Sensor_Data::Sensor_Data( const Sensor_Data & other ){
operating_system_label_ = other.get_operating_system_label();
data_label_ = other.get_data_label();
data_ = other.get_data();
aux_ = other.get_aux();
}
/*Parameters:
* sensorData: Data returned from the DAQ. This is a vector of Sensor_Data object pointers.
* recordSize: The number of samples in each record
* sampleRate: The number of samples per second
* channelIDs: Vector of IDs for each channel, format: 2!CH7 --> card in slot 2, channel 7 on that card
* numPhysicalChannels The number of physical channels on the DAQ
* activeChannels: List of channels that have sensors connected to them. First parameter is the index of the channel in the list of channels on the DAQ.
* The second parameter is the channel ID
*/
void CSV_Output::writeDaqDataToFile(vector<Sensor_Data*>& sensorData, int recordSize, vector<string>& channelIDs, int numPhysicalChannels, vector<pair<int, string>>& activeChannels)
{
recordsCollected = 0; //CM 8/20/15 - reset when writing a new file. This is used to see how many records are actually beeing written to a file.
// If this is less than the specified file length in the config file, using this variable will accurately say how long
// a file actually is.
int currentWriteTime = int(currentTimeSeconds()); //CM 4/14/15 - get the current (now) time for comparison to the last write time
//CM 7/15/15 - testing time required for iterating and storing data into a string ============
clock_t start;
start = clock();
double duration = 0.0;
//============================================================================================
try
{
double *currentSensorDataDouble = NULL; //CM 8/10/15 - move definition outside of sensor loop
size_t sensorIt; //iterator through the list of sensor objects representing samples returned from the DAQ
size_t sensorDataSize = sensorData.size();
//Iterate through each sensor object and pull out the data
for (sensorIt = 0; sensorIt != sensorDataSize; sensorIt++)
{
Sensor_Data* currentSensorData = sensorData.at(sensorIt); //grab the current sensor data object
//===============================================================
//CM 8/12/15 - record the timestamp of the first record
//If at the first sensor data entry then grab the timestamp
if (sensorIt == 0)
{
//CM 5/27/15 - since the timestamp is the same for each channel for each record (and only processing one record at a time),
// Then just grab the timestamp of the first entry, i.e., index = 0
int timeIndex = 0;
::SafeArrayGetElement(currentSensorData->getTimeSeconds(), (LONG *)&timeIndex, &firstTimeSecond);
::SafeArrayGetElement(currentSensorData->getTimeFraction(), (LONG *)&timeIndex, &firstTimeFraction);
}
//===============================================================
//CM 8/7/15 - update to use safe array access ===========================================================
currentSensorDataDouble = NULL;
HRESULT hr;
// Get a pointer to the elements of the array.
hr = ::SafeArrayAccessData(currentSensorData->getData(), (void**)¤tSensorDataDouble);
if (FAILED(hr)){
cout << "Error geting access to SAFEARRAY of sensor data. Aborting..." << endl;
return;
}
double d = 0.0; //hold each sample as the sensor data is iterated, once saved, this variable is
// set to the next sample from the sensor
//Now to iterate through the sensor data. This is completed by "jumping" through the linear stream of data
// provided by the DAQ for each channel for each record. Even though I am not accessing it in linear fashion,
// I only see one sample once, which leads to linear performance.
// Format of linear stream:
// For record of size 4 and 3 channels:
// ------------------------------ record 1 ------------------------------ ----- record 2----------
// [[channel 1 ; 4 samples][channel 2 ; 4 samples][channel 3 ; 4 samples][channel 1 ; 4 samples]...]
