mitk::SemanticRelationsDataStorageAccess::DataNodeVector mitk::SemanticRelationsDataStorageAccess::GetAllSpecificImages(const SemanticTypes::CaseID& caseID, const SemanticTypes::ControlPoint& controlPoint, const SemanticTypes::InformationType& informationType) const
{
if (SemanticRelationsInference::InstanceExists(caseID, controlPoint))
{
if (SemanticRelationsInference::InstanceExists(caseID, informationType))
{
// control point exists, information type exists, retrieve all images from the storage
DataNodeVector allImagesOfCase = GetAllImagesOfCase(caseID);
// filter all images to remove the ones with a different control point and information type using a lambda function
auto lambda = [&controlPoint, &informationType, this](DataNode::Pointer imageNode)
{
return (informationType != SemanticRelationsInference::GetInformationTypeOfImage(imageNode))
|| (controlPoint.date != SemanticRelationsInference::GetControlPointOfImage(imageNode).date);
};
allImagesOfCase.erase(std::remove_if(allImagesOfCase.begin(), allImagesOfCase.end(), lambda), allImagesOfCase.end());
return allImagesOfCase;
}
else
{
mitkThrowException(SemanticRelationException) << "Could not find an existing information type for the given caseID " << caseID << " and information type " << informationType;
}
}
else
{
mitkThrowException(SemanticRelationException) << "Could not find an existing control point for the given caseID " << caseID << " and control point " << controlPoint.UID;
}
}
mitk::SemanticRelationsDataStorageAccess::DataNodeVector mitk::SemanticRelationsDataStorageAccess::GetAllSegmentationsOfLesion(const SemanticTypes::CaseID& caseID, const SemanticTypes::Lesion& lesion) const
{
if (SemanticRelationsInference::InstanceExists(caseID, lesion))
{
// lesion exists, retrieve all case segmentations from the storage
DataNodeVector allSegmentationsOfLesion = GetAllSegmentationsOfCase(caseID);
// filter all segmentations: check for semantic relation with the given lesion using a lambda function
auto lambda = [&lesion, this](DataNode::Pointer segmentation)
{
try
{
SemanticTypes::Lesion representedLesion = SemanticRelationsInference::GetLesionOfSegmentation(segmentation);
return lesion.UID != representedLesion.UID;
}
catch (const SemanticRelationException&)
{
return true;
}
};
allSegmentationsOfLesion.erase(std::remove_if(allSegmentationsOfLesion.begin(), allSegmentationsOfLesion.end(), lambda), allSegmentationsOfLesion.end());
return allSegmentationsOfLesion;
}
else
{
mitkThrowException(SemanticRelationException) << "Could not find an existing lesion instance for the given caseID " << caseID << " and lesion " << lesion.UID << ".";
}
}
mitk::SemanticRelationsDataStorageAccess::DataNodeVector mitk::SemanticRelationsDataStorageAccess::GetAllImagesOfLesion(const SemanticTypes::CaseID& caseID, const SemanticTypes::Lesion& lesion) const
{
if (m_DataStorage.IsExpired())
{
mitkThrowException(SemanticRelationException) << "Not a valid data storage.";
}
DataNodeVector allImagesOfLesion;
// 1. get all segmentations that define the lesion
// 2. retrieve the parent node (source) of the found segmentation node
DataNodeVector allSegmentationsOfLesion = GetAllSegmentationsOfLesion(caseID, lesion);
for (const auto& segmentationNode : allSegmentationsOfLesion)
{
// get parent node of the current segmentation node with the node predicate
DataStorage::SetOfObjects::ConstPointer parentNodes = m_DataStorage.Lock()->GetSources(segmentationNode, NodePredicates::GetImagePredicate(), false);
for (auto it = parentNodes->Begin(); it != parentNodes->End(); ++it)
{
DataNode::Pointer dataNode = it->Value();
allImagesOfLesion.push_back(it->Value());
}
}
std::sort(allImagesOfLesion.begin(), allImagesOfLesion.end());
allImagesOfLesion.erase(std::unique(allImagesOfLesion.begin(), allImagesOfLesion.end()), allImagesOfLesion.end());
return allImagesOfLesion;
}
