// -----------------------------------------------------------------------------
//
// -----------------------------------------------------------------------------
DataContainerArrayProxy::DataContainerArrayProxy(DataContainerArray* dca)
{
if(NULL == dca)
{
return;
}
QList<DataContainer::Pointer> containers = dca->getDataContainers();
for(int i = 0; i < containers.size(); i++) // Loop on each Data Container
{
DataContainer::Pointer container = containers.at(i);
DataContainerProxy dcProxy(container->getName(), Qt::Checked); // Create a new DataContainerProxy
// Now loop over each AttributeMatrix in the data container that was selected
DataContainer::AttributeMatrixMap_t attrMats = container->getAttributeMatrices();
QMapIterator<QString, AttributeMatrix::Pointer> iter(attrMats);
while(iter.hasNext())
{
iter.next();
QString amName = iter.key();
AttributeMatrix::Pointer attrMat = iter.value();
AttributeMatrixProxy amProxy(amName, Qt::Checked, attrMat->getType());
QList<QString> attrArrayNames = attrMat->getAttributeArrayNames();
QListIterator<QString> attrArrayNamesIter(attrArrayNames);
while(attrArrayNamesIter.hasNext())
{
QString aaName = attrArrayNamesIter.next();
QString daPath = container->getName() + "/" + amName + "/";
IDataArray::Pointer attrArray = attrMat->getAttributeArray(aaName);
DataArrayProxy daProxy(daPath, aaName, Qt::Checked, attrArray->getTypeAsString(), attrArray->getClassVersion() );
amProxy.dataArrays.insert(aaName, daProxy);
}
dcProxy.attributeMatricies.insert(amName, amProxy); // Add the new AttributeMatrix to the DataContainerProxy
}
dataContainers.insert(dcProxy.name, dcProxy);
}
}
// -----------------------------------------------------------------------------
//
// -----------------------------------------------------------------------------
void LinkFieldMapToCellArray::dataCheck(bool preflight, size_t voxels, size_t fields, size_t ensembles)
{
setErrorCondition(0);
std::stringstream ss;
VoxelDataContainer* m = getVoxelDataContainer();
IDataArray::Pointer data = m->getCellData(m_SelectedCellDataArrayName);
if (NULL == data.get())
{
ss.str("");
ss << "Selected array '" << m_SelectedCellDataArrayName << "' does not exist in the Voxel Data Container. Was it spelled correctly?";
setErrorCondition(-11001);
addErrorMessage(getHumanLabel(),ss.str(),getErrorCondition());
return;
}
std::string dType = data->getTypeAsString();
IDataArray::Pointer p = IDataArray::NullPointer();
if (dType.compare("int32_t") == 0)
{
DataArray<int32_t>* field = DataArray<int32_t>::SafePointerDownCast(data.get());
m_SelectedCellData = field->GetPointer(0);
}
else
{
ss.str("");
ss << "Selected array '" << m_SelectedCellDataArrayName << "' is not an Integer array. Is this the array you want to use?";
setErrorCondition(-11001);
addErrorMessage(getHumanLabel(),ss.str(),getErrorCondition());
return;
}
m->clearFieldData();
BoolArrayType::Pointer active = BoolArrayType::CreateArray(fields, 1, DREAM3D::FieldData::Active);
// bool* mActive = m_Active->GetPointer(0);
m->addFieldData(DREAM3D::FieldData::Active, active);
}
// -----------------------------------------------------------------------------
//
// -----------------------------------------------------------------------------