//iterate over all the available records
int sensorDataNumRecords = currentSensorData->getNumRecords();
for (int record = 0; record < sensorDataNumRecords; record++)
{
recordsCollected++; //CM 8/6/15 - record each record written out
//iterate through each record, i.e., recordSize is the number of samples in a record,
// so if the record size is 20, then 20 samples are read for each channel for that specific record
for (size_t i = 0; i < recordSize; i++)
{
//Only pull daata from channels with sensors
if (ALL_CHANNEL_DATA == 0)
{
int channel = 0; //specify which channel data to get
//iterate through all the active channels
size_t activeChannelSize = activeChannels.size();
//for(int specificChannel = 0; specificChannel < activeChannels.size();specificChannel++){
for (size_t it = 0; it != activeChannelSize; it++)
{
//channel = activeChannels.at(specificChannel).first;
channel = activeChannels.at(it).first;
//====== CM 5/19/15 - if no header for the current file, create it on the first pass of the channel info =========
if (headerWritten == false)
{
string currentChannelID = channelIDs.at(channel);
//if the last channel, leave off the comma
//CM 8/7/15 - if the last channel, then leave off the comma - check the next iterator to see if at the end
if (it == activeChannelSize - 1)
{
string temp = "Data_" + currentChannelID + '\n'; //CM 8/7/15 - remove the timestamp from the header
headerStdStr.append(temp);
temp.clear();
headerWritten = true; //header is written, do not write one again until the next CSV file
}
//otherwise, put the comma on since more channels are to come
else
{
headerStdStr.append("Data_" + currentChannelID + ','); //CM 8/7/15 - remove the timestamp from the header
}
}
//index calculation: (the current channel * the size of a record) + the current index in the record
size_t index = (channel*recordSize) + i;
d = (double)currentSensorDataDouble[index]; //CM 8/7/15 - update to use safe access
//add current sample to string to be written to file
//CM 5/19/15 - if at the last channel, do not add a comma
//CM 8/7/15 - if the last channel, then leave off the comma - check the next iterator to see if at the end
if (it == activeChannelSize - 1)
{
outputStdStr.append(to_string(d)); //CM 7/10/15 - using string
}
//Otherwise, still more channels to go, so add a comma
else
{
outputStdStr.append(to_string(d) + ','); //CM 7/10/15 - using string
}
}
}
//otherwise, pull samples from all channels, despite if they have sensors connected to them
else
{
//iterate through all channels (active and inactive) and pull the data
for (int channel = 0; channel < numPhysicalChannels; channel++)
{
//====== CM 5/19/15 - if no header for the current file, create it on the first pass of the channel info =========
if (headerWritten == false){
//if the last channel, leave off the comma
string currentChannelID = channelIDs.at(channel); //CM 7/10/15 - using string
if (channel == numPhysicalChannels - 1)
{
headerStdStr.append("Data_" + currentChannelID + '\n'); //CM 8/7/15 - remove the timestamp from the header
headerWritten = true; //header is written, do not write one again until the next CSV file
}
//otherwise, put the comma on since more channels are to come
else
{
headerStdStr.append("Data_" + currentChannelID + ','); //CM 8/7/15 - remove the timestamp from the header
}
}
//================================================================================================================
//index calculation: (the current channel * the size of a record) + the current index in the record
size_t index = (channel*recordSize) + i;//+(record*data_count);
d = (double)currentSensorDataDouble[index]; //CM 8/7/15 - update to use safe access
//CM 5/19/15 - if at the last channel, do not add a comma
if (channel == numPhysicalChannels - 1)
{
outputStdStr.append(to_string(d)); //CM 7/10/15 - using string
}
//Otherwise, still more channels to go, so add a comma
else
{
outputStdStr.append(to_string(d) + ','); //CM 7/10/15 - using string
}
}
}
outputStdStr.append("\n"); //signal end of line once an entry in a record for all channels is recorded
}
}
::SafeArrayUnaccessData(currentSensorData->getData()); //CM 8/10/15 - close access to current safe array
//===========================================================================================================
}
}
catch (...)
{
//for now, just output an error message indicating where the error occured
cout << "Exception caught: CSV_Output class, wrtieDaqDataToFile." << endl;
}
//========================================================================================
// CM 8/18/15 - writing to file after iterating over data so writing can occur after parsing data since I changed my logic to collect all
// the records for one file in one collection sequence in DAQ.cpp
// There "should" not be a problem with this since I collect the same number of records in one collection sequence
// (before coming to this function) as the fileLength, hence recordsCollected "should" always equal fileLength
// when control reaches here.
