feel of hgTracks 'Configure Tracks...' list instead.</li>"
        "<li>Drop-down list of terms (cells, antibodies, etc.) should be multi-select with checkBoxes as seen in filterComposites. Perhaps saved for v2.0.</li>"
        "</ul></p>\n");
    }
#endif///def OMIT
hPrintf("</div>"); // This div allows the clear button to empty it
}
Exemple #3
0
static void displayFoundTracks(struct cart *cart, struct slRef *tracks, int tracksFound,
                               enum sortBy sortBy)
// Routine for displaying found tracks
{
hPrintf("<div id='found' style='display:none;'>\n"); // This div is emptied with 'clear' button
if (tracksFound < 1)
    {
    hPrintf("<p>No tracks found</p>\n");
    }
else
    {
    hPrintf("<form action='%s' name='%s' id='%s' method='post'>\n\n",
            hgTracksName(),SEARCH_RESULTS_FORM,SEARCH_RESULTS_FORM);
    cartSaveSession(cart);  // Creates hidden var of hgsid to avoid bad voodoo

    int startFrom = 0;
    hPrintf("<table id='foundTracks'>\n");

    // Opening view in browser button and foundTracks count
    #define ENOUGH_FOUND_TRACKS 10
    if (tracksFound >= ENOUGH_FOUND_TRACKS)
        {
        hPrintf("<tr><td nowrap colspan=3>\n");
        hPrintf("<INPUT TYPE=SUBMIT NAME='submit' VALUE='return to browser' class='viewBtn' "
                "style='font-size:.8em;'>");
        hPrintf("&nbsp;&nbsp;&nbsp;&nbsp;<span class='selCbCount'></span>\n");

        startFrom = cartUsualInt(cart,TRACK_SEARCH_PAGER,0);
        if (startFrom > 0 && startFrom < tracksFound)
            {
            int countUp = 0;
            for (countUp=0; countUp < startFrom;countUp++)
                {
                if (slPopHead(&tracks) == NULL) // memory waste
                    break;
                }
            }
        hPrintf("</td><td align='right' valign='bottom'>\n");
        findTracksPageLinks(tracksFound,startFrom);
        hPrintf("</td></tr>\n");
        }

    // Begin foundTracks table
    //hPrintf("<table id='foundTracks'><tr><td colspan='2'>\n");
    hPrintf("<tr><td colspan='2'>\n");
    hPrintf("</td><td align='right'>\n");
    hPrintf("</td></tr><tr bgcolor='#%s'><td>",HG_COL_HEADER);
    #define PM_BUTTON \
            "<IMG height=18 width=18 onclick=\"return findTracks.checkAllWithWait(%s);\" " \
            "id='btn_%s' src='../images/%s' title='%s all found tracks'>"
    hPrintf(PM_BUTTON,"true",  "plus_all",   "add_sm.gif",  "Select");
    hPrintf(PM_BUTTON,"false","minus_all","remove_sm.gif","Unselect");
    hPrintf("</td><td><b>Visibility</b></td><td colspan=2>&nbsp;&nbsp;<b>Track Name</b>\n");

    // Sort options?
    if (tracksFound >= ENOUGH_FOUND_TRACKS)
        {
        hPrintf("<span style='float:right;'>Sort:");
        cgiMakeOnClickRadioButton(TRACK_SEARCH_SORT, "0", (sortBy == sbRelevance),
                                  "onclick=\"findTracks.sortNow(this);\"");
        hPrintf("by Relevance");
        cgiMakeOnClickRadioButton(TRACK_SEARCH_SORT, "1", (sortBy == sbAbc),
                                  "onclick=\"findTracks.sortNow(this);\"");
        hPrintf("Alphabetically");
        cgiMakeOnClickRadioButton(TRACK_SEARCH_SORT, "2",(sortBy == sbHierarchy),
                                  "onclick=\"findTracks.sortNow(this);\"");
        hPrintf("by Hierarchy&nbsp;&nbsp;</span>\n");
        }
    hPrintf("</td></tr>\n");

    // Set up json for js functionality
    struct jsonElement *jsonTdbVars = newJsonObject(newHash(8));

    int trackCount=0;
    boolean containerTrackCount = 0;
    struct slRef *ptr;
    while((ptr = slPopHead(&tracks)))
        {
        if (++trackCount > MAX_FOUND_TRACKS)
            break;

        struct track *track = (struct track *) ptr->val;
        jsonTdbSettingsBuild(jsonTdbVars, track, FALSE); // FALSE: No config from track search

        if (tdbIsFolder(track->tdb)) // supertrack
            hPrintf("<tr class='bgLevel4' valign='top' class='found'>\n");
        else if (tdbIsContainer(track->tdb))
            hPrintf("<tr class='bgLevel3' valign='top' class='found'>\n");
        else
            hPrintf("<tr class='bgLevel2' valign='top' class='found'>\n");

        hPrintf("<td align='center'>\n");

        // Determine visibility and checked state
        track->visibility = tdbVisLimitedByAncestors(cart, track->tdb, TRUE, TRUE);
        boolean checked = ( track->visibility != tvHide );
        if (tdbIsContainerChild(track->tdb))
            {
            // Don't need all 4 states here.  Visible=checked&&enabled
            checked = fourStateVisible(subtrackFourStateChecked(track->tdb,cart));
            // Checked is only if subtrack level vis is also set!
            checked = (checked && ( track->visibility != tvHide ));
            }