bool AttributeMatrix::removeInactiveObjects(QVector<bool> activeObjects, Int32ArrayType::Pointer Ids)
{
bool acceptableMatrix = false;
//Only valid for feature or ensemble type matrices
if(m_Type == DREAM3D::AttributeMatrixType::VertexFeature || m_Type == DREAM3D::AttributeMatrixType::VertexEnsemble ||
m_Type == DREAM3D::AttributeMatrixType::EdgeFeature || m_Type == DREAM3D::AttributeMatrixType::EdgeEnsemble ||
m_Type == DREAM3D::AttributeMatrixType::FaceFeature || m_Type == DREAM3D::AttributeMatrixType::FaceEnsemble ||
m_Type == DREAM3D::AttributeMatrixType::CellFeature || m_Type == DREAM3D::AttributeMatrixType::CellEnsemble)
{
acceptableMatrix = true;
}
size_t totalTuples = getNumTuples();
if( static_cast<size_t>(activeObjects.size()) == totalTuples && acceptableMatrix == true)
{
size_t goodcount = 1;
QVector<size_t> NewNames(totalTuples, 0);
QVector<size_t> RemoveList;
for(qint32 i = 1; i < activeObjects.size(); i++)
{
if(activeObjects[i] == false)
{
RemoveList.push_back(i);
NewNames[i] = 0;
}
else
{
NewNames[i] = goodcount;
goodcount++;
}
}
if(RemoveList.size() > 0)
{
QList<QString> headers = getAttributeArrayNames();
for (QList<QString>::iterator iter = headers.begin(); iter != headers.end(); ++iter)
{
IDataArray::Pointer p = getAttributeArray(*iter);
QString type = p->getTypeAsString();
if(type.compare("NeighborList<T>") == 0)
{
removeAttributeArray(*iter);
}
else
{
p->eraseTuples(RemoveList);
}
}
QVector<size_t> tDims(1, (totalTuples - RemoveList.size()));
setTupleDimensions(tDims);
// Loop over all the points and correct all the feature names
size_t totalPoints = Ids->getNumberOfTuples();
int32_t* id = Ids->getPointer(0);
for (size_t i = 0; i < totalPoints; i++)
{
if(id[i] >= 0 && id[i] < NewNames.size())
{
id[i] = static_cast<int32_t>( NewNames[id[i]] );
}
}
}
}
else
{
return false;
}
return true;
}
// -----------------------------------------------------------------------------
//
// -----------------------------------------------------------------------------
int AttributeMatrix::addAttributeArray(const QString& name, IDataArray::Pointer data)
{
if (data->getName().compare(name) != 0)
{
qDebug() << "Adding Attribute Array with different array name than key name" << "\n";
qDebug() << "Key name: " << name << "\n";
qDebug() << "Array Name:" << data->getName() << "\n";
data->setName(name);
}
if(getNumTuples() != data->getNumberOfTuples())
{
qDebug() << "AttributeMatrix::Name: " << getName() << " dataArray::name: " << data->getName() << " Type: " << data->getTypeAsString();
qDebug() << "getNumTuples(): " << getNumTuples() << " data->getNumberOfTuples(): " << data->getNumberOfTuples();
}
Q_ASSERT(getNumTuples() == data->getNumberOfTuples());
m_AttributeArrays[name] = data;
return 0;
}
// -----------------------------------------------------------------------------
//
// -----------------------------------------------------------------------------
void FindFaceAverage::dataCheckSurfaceMesh(bool preflight, size_t voxels, size_t fields, size_t ensembles)
{
setErrorCondition(0);
std::stringstream ss;
SurfaceMeshDataContainer* sm = getSurfaceMeshDataContainer();
if(NULL == sm)
{
addErrorMessage(getHumanLabel(), "SurfaceMeshDataContainer is missing", -383);
setErrorCondition(-383);
}
else
{
// We MUST have Triangles defined.