//CM 8/12/15 - converting timestamp from DAQs to current date and time =============
time_t t = firstTimeSecond;
// convert now to string form
struct tm timeinfo;
localtime_s(&timeinfo, &t);
char buf[80];
// Visit http://en.cppreference.com/w/cpp/chrono/c/strftime
// for more information about date/time format
strftime(buf, sizeof(buf), "%Y-%m-%d_%H_%M_%S", &timeinfo); //format timestamp of first data point in the file to a date/time
//==================================================================================
currentFileName = string(buf); //create a string out of the formated timstamp
currentFileName = moveDir + currentFileName + ".csv"; //add file extention
ofstream Out(currentFileName, ios::app); //CM 8/12/15 - Now open a file with the name being the timestampe of the first data point
//====================================================================================================================
//CM 8/12/15 - add header to store information necessary to calculate the exact time of each sample in the file
//NOTE: use to_string() to retain the accuracy of the timestamp info, i.e., all significant figures are retained
//header for file info: Time info for first sample in the file, sample rate, and length of the file in seconds
Out << "Time Integer, Time Fraction, Sample Rate (samples per second), Length of file in seconds\n";
//output the file info
Out << to_string(firstTimeSecond) << ',' << to_string(firstTimeFraction) << ',' << recordSize << ',' << recordsCollected << '\n';
//header to describe what the data in the file is
Out << "Sensor Data organized by CSV columns. Each column represents the data from one channel on a specific DAQ\n";
//====================================================================================================================
Out << headerStdStr;
Out << outputStdStr; //CM 5/27/15 - write the entire set of record(s) info to the file at once (i.e., only one file I/O)
headerStdStr.clear();
outputStdStr.clear();
Out.flush(); //CM 7/23/15
Out.close();
//CM 7/15/15 - testing time required for iterating and storing data into a string ============
duration = (clock() - start) / (double)CLOCKS_PER_SEC;
cout << "Time to iterate over data and store sensor data into CSV file: " << duration << "s" << endl;
headerWritten = false; //CM 5/19/15 - with the new file, signal the header needs to be written
numPoints = 0;
}
/*Parameters:
* sensorData: Data returned from the DAQ. This is a vector of Sensor_Data object pointers.
* recordSize: The number of samples in each record
* sampleRate: The number of samples per second
* channelIDs: Vector of IDs for each channel, format: 2!CH7 --> card in slot 2, channel 7 on that card
* numPhysicalChannels The number of physical channels on the DAQ
* activeChannels: List of channels that have sensors connected to them. First parameter is the index of the channel in the list of channels on the DAQ.
* The second parameter is the channel ID
* daqID The unique identifier for the daq that the passed in sensor data originated - NOTE: I am not sure this is still used.
*/
void CSV_Output::writeDaqDataToFile(std::vector<Sensor_Data*>* sensorData, int recordSize, double sampleRate, std::vector<std::string>* channelIDs, int numPhysicalChannels, list< pair<int,std::string> > activeChannels, std::string daqID){
std::string fileName = "";
recordsCollected = 0; //CM 8/20/15 - reset when writing a new file. This is used to see how many records are actually beeing written to a file.
// If this is less than the specified file length in the config file, using this variable will accurately say how long
// a file actually is.
int currentWriteTime = int(currentTimeSeconds()); //CM 4/14/15 - get the current (now) time for comparison to the last write time
std::vector<Sensor_Data*>::iterator sensorIt; //iterator through the list of sensor objects representing samples returned from the DAQ
try{
//CM 5/27/15 - update current file name to include the DAQ ID when this function is called for the very first time
// This is analogous to detecting the beginning of a write to the file so the channel ID header can be written
// only once to the file.
