AliAnalysisGrid* CreateAlienHandler(TString mode="test",TString fname="testName"){
AliAnalysisAlien *plugin = new AliAnalysisAlien();
plugin->SetOverwriteMode();
plugin->SetExecutableCommand("aliroot -q -b");
plugin->SetRunMode(mode.Data());
plugin->SetNtestFiles(20);
// Set versions of used packages
plugin->SetAPIVersion("V1.1x");
//plugin->SetROOTVersion("v5-34-26");
plugin->SetAliROOTVersion("v5-07-20");
plugin->SetAliPhysicsVersion("vAN-20160203");
// Declare input data to be processed.
plugin->SetNrunsPerMaster(100);
plugin->SetSplitMaxInputFileNumber(15); // 3 in the LEGO trains
plugin->SetGridDataDir("/alice/data/2013/LHC13c/");
plugin->SetGridWorkingDir(Form("%s/",fname.Data()));
plugin->SetRunPrefix("000");
plugin->SetDataPattern("/ESDs/pass2/*/AliESDs.root");
plugin->SetAnalysisMacro("TaskDeuteronTreeTest.C");
plugin->SetExecutable("TaskDeuteronTreeTest.sh");
plugin->SetJDLName("TaskDeuteronTreeTest.jdl");
Int_t runnumbers[]={195596,195592};
for(Int_t irun=0;irun<2;irun++){
Printf("%d %d",irun,runnumbers[irun]);
plugin->AddRunNumber(runnumbers[irun]);
}
TString extraLibs;
plugin->AddIncludePath("-I. -I$ROOTSYS/include -I$ALICE_ROOT/include -I$ALICE_PHYSICS/include");
//plugin->SetAdditionalLibs("libCORRFW.so libPWGTools.so libPWGCFCorrelationsBase.so libPWGCFCorrelationsDPhi.so AliAnalysisTaskPhiCorrelations.cxx AliAnalysisTaskPhiCorrelations.h");
//plugin->SetAnalysisSource("AliAnalysisTaskPhiCorrelations.cxx");
plugin->SetGridOutputDir("output"); // In this case will be $HOME/work/output
// Declare the output file names separated by blancs.
// (can be like: file.root or file.root@ALICE::Niham::File)
//plugin->SetDefaultOutputs(0);
//plugin->SetOutputFiles("AnalysisResults.root.root");
plugin->SetMergeViaJDL(kTRUE);
plugin->SetOneStageMerging(kFALSE);
//plugin->SetMaxMergeFiles(40);
//plugin->SetMaxMergeStages(4);
plugin->SetTTL(50000);
// Optionally set input format (default xml-single)
plugin->SetInputFormat("xml-single");
// Optionally modify job price (default 1)
plugin->SetPrice(1);
// Optionally modify split mode (default 'se')
//plugin->SetSplitMaxInputFileNumber();
plugin->SetSplitMode("se");
return plugin;
}
//_______________________________| CreateAlienHandler |________________________________
AliAnalysisGrid* CreateAlienHandler()
{
AliAnalysisAlien *Plugin = new AliAnalysisAlien();
Plugin->SetRunMode(fPluginMode.Data());
Plugin->SetUser(fUsername.Data());
Plugin->SetAPIVersion("V1.1x");
Plugin->SetROOTVersion("v5-34-30-alice-12");
Plugin->SetAliROOTVersion("v5-07-20-4");
Plugin->SetAliPhysicsVersion("vAN-20160129-1");
Plugin->SetNtestFiles(1);
Plugin->SetFileForTestMode(TestFilesWPlugin.Data());
// Set data search pattern for DATA grid Mode
Plugin->SetGridDataDir("/alice/sim/2013/LHC13b2_efix_p1"); // specify MC sample
if(readAOD) Plugin->SetDataPattern("AOD/*AliAOD.root");// specify AOD set
else Plugin->SetDataPattern("*/AliESDs.root");
Int_t totruns=0;
//gROOT->LoadMacro("$ALICE_PHYSICS/PWGHF/vertexingHF/AddGoodRuns.C");
gROOT->LoadMacro("AddGoodRuns.C");
totruns += AddGoodRuns(Plugin,"LHC13b","LHC13b2_efix_p1"); //Set accordingly
Plugin->SetNrunsPerMaster(totruns);
Plugin->SetGridWorkingDir("SingleTrkEff/LHC13b2_efix_p1/16Feb2016/");
Plugin->SetGridOutputDir("out");
Plugin->SetExecutable("STE16Feb2016.sh");
Plugin->AddIncludePath("-I. -I$ROOTSYS/include -I$ALICE_PHYSICS -I$ALICE_PHYSICS/include -I$ALICE_PHYSICS/ITS -I$ALICE_PHYSICS/TPC -I$ALICE_PHYSICS/CONTAINERS -I$ALICE_PHYSICS/STEER/STEER -I$ALICE_PHYSICS/STEER/STEERBase -I$ALICE_PHYSICS/STEER/ESD -I$ALICE_PHYSICS/STEER/AOD -I$ALICE_PHYSICS/TRD -I$ALICE_PHYSICS/macros -I$ALICE_PHYSICS/ANALYSIS -I$ALICE_PHYSICS/OADB -g");