if(sm->getFaces().get() == NULL)
{
addErrorMessage(getHumanLabel(), "SurfaceMesh DataContainer missing Triangles", -385);
setErrorCondition(-385);
}
else
{
GET_PREREQ_DATA(sm, DREAM3D, FaceData, SurfaceMeshGrainFaceId, ss, -387, int32_t, Int32ArrayType, fields, 1)
if(1==m_AverageMethod)
{
GET_PREREQ_DATA(sm, DREAM3D, FaceData, SurfaceMeshTriangleAreas, ss, -387, double, DoubleArrayType, fields, 1)
}
if(m_SelectedFaceArrayName.empty() == true)
{
setErrorCondition(-11000);
addErrorMessage(getHumanLabel(), "An array from the Face Data Container must be selected.", getErrorCondition());
}
else if(preflight)
{
IDataArray::Pointer inputData = sm->getFaceData(m_SelectedFaceArrayName);
if (NULL == inputData.get())
{
ss.str("");
ss << "Selected array '" << m_SelectedFaceArrayName << "' does not exist in the Surface Mesh Data Container. Was it spelled correctly?";
setErrorCondition(-11001);
notifyErrorMessage(ss.str(), getErrorCondition());
return;
}
int numberOfComponents = inputData->GetNumberOfComponents();
std::string dType = inputData->getTypeAsString();
IDataArray::Pointer p = IDataArray::NullPointer();
if (dType.compare("int8_t") == 0)
{
p = Int8ArrayType::CreateArray(1, numberOfComponents, m_SelectedFaceArrayName);
}
else if (dType.compare("uint8_t") == 0)
{
p = UInt8ArrayType::CreateArray(1, numberOfComponents, m_SelectedFaceArrayName);
}
else if (dType.compare("int16_t") == 0)
{
p = Int16ArrayType::CreateArray(1, numberOfComponents, m_SelectedFaceArrayName);
}
else if (dType.compare("uint16_t") == 0)
{
p = UInt16ArrayType::CreateArray(1, numberOfComponents, m_SelectedFaceArrayName);
}
else if (dType.compare("int32_t") == 0)
{
p = Int32ArrayType::CreateArray(1, numberOfComponents, m_SelectedFaceArrayName);
}
else if (dType.compare("uint32_t") == 0)
{
p = UInt32ArrayType::CreateArray(1, numberOfComponents, m_SelectedFaceArrayName);
}
else if (dType.compare("int64_t") == 0)
{
p = Int64ArrayType::CreateArray(1, numberOfComponents, m_SelectedFaceArrayName);
}
else if (dType.compare("uint64_t") == 0)
{
p = UInt64ArrayType::CreateArray(1, numberOfComponents, m_SelectedFaceArrayName);
}
else if (dType.compare("float") == 0)
{
p = FloatArrayType::CreateArray(1, numberOfComponents, m_SelectedFaceArrayName);
}
else if (dType.compare("double") == 0)
{
p = DoubleArrayType::CreateArray(1, numberOfComponents, m_SelectedFaceArrayName);
}
else if (dType.compare("bool") == 0)
{
p = BoolArrayType::CreateArray(1, numberOfComponents, m_SelectedFaceArrayName);
}
sm->addFieldData(p->GetName(), p);
}
}
}
// -----------------------------------------------------------------------------
//
// -----------------------------------------------------------------------------
int VoxelDataContainerWriter::writeFieldData(hid_t dcGid)
{
std::stringstream ss;
int err = 0;
VoxelDataContainer* m = getVoxelDataContainer();
#if WRITE_FIELD_XDMF
// Get the name of the .dream3d file that we are writing to:
ssize_t nameSize = H5Fget_name(m_HdfFileId, NULL, 0) + 1;
std::vector<char> nameBuffer(nameSize, 0);
nameSize = H5Fget_name(m_HdfFileId, &(nameBuffer.front()), nameSize);
std::string hdfFileName(&(nameBuffer.front()), nameSize);
hdfFileName = MXAFileInfo::filename(hdfFileName);
std::string xdmfGroupPath = std::string(":/") + VoxelDataContainer::ClassName() + std::string("/") + H5_FIELD_DATA_GROUP_NAME;
#endif
int64_t volDims[3] = { 0,0,0 };
// Write the Field Data
err = H5Utilities::createGroupsFromPath(H5_FIELD_DATA_GROUP_NAME, dcGid);
if(err < 0)
{
std::cout << "Error creating HDF Group " << H5_FIELD_DATA_GROUP_NAME << std::endl;
return err;
}
err = H5Lite::writeStringAttribute(dcGid, H5_FIELD_DATA_GROUP_NAME, H5_NAME, H5_FIELD_DATA_DEFAULT);
if(err < 0)
{
return err;
}
hid_t fieldGroupId = H5Gopen(dcGid, H5_FIELD_DATA_GROUP_NAME, H5P_DEFAULT);
if(err < 0)
{
ss.str("");
ss << "Error opening field Group " << H5_FIELD_DATA_GROUP_NAME << std::endl;
setErrorCondition(-65);
notifyErrorMessage( ss.str(), err);
H5Gclose(dcGid); // Close the Data Container Group
return err;
}
size_t total = 0;
typedef std::vector<IDataArray*> VectorOfIDataArrays_t;
VectorOfIDataArrays_t neighborListArrays;
NameListType names = m->getFieldArrayNameList();
if (names.size() > 0)
{
IDataArray::Pointer array = m->getFieldData(names.front());
total = array->GetSize();
volDims[0] = total;
volDims[1] = 1;
volDims[2] = 1;
#if WRITE_FIELD_XDMF
ss.str("");
ss << "Field Data (" << total << ")";
writeFieldXdmfGridHeader(total, ss.str());
#endif
}
// Now loop over all the field data and write it out, possibly wrapping it with XDMF code also.