if(initializeFileName == false){
initializeFileName = true;
}
if (DEBUG_MODE == 1){
std::cout << "Writing data..." << std::endl;
}
//initialize loop count variables for debugging. They need to be declared outside of a check for debug mode is on/off
//=======================
int sensorItLoopCount = 0;
int recordEntryLoopCount = 0;
int recordSizeLoopCount = 0;
int channelLoopCount = 0;
//=======================
//CM 7/15/15 - testing time required for iterating and storing data into a string ============
clock_t start;
start = std::clock();
double duration = 0.0;
//double durationSum = 0.0;
//============================================================================================
double *currentSensorDataDouble = NULL; //CM 8/10/15 - move definition outside of sensor loop
//Iterate through each sensor object and pull out the data
for(sensorIt = sensorData->begin(); sensorIt != sensorData->end();sensorIt++){
//keep track of the number of sensor loops
if(DEBUG_MODE == 1){
sensorItLoopCount++;
}
Sensor_Data* currentSensorData = NULL;
currentSensorData = *sensorIt; //grab the current sensor data object
//===============================================================
//CM 8/12/15 - record the timestamp of the first record
//If at the first sensor data entry then grab the timestamp
if(sensorIt == sensorData->begin()){
//CM 5/27/15 - since the timestamp is the same for each channel for each record (and only processing one record at a time),
// Then just grab the timestamp of the first entry, i.e., index = 0
int timeIndex = 0;
::SafeArrayGetElement(currentSensorData->getTimeSeconds(), (LONG *)&timeIndex, &firstTimeSecond);
::SafeArrayGetElement(currentSensorData->getTimeFraction(), (LONG *)&timeIndex, &firstTimeFraction);
}
//===============================================================
//CM 8/7/15 - update to use safe array access ===========================================================
currentSensorDataDouble = NULL;
HRESULT hr;
// Get a pointer to the elements of the array.
hr = ::SafeArrayAccessData(currentSensorData->getData(), (void**)¤tSensorDataDouble);
if (FAILED(hr)){
cout<<"Error geting access to SAFEARRAY of sensor data. Aborting..."<<endl;
return;
}
//=======================================================================================================
//get the number of samples in the sample data
double ts = 0.0;//CM 5/26/15 - store the time second timestamp for the sample
double tf = 0.0; //CM 5/26/15 - store the time fraction timestamp for the sample
//CM 5/27/15 - since the timestamp is the same for each channel for each record (and only processing one record at a time),
// Then just grab the timestamp of the first entry, i.e., index = 0
//CM 8/20/15 - I do not think I need getting the timestamp here, but leave here for now just in case
//int timeIndex = 0;
//::SafeArrayGetElement(currentSensorData->getTimeSeconds(), (LONG *)&timeIndex, &ts);
//::SafeArrayGetElement(currentSensorData->getTimeFraction(), (LONG *)&timeIndex, &tf);
double d = 0.0; //hold each sample as the sensor data is iterated, once saved, this variable is
// set to the next sample from the sensor
//Now to iterate through the sensor data. This is completed by "jumping" through the linear stream of data
// provided by the DAQ for each channel for each record. Even though I am not accessing it in linear fashion,
// I only see one sample once, which leads to linear performance.
// Format of linear stream:
// For record of size 4 and 3 channels:
// ------------------------------ record 1 ------------------------------ ----- record 2----------
// [[channel 1 ; 4 samples][channel 2 ; 4 samples][channel 3 ; 4 samples][channel 1 ; 4 samples]...]
//iterate over all the available records
for (int record = 0; record < currentSensorData->getNumRecords(); record++)
{
recordsCollected++; //CM 8/6/15 - record each record written out
if(DEBUG_MODE == 1){
recordEntryLoopCount++;
}
//iterate through each record, i.e., recordSize is the number of samples in a record,
// so if the record size is 20, then 20 samples are read for each channel for that specific record
for (size_t i = 0; i < recordSize; i++)
{
if(DEBUG_MODE == 1){
recordSizeLoopCount++;
}
//Only pull daata from channels with sensors
if(ALL_CHANNEL_DATA == 0){
int channel = 0; //specify which channel data to get
//iterate through all the active channels
//=================================================================================================================================
//CM 8/7/15 - since changing to using std::list and std::pair, I need to iterate through the list through using an iterator
std::list< std::pair<int,std::string> >::iterator it;
//=================================================================================================================================
//for(int specificChannel = 0; specificChannel < activeChannels.size();specificChannel++){
for(it = activeChannels.begin(); it != activeChannels.end();it++){
//channel = activeChannels.at(specificChannel).first;
channel = (*it).first;
if(DEBUG_MODE == 1){
channelLoopCount++;
}
//====== CM 5/19/15 - if no header for the current file, create it on the first pass of the channel info =========