Plugin->SetSplitMaxInputFileNumber(5);
Plugin->SetDefaultOutputs(kTRUE);
Plugin->SetMergeViaJDL(kTRUE); // Merge Via JDL
Plugin->SetOneStageMerging(kFALSE);
Plugin->SetMaxMergeStages(2);
Plugin->SetAnalysisMacro("STE16Feb2016.C");
Plugin->SetJDLName("STE16Feb2016.jdl");
return Plugin;
}
//######################################################################################################################################
AliAnalysisAlien* CreateAlienHandler ( const char* gridMode, const char* tag, unsigned int nr_test_files, unsigned int TTL,
const char* outdir, const char subworkdir, const char* extradirlvl ) {
AliAnalysisAlien* plugin = new AliAnalysisAlien();
if ( !plugin ) { std::cout << "!!! -->> alien handler could not be created <<-- !!!" << std::endl; return NULL;}
plugin->AddIncludePath("-I.");
plugin->AddIncludePath("-I$ALICE_PHYSICS/include");
plugin->AddIncludePath("-I$ALICE_ROOT/include");
plugin->AddIncludePath("-I$FASTJET/include");
plugin->AddIncludePath("-I/usr/include");
// unsigned int kGridMaxMergeFiles = 100; // Number of files merged in a chunk grid run range
// unsigned int kMaxInitFailed = 10 ; // Optionally set number of failed jobs that will trigger killing waiting sub-jobs.
TString kGridOutdir = outdir ; // AliEn output directory. If blank will become output_<kTrainName>
TString kGridSubWorkDir = subworkdir ; // sub working directory not to confuse different run xmls
TString kGridExtraAliendirLevel = extradirlvl ; // sub working directory not to confuse different run xmls
TString kWorkDir = tag; // AliEn work dir; relative to AliEn $HOME
TString kTrainName = "cdfjets"; // *CHANGE ME* (no blancs or special characters)
TString macroName(""); macroName = Form("%s.C", kTrainName.Data());
TString execName(""); execName = Form("%s.sh", kTrainName.Data());
TString jdlName(""); jdlName = Form("%s.jdl", kTrainName.Data());
// Set run mode. Can be "full", "test", "offline", "submit" or "merge"
plugin->SetRunMode(gridMode);
if (std::strcmp(gridMode, "test")) { plugin->SetCheckCopy(kFALSE); }
// Set the number of test files; set to kGridFilesPerJob as to evaluate the memory consumption and ttl on grid
plugin->SetNtestFiles ( nr_test_files );
// Job tag
plugin->SetJobTag(tag);
// AliEn directory containing the input packages
plugin->SetGridWorkingDir(tag);
// Declare alien output directory. Relative to working directory.
plugin->SetGridOutputDir( kGridOutdir.Data() ); // In this case will be $HOME/work/output
// Optionally modify the executable name (default analysis.sh)
plugin->SetExecutable(execName.Data());
// Optionally set a name for the generated analysis macro (default MyAnalysis.C)
plugin->SetAnalysisMacro(macroName.Data());
// Optionally modify the name of the generated JDL (default analysis.jdl)
plugin->SetJDLName(jdlName.Data());
// Use the output files connected to output containers from the analysis manager
// rather than the files defined by SetOutputFiles
plugin->SetDefaultOutputs(kTRUE);
//******************** PLUGIN OPTIONS ************************
// min (nr,4) replicas in grid storage
plugin->SetNumberOfReplicas(2);
// Optionally set time to live
plugin->SetTTL(TTL);
// Optionally set maximum number of input files/subjob (default 100, put 0 to ignore)
plugin->SetSplitMaxInputFileNumber ( nr_test_files );
// Use xrootd tweaks to reduce timeouts in file access
plugin->SetFastReadOption ( kFALSE );
// Maximum initial consecutive subjobs accepted to fail.
// plugin->SetMaxInitFailed ( kMaxInitFailed );
// Optionally resubmit threshold.