for (NameListType::iterator iter = names.begin(); iter != names.end(); ++iter)
{
IDataArray::Pointer array = m->getFieldData(*iter);
if (array->getTypeAsString().compare(NeighborList<int>::ClassName()) == 0)
{
neighborListArrays.push_back(array.get());
}
else if (NULL != array.get())
{
err = array->writeH5Data(fieldGroupId);
if(err < 0)
{
ss.str("");
ss << "Error writing field array '" << (*iter).c_str() << "' to the HDF5 File";
notifyErrorMessage( ss.str(), err);
setErrorCondition(err);
H5Gclose(fieldGroupId); // Close the Cell Group
H5Gclose(dcGid); // Close the Data Container Group
return err;
}
#if WRITE_FIELD_XDMF
array->writeXdmfAttribute( *m_XdmfPtr, volDims, hdfFileName, xdmfGroupPath, " (Field)");
#endif
}
}
#if WRITE_FIELD_XDMF
if (names.size() > 0)
{
writeXdmfGridFooter("Field Data");
}
#endif
// Write the NeighborLists onto their own grid
// We need to determine how many total elements we are going to end up with and group the arrays by
// those totals so we can minimize the number of grids
typedef std::map<size_t, VectorOfIDataArrays_t> SizeToIDataArrays_t;
SizeToIDataArrays_t sizeToDataArrays;
for(VectorOfIDataArrays_t::iterator iter = neighborListArrays.begin(); iter < neighborListArrays.end(); ++iter)
{
IDataArray* array = (*iter);
sizeToDataArrays[array->GetSize()].push_back(array);
}
// Now loop over each pair in the map creating a section in the XDMF and also writing the data to the HDF5 file
for(SizeToIDataArrays_t::iterator pair = sizeToDataArrays.begin(); pair != sizeToDataArrays.end(); ++pair)
{
total = (*pair).first;
VectorOfIDataArrays_t& arrays = (*pair).second;
volDims[0] = total;
volDims[1] = 1;
volDims[2] = 1;
#if WRITE_FIELD_XDMF
ss.str("");
ss << "Neighbor Data (" << total << ")";
writeFieldXdmfGridHeader(total, ss.str());
#endif
for(VectorOfIDataArrays_t::iterator iter = arrays.begin(); iter < arrays.end(); ++iter)
{
err = (*iter)->writeH5Data(fieldGroupId);
if(err < 0)
{
ss.str("");
ss << "Error writing neighbor list field array '" << (*iter)->GetName() << "' to the HDF5 File";
notifyErrorMessage( ss.str(), err);
setErrorCondition(err);
H5Gclose(fieldGroupId); // Close the Cell Group
H5Gclose(dcGid); // Close the Data Container Group
return err;
}
#if WRITE_FIELD_XDMF
(*iter)->writeXdmfAttribute( *m_XdmfPtr, volDims, hdfFileName, xdmfGroupPath, " (Neighbor Data)");
#endif
}
#if WRITE_FIELD_XDMF
writeXdmfGridFooter(ss.str());
#endif
}
H5Gclose(fieldGroupId);
return err;
}
// -----------------------------------------------------------------------------
//
// -----------------------------------------------------------------------------
void InitializeData::execute()
{
setErrorCondition(0);
dataCheck();
if(getErrorCondition() < 0) { return; }
DataArrayPath attributeMatrixPath(m_CellAttributeMatrixPaths[0].getDataContainerName(), m_CellAttributeMatrixPaths[0].getAttributeMatrixName(), "");
DataContainer::Pointer m = getDataContainerArray()->getDataContainer(attributeMatrixPath.getDataContainerName());
size_t udims[3] =
{ 0, 0, 0 };
m->getGeometryAs<ImageGeom>()->getDimensions(udims);
int64_t dims[3] =
{ static_cast<int64_t>(udims[0]), static_cast<int64_t>(udims[1]), static_cast<int64_t>(udims[2]), };
QString attrMatName = attributeMatrixPath.getAttributeMatrixName();
QList<QString> voxelArrayNames = DataArrayPath::GetDataArrayNames(m_CellAttributeMatrixPaths);
for (QList<QString>::iterator iter = voxelArrayNames.begin(); iter != voxelArrayNames.end(); ++iter)
{