        // Setup the check box
        #define CB_HIDDEN_VAR "<INPUT TYPE=HIDDEN disabled=true NAME='%s_sel' VALUE='%s'>"
        // subtracks and folder children get "_sel" var. ("_sel" var is temp on folder children)
        if (tdbIsContainerChild(track->tdb) || tdbIsFolderContent(track->tdb))
            hPrintf(CB_HIDDEN_VAR,track->track,checked?"1":CART_VAR_EMPTY);
        #define CB_SEEN "<INPUT TYPE=CHECKBOX id='%s_sel_id' VALUE='on' class='selCb' " \
                        "onclick='findTracks.clickedOne(this,true);'%s>"
        hPrintf(CB_SEEN,track->track,(checked?" CHECKED":""));
        hPrintf("</td><td>\n");

        // Setup the visibility drop down
        #define VIS_HIDDEN_VAR "<INPUT TYPE=HIDDEN disabled=true NAME='%s' VALUE='%s'>"
        hPrintf(VIS_HIDDEN_VAR,track->track,CART_VAR_EMPTY); // All tracks get vis hidden var
        char extra[512];
        if (tdbIsFolder(track->tdb))
            {
            safef(extra,sizeof(extra),"id='%s_id' onchange='findTracks.changeVis(this)'",
                  track->track);
            hideShowDropDownWithClassAndExtra(track->track, (track->visibility != tvHide),
                                              "normalText visDD",extra);
            }
        else
            {
            safef(extra,sizeof(extra),"id='%s_id' onchange='findTracks.changeVis(this)'",
                  track->track);
            hTvDropDownClassWithJavascript(NULL, track->visibility,track->canPack,
                                           "normalText seenVis",extra);
            }

        // If this is a container track, allow configuring...
        if (tdbIsContainer(track->tdb) || tdbIsFolder(track->tdb))
            {
            containerTrackCount++; // Using onclick ensures return to search tracks on submit
            hPrintf("&nbsp;<IMG SRC='../images/folderWrench.png' style='cursor:pointer;' "
                    "title='Configure this track container...' "
                    "onclick='findTracks.configSet(\"%s\");'>&nbsp;", track->track);
            }
//#define SHOW_PARENT_FOLDER
#ifdef SHOW_PARENT_FOLDER
        else if (tdbIsContainerChild(track->tdb) || tdbIsFolderContent(track->tdb))
            {
            struct trackDb *parentTdb =
                            tdbIsContainerChild(track->tdb) ? tdbGetContainer(track->tdb)
                                                            : tdbGetImmediateFolder(track->tdb);
            if (parentTdb != NULL) // Using href will not return to search tracks on submit
                hPrintf("&nbsp;<A HREF='../cgi-bin/hgTrackUi?g=%s'><IMG SRC='../images/folderC.png'"
                        " title='Navigate to parent container...'></A>&nbsp;", parentTdb->track);
            }
#endif///def SHOW_PARENT_FOLDER
        hPrintf("</td>\n");

        // shortLabel has description popup and longLabel has "..." metadata
        hPrintf("<td><a target='_top' onclick=\"popUp.hgTrackUi('%s',true); return false;\" "
                "href='%s' title='Display track details'>%s</a></td>\n",
                track->track, trackUrl(track->track, NULL), track->shortLabel);
        hPrintf("<td>%s", track->longLabel);
        compositeMetadataToggle(database, track->tdb, NULL, TRUE, FALSE);
        hPrintf("</td></tr>\n");
        }
    //hPrintf("</table>\n");

    // Closing view in browser button and foundTracks count
    hPrintf("<tr><td nowrap colspan=3>");
    hPrintf("<INPUT TYPE=SUBMIT NAME='submit' VALUE='Return to Browser' class='viewBtn' "
            "style='font-size:.8em;'>");
    hPrintf("&nbsp;&nbsp;&nbsp;&nbsp;<span class='selCbCount'></span>");
    if (tracksFound >= ENOUGH_FOUND_TRACKS)
        {
        hPrintf("</td><td align='right' valign='top'>\n");
        findTracksPageLinks(tracksFound,startFrom);
        hPrintf("</td></tr>\n");
        }
    hPrintf("</table>\n");

    if (containerTrackCount > 0)
        hPrintf("<BR><IMG SRC='../images/folderWrench.png'>&nbsp;Tracks so marked are containers "
                "which group related data tracks.  Containers may need additional configuration "
                "(by clicking on the <IMG SRC='../images/folderWrench.png'> icon) before they can "
                "be viewed in the browser.<BR>\n");
        //hPrintf("* Tracks so marked are containers which group related data tracks.  These may "
        //        "not be visible unless further configuration is done.  Click on the * to "
        //        "configure these.<BR><BR>\n");
    hPrintf("\n</form>\n");

    // be done with json
    jsonTdbSettingsUse(jsonTdbVars);
    }
hPrintf("</div>"); // This div allows the clear button to empty it
}