Esempi in C++ (Cpp) per ConsensusFeature::begin

Esempio n. 1

File: IsobaricChannelExtractor.C Progetto: aiche/open-ms-mirror

  bool IsobaricChannelExtractor::hasLowIntensityReporter_(const ConsensusFeature& cf) const
  {
    for (ConsensusFeature::const_iterator cf_it = cf.begin();
         cf_it != cf.end();
         ++cf_it)
    {
      if (cf_it->getIntensity() == 0.0)
      {
        return true;
      }
    }

    return false;
  }

Esempio n. 2

File: ConsensusFeature_test.C Progetto: BioITer/OpenMS

	TEST_EQUAL(ml(c1,c2), 1);
	TEST_EQUAL(ml(c2,c1), 0);
	TEST_EQUAL(ml(c2,c2), 0);
END_SECTION

START_SECTION((ConsensusFeature& operator=(const ConsensusFeature &rhs)))
  ConsensusFeature cons(tmp_feature);
  cons.insert(1,tmp_feature);

  ConsensusFeature cons_copy;
  cons_copy = cons;

  TEST_REAL_SIMILAR(cons_copy.getRT(),1.0)
  TEST_REAL_SIMILAR(cons_copy.getMZ(),2.0)
  TEST_REAL_SIMILAR(cons_copy.getIntensity(),200.0)
  TEST_EQUAL((cons_copy.begin())->getMapIndex(),1)
  TEST_EQUAL((cons_copy.begin())->getUniqueId(),3)
  TEST_EQUAL((cons_copy.begin())->getIntensity(),200)
END_SECTION

START_SECTION((ConsensusFeature(const ConsensusFeature &rhs)))

  ConsensusFeature cons(tmp_feature);
  cons.insert(1,tmp_feature);
  ConsensusFeature cons_copy(cons);

  TEST_REAL_SIMILAR(cons_copy.getRT(),1.0)
  TEST_REAL_SIMILAR(cons_copy.getMZ(),2.0)
  TEST_REAL_SIMILAR(cons_copy.getIntensity(),200.0)
  TEST_EQUAL((cons_copy.begin())->getMapIndex(),1)
  TEST_EQUAL((cons_copy.begin())->getUniqueId(),3)

Esempio n. 3

File: ConsensusXMLFile_test.C Progetto: aiche/open-ms-mirror

//features
TEST_EQUAL(map.size(), 6)
ConsensusFeature cons_feature = map[0];
TEST_REAL_SIMILAR(cons_feature.getRT(), 1273.27)
TEST_REAL_SIMILAR(cons_feature.getMZ(), 904.47)
TEST_REAL_SIMILAR(cons_feature.getIntensity(), 3.12539e+07)
TEST_REAL_SIMILAR(cons_feature.getPositionRange().minPosition()[0], 1273.27)
TEST_REAL_SIMILAR(cons_feature.getPositionRange().maxPosition()[0], 1273.27)
TEST_REAL_SIMILAR(cons_feature.getPositionRange().minPosition()[1], 904.47)
TEST_REAL_SIMILAR(cons_feature.getPositionRange().maxPosition()[1], 904.47)
TEST_REAL_SIMILAR(cons_feature.getIntensityRange().minPosition()[0], 3.12539e+07)
TEST_REAL_SIMILAR(cons_feature.getIntensityRange().maxPosition()[0], 3.12539e+07)
TEST_REAL_SIMILAR(cons_feature.getQuality(), 1.1)
TEST_EQUAL(cons_feature.getMetaValue("peptide_id") == DataValue("RefSeq:NC_1234"), true)
ConsensusFeature::HandleSetType::const_iterator it = cons_feature.begin();
TEST_REAL_SIMILAR(it->getIntensity(), 3.12539e+07)

cons_feature = map[5];
TEST_REAL_SIMILAR(cons_feature.getRT(), 1194.82)
TEST_REAL_SIMILAR(cons_feature.getMZ(), 777.101)
TEST_REAL_SIMILAR(cons_feature.getIntensity(), 1.78215e+07)
TEST_REAL_SIMILAR(cons_feature.getPositionRange().minPosition()[0], 1194.82)
TEST_REAL_SIMILAR(cons_feature.getPositionRange().maxPosition()[0], 1194.82)
TEST_REAL_SIMILAR(cons_feature.getPositionRange().minPosition()[1], 777.101)
TEST_REAL_SIMILAR(cons_feature.getPositionRange().maxPosition()[1], 777.101)
TEST_REAL_SIMILAR(cons_feature.getIntensityRange().minPosition()[0], 1.78215e+07)
TEST_REAL_SIMILAR(cons_feature.getIntensityRange().maxPosition()[0], 1.78215e+07)
TEST_REAL_SIMILAR(cons_feature.getQuality(), 0.0)
it = cons_feature.begin();
TEST_REAL_SIMILAR(it->getIntensity(), 1.78215e+07)