IDataArray::Pointer p = m->getAttributeMatrix(attrMatName)->getAttributeArray(*iter);
QString type = p->getTypeAsString();
if (type == "int8_t")
{
initializeArrayWithInts<int8_t>(p, dims);
}
else if (type == "int16_t")
{
initializeArrayWithInts<int16_t>(p, dims);
}
else if (type == "int32_t")
{
initializeArrayWithInts<int32_t>(p, dims);
}
else if (type == "int64_t")
{
initializeArrayWithInts<int64_t>(p, dims);
}
else if (type == "uint8_t")
{
initializeArrayWithInts<uint8_t>(p, dims);
}
else if (type == "uint16_t")
{
initializeArrayWithInts<uint16_t>(p, dims);
}
else if (type == "uint32_t")
{
initializeArrayWithInts<uint32_t>(p, dims);
}
else if (type == "uint64_t")
{
initializeArrayWithInts<uint64_t>(p, dims);
}
else if (type == "float")
{
initializeArrayWithReals<float>(p, dims);
}
else if (type == "double")
{
initializeArrayWithReals<double>(p, dims);
}
delay(1); // Delay the execution by 1 second to avoid the exact same seedings for each array
}
notifyStatusMessage(getHumanLabel(), "Complete");
}
// -----------------------------------------------------------------------------
//
// -----------------------------------------------------------------------------
void InitializeData::dataCheck()
{
setErrorCondition(0);
if (m_CellAttributeMatrixPaths.size() <= 0)
{
QString ss = "At least one data array must be selected.";
setErrorCondition(-5550);
notifyErrorMessage(getHumanLabel(), ss, getErrorCondition());
return;
}
DataArrayPath attributeMatrixPath(m_CellAttributeMatrixPaths[0].getDataContainerName(), m_CellAttributeMatrixPaths[0].getAttributeMatrixName(), "");
getDataContainerArray()->getPrereqAttributeMatrixFromPath<AbstractFilter>(this, attributeMatrixPath, -301);
ImageGeom::Pointer image = getDataContainerArray()->getPrereqGeometryFromDataContainer<ImageGeom, AbstractFilter>(this, attributeMatrixPath.getDataContainerName());
if(NULL == image.get()) { return; }
if (getXMax() < getXMin())
{
QString ss = QObject::tr("X Max (%1) less than X Min (%2)").arg(getXMax()).arg(getXMin());
setErrorCondition(-5551);
notifyErrorMessage(getHumanLabel(), ss, getErrorCondition());
}
if (getYMax() < getYMin())
{
QString ss = QObject::tr("Y Max (%1) less than Y Min (%2)").arg(getYMax()).arg(getYMin());
setErrorCondition(-5552);
notifyErrorMessage(getHumanLabel(), ss, getErrorCondition());
}
if (getZMax() < getZMin())
{
QString ss = QObject::tr("Z Max (%1) less than Z Min (%2)").arg(getZMax()).arg(getZMin());
setErrorCondition(-5553);
notifyErrorMessage(getHumanLabel(), ss, getErrorCondition());
}
if (getXMin() < 0)
{
QString ss = QObject::tr("X Min (%1) less than 0").arg(getXMin());
setErrorCondition(-5554);
notifyErrorMessage(getHumanLabel(), ss, getErrorCondition());
}
if (getYMin() < 0)
{
QString ss = QObject::tr("Y Min (%1) less than 0").arg(getYMin());
setErrorCondition(-5555);
notifyErrorMessage(getHumanLabel(), ss, getErrorCondition());
}
if (getZMin() < 0)
{
QString ss = QObject::tr("Z Min (%1) less than 0").arg(getZMin());
setErrorCondition(-5556);
notifyErrorMessage(getHumanLabel(), ss, getErrorCondition());
}
if (getXMax() > (static_cast<int64_t>(image->getXPoints()) - 1))
{
QString ss = QObject::tr("The X Max you entered of %1 is greater than your Max X Point of %2").arg(getXMax()).arg(static_cast<int64_t>(image->getXPoints()) - 1);
setErrorCondition(-5557);
notifyErrorMessage(getHumanLabel(), ss, getErrorCondition());
}
if (getYMax() > (static_cast<int64_t>(image->getYPoints()) - 1))
{