if(headerWritten == false){
std::string currentChannelID = channelIDs->at(channel);
//if the last channel, leave off the comma
//CM 8/7/15 - if the last channel, then leave off the comma - check the next iterator to see if at the end
if(std::next(it,1) == activeChannels.end()){
std::string temp = "Data_"+currentChannelID+'\n'; //CM 8/7/15 - remove the timestamp from the header
headerStdStr.append(temp);
temp.clear();
headerWritten = true; //header is written, do not write one again until the next CSV file
}
//otherwise, put the comma on since more channels are to come
else{
headerStdStr.append("Data_"+currentChannelID+','); //CM 8/7/15 - remove the timestamp from the header
}
}
//index calculation: (the current channel * the size of a record) + the current index in the record
size_t index = (channel*recordSize)+i;
d = (double)currentSensorDataDouble[index]; //CM 8/7/15 - update to use safe access
//add current sample to string to be written to file
//CM 5/19/15 - if at the last channel, do not add a comma
//CM 8/7/15 - if the last channel, then leave off the comma - check the next iterator to see if at the end
if(std::next(it,1) == activeChannels.end()){
outputStdStr.append(std::to_string(d)); //CM 7/10/15 - using std::string
if(DETAILED_OUPUT == 1){
numPoints++;
}
}
//Otherwise, still more channels to go, so add a comma
else{
outputStdStr.append(std::to_string(d)+','); //CM 7/10/15 - using std::string
if(DETAILED_OUPUT == 1){
numPoints++;
}
}
}
}
//otherwise, pull samples from all channels, despite if they have sensors connected to them
else{
//iterate through all channels (active and inactive) and pull the data
for(int channel = 0; channel < numPhysicalChannels; channel++)
{
if(DEBUG_MODE == 1){
channelLoopCount++;
}
//====== CM 5/19/15 - if no header for the current file, create it on the first pass of the channel info =========
if(headerWritten == false){
//if the last channel, leave off the comma
std::string currentChannelID = channelIDs->at(channel); //CM 7/10/15 - using std::string
if(channel == numPhysicalChannels-1){
headerStdStr.append("Data_"+currentChannelID+'\n'); //CM 8/7/15 - remove the timestamp from the header
headerWritten = true; //header is written, do not write one again until the next CSV file
}
//otherwise, put the comma on since more channels are to come
else{
headerStdStr.append("Data_"+currentChannelID+','); //CM 8/7/15 - remove the timestamp from the header
}
}
//================================================================================================================
//index calculation: (the current channel * the size of a record) + the current index in the record
size_t index = (channel*recordSize)+i;//+(record*data_count);
d = (double)currentSensorDataDouble[index]; //CM 8/7/15 - update to use safe access
//CM 5/19/15 - if at the last channel, do not add a comma
if(channel == numPhysicalChannels-1){
outputStdStr.append(std::to_string(d)); //CM 7/10/15 - using std::string
if(DETAILED_OUPUT == 1){
numPoints++;
}
}
//Otherwise, still more channels to go, so add a comma
else{
outputStdStr.append(std::to_string(d)+','); //CM 7/10/15 - using std::string
if(DETAILED_OUPUT == 1){
numPoints++;
}
}
}
}
outputStdStr.append("\n"); //signal end of line once an entry in a record for all channels is recorded
}
}
::SafeArrayUnaccessData(currentSensorData->getData()); //CM 8/10/15 - close access to current safe array
//===========================================================================================================
//debugging - check to see how many times the loops above are actually being called
if(DEBUG_MODE == 1){
std::cout<<"Safe loop count: "<<sensorItLoopCount<<" Record Entry Loop Count: "<<recordEntryLoopCount<< " Record Size Loop Count: "<<recordSizeLoopCount<<" Channel Loop Count: "<<channelLoopCount<<std::endl;
recordEntryLoopCount = 0; //reset
channelLoopCount = 0;
recordSizeLoopCount = 0;
}
}
//CM 7/15/15 - testing time required for iterating and storing data into a string ============
duration = (std::clock()-start) / (double) CLOCKS_PER_SEC;
std::cout<<"Time to iterate over data and store sensor data into string: "<<duration<<std::endl;
outputCount++; //CM 3/18/15 - increment for next write to file
}
catch (...){
//for now, just output an error message indicating where the error occured
std::cout<<"Exception caught: CSV_Output class, wrtieDaqDataToFile."<<std::endl;
}
channelIDs = NULL; //CM 7/24/15 - cut association with pointer to channel IDs
sensorData = NULL; //CM 7/23/15 - cut association with pointer to sensor data
//========================================================================================
// CM 8/18/15 - writing to file after iterating over data so writing can occur after parsing data since I changed my logic to collect all
// the records for one file in one collection sequence in DAQ.cpp
// There "should" not be a problem with this since I collect the same number of records in one collection sequence
// (before coming to this function) as the fileLength, hence recordsCollected "should" always equal fileLength
// when control reaches here.