// plugin->SetMasterResubmitThreshold(90);
// Number of runs per masterjob
// plugin->SetNrunsPerMaster(1);
// exit from aliensh after submmiting job
plugin->SetDropToShell ( kTRUE );
// Overwrite existing files if any
plugin->SetOverwriteMode();
// write the output to subdirs named after run number
// plugin->SetOutputToRunNo(1);
// Optionally set input format (default xml-single)
plugin->SetInputFormat("xml-single");
// Optionally modify job price (default 1)
plugin->SetPrice(1);
// We split per SE or file
plugin->SetSplitMode("se");
// MERGING - Enable merging via automatic JDL
plugin->SetMergeViaJDL(kTRUE);
// Maximum number of files to be merged in one chunk
plugin->SetOneStageMerging(kFALSE);
// Maximum number of merging stages
plugin->SetMaxMergeStages(2);
// Optionally set maximum number of files merged in a chunk (default 100, put 0 to ignore)
// plugin->SetMaxMergeFiles ( kGridMaxMergeFiles );
return plugin;
}
AliAnalysisGrid* CreateAlienHandler(const char* mode = "offline")
{
//if (!AliAnalysisGrid::CreateToken()) return NULL;
AliAnalysisAlien *plugin = new AliAnalysisAlien();
plugin->SetRunMode(mode); // "full", "test", "offline", "submit" or "terminate"
plugin->SetMergeViaJDL(kTRUE);
plugin->SetOneStageMerging(kFALSE);
plugin->SetMaxMergeStages(2);
plugin->SetAPIVersion("V1.1x");
plugin->SetROOTVersion("v5-30-03");
plugin->SetAliROOTVersion("v5-02-16-AN");
// add data through aliensh find procedure.
//plugin->SetGridDataDir("/alice/sim/LHC11d2/");
plugin->SetGridDataDir("/alice/data/2011/LHC11e");
//plugin->SetDataPattern("*pass1/*ESDs.root");
//plugin->SetDataPattern("*tag.root");
//plugin->SetDataPattern("*pass1/*tag.root");
plugin->SetDataPattern("*AOD.root");
//plugin->AddRunNumber(119161);
//plugin->AddRunNumber("000162740");
//plugin->AddRunNumber("000161585");
plugin->AddRunNumber("000162644");
// Method 2: Declare existing data files
//plugin->AddDataFile("tag.xml");
// plugin->AddDataFile("/alice/data/2008/LHC08c/000057657/raw/Run57657.Merged.RAW.tag.root");
plugin->SetGridWorkingDir("eta");
plugin->SetGridOutputDir("output"); // In this case will be $HOME/work/output
// TString source = "";
// source += "EtaCandidate.cxx ";
// source += "EtaPriCandidate.cxx ";
// source += "EtaConfig.cxx ";
// source += "EtaOutput.cxx ";
// source += "EtaAnalysis.cxx ";
// source += "EtaTask.cxx ";
// plugin->SetAnalysisSource(source);
plugin->SetAnalysisSource("EtaCandidate.cxx EtaPriCandidate.cxx EtaConfig.cxx EtaOutput.cxx EtaAnalysis.cxx EtaTask.cxx");
// TString libs = source;
// libs += "EtaCandidate.h ";
// libs += " EtaPriCandidate.h";
// libs += " EtaConfig.h";
// libs += " EtaOutput.h";
// libs += " EtaAnalysis.h";
// libs += " EtaTask.h";
// plugin->SetAdditionalLibs(libs);
plugin->SetAdditionalLibs("EtaCandidate.h EtaCandidate.cxx EtaPriCandidate.h EtaPriCandidate.cxx EtaConfig.h EtaConfig.cxx EtaOutput.h EtaOutput.cxx EtaAnalysis.h EtaAnalysis.cxx EtaTask.h EtaTask.cxx");
plugin->SetDefaultOutputs(kTRUE);
//plugin->SetDefaultOutputs(kFALSE);
//plugin->SetOutputFiles("eta.output.ESD.root EventStat_temp.root");
// Optionally define the files to be archived.
// plugin->SetOutputArchive("log_archive.zip:stdout,stderr@ALICE::NIHAM::File root_archive.zip:*.root@ALICE::NIHAM::File");
// plugin->SetOutputArchive("log_archive.zip:stdout,stderr");
// Optionally set a name for the generated analysis macro (default MyAnalysis.C)
plugin->SetAnalysisMacro("EtaAnalysis.C");
plugin->SetExecutable("runEtaAnalysis.sh");
plugin->SetJDLName("EtaAnalysis.jdl");
plugin->SetSplitMaxInputFileNumber(100);
plugin->SetMaxInitFailed(5);
plugin->SetMasterResubmitThreshold(90);
plugin->SetTTL(43200);
plugin->SetInputFormat("xml-single");
plugin->SetPrice(1);
plugin->SetSplitMode("se");
return plugin;
}