QString ss = QObject::tr("The Y Max you entered of %1 is greater than your Max Y Point of %2").arg(getYMax()).arg(static_cast<int64_t>(image->getYPoints()) - 1);
setErrorCondition(-5558);
notifyErrorMessage(getHumanLabel(), ss, getErrorCondition());
}
if (getZMax() > (static_cast<int64_t>(image->getZPoints()) - 1))
{
QString ss = QObject::tr("The Z Max you entered of %1) greater than your Max Z Point of %2").arg(getZMax()).arg(static_cast<int64_t>(image->getZPoints()) - 1);
setErrorCondition(-5559);
notifyErrorMessage(getHumanLabel(), ss, getErrorCondition());
}
DataContainer::Pointer m = getDataContainerArray()->getDataContainer(attributeMatrixPath.getDataContainerName());
size_t udims[3] =
{ 0, 0, 0 };
m->getGeometryAs<ImageGeom>()->getDimensions(udims);
QString attrMatName = attributeMatrixPath.getAttributeMatrixName();
QList<QString> voxelArrayNames = DataArrayPath::GetDataArrayNames(m_CellAttributeMatrixPaths);
for (QList<QString>::iterator iter = voxelArrayNames.begin(); iter != voxelArrayNames.end(); ++iter)
{
IDataArray::Pointer p = m->getAttributeMatrix(attrMatName)->getAttributeArray(*iter);
QString type = p->getTypeAsString();
if (type == "int8_t")
{
checkInitialization<int8_t>(p);
}
else if (type == "int16_t")
{
checkInitialization<int16_t>(p);
}
else if (type == "int32_t")
{
checkInitialization<int32_t>(p);
}
else if (type == "int64_t")
{
checkInitialization<int64_t>(p);
}
else if (type == "uint8_t")
{
checkInitialization<uint8_t>(p);
}
else if (type == "uint16_t")
{
checkInitialization<uint16_t>(p);
}
else if (type == "uint32_t")
{
checkInitialization<uint32_t>(p);
}
else if (type == "uint64_t")
{
checkInitialization<uint64_t>(p);
}
else if (type == "float")
{
checkInitialization<float>(p);
}
else if (type == "double")
{
checkInitialization<double>(p);
}
if (getErrorCondition() < 0)
{
return;
}
}
}
// -----------------------------------------------------------------------------
//
// -----------------------------------------------------------------------------
void FindFeatureHistogram::execute()
{
setErrorCondition(0);
dataCheck();
if(getErrorCondition() < 0) { return; }
DataContainer::Pointer m = getDataContainerArray()->getDataContainer(m_SelectedFeatureArrayPath.getDataContainerName());
QString ss;
IDataArray::Pointer inputData = m->getAttributeMatrix(m_SelectedFeatureArrayPath.getAttributeMatrixName())->getAttributeArray(m_SelectedFeatureArrayPath.getDataArrayName());
if (NULL == inputData.get())
{
ss = QObject::tr("Selected array '%1' does not exist in the Voxel Data Container. Was it spelled correctly?").arg(m_SelectedFeatureArrayPath.getDataArrayName());
setErrorCondition(-11001);
notifyErrorMessage(getHumanLabel(), ss, getErrorCondition());
return;
}
QString dType = inputData->getTypeAsString();
IDataArray::Pointer p = IDataArray::NullPointer();
if (dType.compare("int8_t") == 0)
{
findHistogram<int8_t>(inputData, m_NewEnsembleArray, m_FeaturePhases, m_NumberOfBins, m_RemoveBiasedFeatures, m_BiasedFeatures);
}
else if (dType.compare("uint8_t") == 0)
{
findHistogram<uint8_t>(inputData, m_NewEnsembleArray, m_FeaturePhases, m_NumberOfBins, m_RemoveBiasedFeatures, m_BiasedFeatures);
}
else if (dType.compare("int16_t") == 0)
{
findHistogram<int16_t>(inputData, m_NewEnsembleArray, m_FeaturePhases, m_NumberOfBins, m_RemoveBiasedFeatures, m_BiasedFeatures);
}
else if (dType.compare("uint16_t") == 0)
{
findHistogram<uint16_t>(inputData, m_NewEnsembleArray, m_FeaturePhases, m_NumberOfBins, m_RemoveBiasedFeatures, m_BiasedFeatures);