// recordsCollected = 0; //reset
//CM 8/12/15 - converting timestamp from DAQs to current date and time =============
time_t t = firstTimeSecond;
// convert now to string form
char* dt = ctime(&t);
struct tm * timeinfo;
timeinfo = localtime(&t);
//CM 8/20/15 - keep here so testing date/time can be done
//debugging =================
//cout << "The local date and time is: " << dt << endl;
//===========================
char buf[80];
// Visit http://en.cppreference.com/w/cpp/chrono/c/strftime
// for more information about date/time format
strftime(buf, sizeof(buf), "%Y-%m-%d_%H_%M_%S", timeinfo); //format timestamp of first data point in the file to a date/time
//CM 8/20/15 - keep here so testing date/time can be done
//debugging =================
//cout<<buf<<endl;
//==========================
//==================================================================================
currentFileName = string(buf); //create a string out of the formated timstamp
currentFileName = currentFileName + ".csv"; //add file extention
std::ofstream Out(currentFileName, std::ios::app); //CM 8/12/15 - Now open a file with the name being the timestampe of the first data point
//====================================================================================================================
//CM 8/12/15 - add header to store information necessary to calculate the exact time of each sample in the file
//NOTE: use to_string() to retain the accuracy of the timestamp info, i.e., all significant figures are retained
//header for file info: Time info for first sample in the file, sample rate, and length of the file in seconds
Out << "Time Integer, Time Fraction, Sample Rate (samples per second), Length of file in seconds\n";
//debugging ========================== comparing the set file length to how many records are actually there,
// this will be different than the file length when the system is
// shutdown during a collection cycle.
//cout<<"Records collected: "<<recordsCollected<<endl;
//cout<<"File length: "<<fileLength<<endl;
//====================================
//output the file info
Out <<to_string(firstTimeSecond)<<','<<to_string(firstTimeFraction)<<','<<sampleRate<<','<<recordsCollected<<'\n';
//header to describe what the data in the file is
Out <<"Sensor Data organized by CSV columns. Each column represents the data from one channel on a specific DAQ\n";
//====================================================================================================================
Out << headerStdStr;
Out << outputStdStr; //CM 5/27/15 - write the entire set of record(s) info to the file at once (i.e., only one file I/O)
headerStdStr.clear();
outputStdStr.clear();
Out.flush(); //CM 7/23/15
Out.close();
//CM 4/16/15 - move completed file to another directory
std::string moveCommand = "move " + currentFileName + " " + moveDir;
system(moveCommand.c_str()); //move recent finished file
//perform time benchmark testing for processing each file
/*
double timeForCollection = 0.0;
timeForCollection = endTimer();
std::cout<<"-------------------------------------------------"<<std::endl;
std::cout<<"Collection/Write cycle time lapse: "<<timeForCollection<<std::endl;
std::cout<<"-------------------------------------------------"<<std::endl;
*/
currentFileName = "daq_data_"+std::to_string(currentWriteTime)+"_output.txt"; //CM 4/14/15 - create the new output file based on the current time
headerWritten = false; //CM 5/19/15 - with the new file, signal the header needs to be written
//only print info when wanting more details about what the collection system is doint
if(DETAILED_OUPUT == 1){
std::cout<<"Number of samples written: "<<numPoints<<" over "<<fileLength<<" seconds"<<std::endl
<<'\t'<<"Number of samples written = sample rate * time slice for collecting (in seconds) * number of channels ==>"<<std::endl
<<"\t \t"<<numPoints<<" = "<<sampleRate<<" * "<<fileLength<<" * "<<numPhysicalChannels<<std::endl
<<std::endl;
}
numPoints = 0;
}