}
else if (dType.compare("int32_t") == 0)
{
findHistogram<int32_t>(inputData, m_NewEnsembleArray, m_FeaturePhases, m_NumberOfBins, m_RemoveBiasedFeatures, m_BiasedFeatures);
}
else if (dType.compare("uint32_t") == 0)
{
findHistogram<uint32_t>(inputData, m_NewEnsembleArray, m_FeaturePhases, m_NumberOfBins, m_RemoveBiasedFeatures, m_BiasedFeatures);
}
else if (dType.compare("int64_t") == 0)
{
findHistogram<int64_t>(inputData, m_NewEnsembleArray, m_FeaturePhases, m_NumberOfBins, m_RemoveBiasedFeatures, m_BiasedFeatures);
}
else if (dType.compare("uint64_t") == 0)
{
findHistogram<uint64_t>(inputData, m_NewEnsembleArray, m_FeaturePhases, m_NumberOfBins, m_RemoveBiasedFeatures, m_BiasedFeatures);
}
else if (dType.compare("float") == 0)
{
findHistogram<float>(inputData, m_NewEnsembleArray, m_FeaturePhases, m_NumberOfBins, m_RemoveBiasedFeatures, m_BiasedFeatures);
}
else if (dType.compare("double") == 0)
{
findHistogram<double>(inputData, m_NewEnsembleArray, m_FeaturePhases, m_NumberOfBins, m_RemoveBiasedFeatures, m_BiasedFeatures);
}
else if (dType.compare("bool") == 0)
{
findHistogram<bool>(inputData, m_NewEnsembleArray, m_FeaturePhases, m_NumberOfBins, m_RemoveBiasedFeatures, m_BiasedFeatures);
}
notifyStatusMessage(getHumanLabel(), "Complete");
}
static void PopulateAttributeArrayList(AbstractFilter* filter, FilterParameter* filterParameter,
QComboBox* dcCombo, QComboBox* amCombo, WidgetType* attributeArraysWidget,
DataContainerArrayProxy& dcaProxy,
QVector<DataArrayPath> selectedPaths)
{
FilterParameterType* fp = dynamic_cast<FilterParameterType*>(filterParameter);
assert(fp != NULL);
DataContainerArray::Pointer dca = filter->getDataContainerArray();
if (NULL == dca.get()) { return; }
attributeArraysWidget->blockSignals(true);
attributeArraysWidget->clear();
// Get the selected Data Container Name from the DataContainerList Widget
QString currentDCName = dcCombo->currentText();
QString currentAttrMatName = amCombo->currentText();
// Loop over the data containers until we find the proper data container
QList<DataContainerProxy> containers = dcaProxy.dataContainers.values();
QListIterator<DataContainerProxy> containerIter(containers);
QVector<QString> daTypes = fp->getDefaultAttributeArrayTypes();
QVector< QVector<size_t> > cDims = fp->getDefaultComponentDimensions();
while (containerIter.hasNext())
{
DataContainerProxy dc = containerIter.next();
if (dc.name.compare(currentDCName) == 0)
{
// We found the proper Data Container, now populate the AttributeMatrix List
QMap<QString, AttributeMatrixProxy> attrMats = dc.attributeMatricies;
QMapIterator<QString, AttributeMatrixProxy> attrMatsIter(attrMats);
while (attrMatsIter.hasNext())
{
attrMatsIter.next();
QString amName = attrMatsIter.key();
if (amName.compare(currentAttrMatName) == 0)
{
// Clear the list of arrays from the QListWidget
attributeArraysWidget->clear();
// We found the selected AttributeMatrix, so loop over this attribute matrix arrays and populate the list widget
AttributeMatrixProxy amProxy = attrMatsIter.value();
QMap<QString, DataArrayProxy> dataArrays = amProxy.dataArrays;
QMapIterator<QString, DataArrayProxy> dataArraysIter(dataArrays);
while (dataArraysIter.hasNext())
{
dataArraysIter.next();
QString daName = dataArraysIter.key();
QListWidgetItem* daItem = new QListWidgetItem(daName);
daItem->setCheckState(Qt::Unchecked);
for (int i = 0; i < selectedPaths.size(); i++)
{
if (selectedPaths.at(i).getDataArrayName() == daName)
{
daItem->setCheckState(Qt::Checked);
}
}
IDataArray::Pointer da = dca->getPrereqIDataArrayFromPath<IDataArray, AbstractFilter>(NULL, DataArrayPath(dc.name, amProxy.name, daName));
attributeArraysWidget->addItem(daItem);
if (NULL != da.get() && ((daTypes.isEmpty() == false && daTypes.contains(da->getTypeAsString()) == false) || (cDims.isEmpty() == false && cDims.contains(da->getComponentDimensions()) == false)))
{
QList<QListWidgetItem*> rejectList = attributeArraysWidget->findItems(daName, Qt::MatchRecursive);
for (int i = 0; i < rejectList.size(); i++)
{
QListWidgetItem* item = rejectList[i];
item->setFlags(item->flags() & ~Qt::ItemIsEnabled);
}
}
}
}
}
}
}
attributeArraysWidget->blockSignals(false);
}
static void PopulateAttributeArrayComboBox(AbstractFilter* filter, FilterParameter* filterParameter,
QComboBox* dcCombo, QComboBox* amCombo, QComboBox* aaCombo,
DataContainerArrayProxy& dcaProxy)
{
FilterParameterType* fp = dynamic_cast<FilterParameterType*>(filterParameter);
assert(fp != NULL);
DataContainerArray::Pointer dca = filter->getDataContainerArray();
if (NULL == dca.get()) { return; }
bool alreadyBlocked = false;
if(aaCombo->signalsBlocked()) { alreadyBlocked = true; }
aaCombo->blockSignals(true);
aaCombo->clear();
// Get the selected Data Container Name from the DataContainerList Widget
QString currentDCName = dcCombo->currentText();
QString currentAttrMatName = amCombo->currentText();
// Loop over the data containers until we find the proper data container
QList<DataContainerProxy> containers = dcaProxy.dataContainers.values();
QListIterator<DataContainerProxy> containerIter(containers);
QVector<QString> daTypes = fp->getDefaultAttributeArrayTypes();
QVector< QVector<size_t> > cDims = fp->getDefaultComponentDimensions();
while (containerIter.hasNext())
{
DataContainerProxy dc = containerIter.next();
if (dc.name.compare(currentDCName) == 0)
{
// We found the proper Data Container, now populate the AttributeMatrix List
QMap<QString, AttributeMatrixProxy> attrMats = dc.attributeMatricies;
QMapIterator<QString, AttributeMatrixProxy> attrMatsIter(attrMats);
while (attrMatsIter.hasNext())
{
attrMatsIter.next();
QString amName = attrMatsIter.key();
if (amName.compare(currentAttrMatName) == 0)
{
// Clear the list of arrays from the QListWidget
aaCombo->clear();
// We found the selected AttributeMatrix, so loop over this attribute matrix arrays and populate the list widget
AttributeMatrixProxy amProxy = attrMatsIter.value();
QMap<QString, DataArrayProxy> dataArrays = amProxy.dataArrays;
QMapIterator<QString, DataArrayProxy> dataArraysIter(dataArrays);
while (dataArraysIter.hasNext())
{
dataArraysIter.next();
//DataArrayProxy daProxy = dataArraysIter.value();
QString daName = dataArraysIter.key();
IDataArray::Pointer da = dca->getPrereqIDataArrayFromPath<IDataArray, AbstractFilter>(NULL, DataArrayPath(dc.name, amProxy.name, daName));
aaCombo->addItem(daName);
if (NULL != da.get() && ((daTypes.isEmpty() == false && daTypes.contains(da->getTypeAsString()) == false) || (cDims.isEmpty() == false && cDims.contains(da->getComponentDimensions()) == false)))
{
QStandardItemModel* model = qobject_cast<QStandardItemModel*>(aaCombo->model());
if (NULL != model)
{
QStandardItem* item = model->item(aaCombo->findText(daName));
if (NULL != item)
{
item->setFlags(item->flags() & ~Qt::ItemIsEnabled);
}
}
}
}
}
}
}
aaCombo->setCurrentIndex(-1);
if(alreadyBlocked == false)
{
aaCombo->blockSignals(false);
}
}
}
