struct raToStructReader *edwFastqFileRaReader() /* Make a raToStructReader for edwFastqFile */ { static char *fields[] = { "sampleCount", "basesInSample", "readCount", "baseCount", "readSizeMean", "readSizeStd", "readSizeMin", "readSizeMax", "qualMean", "qualStd", "qualMin", "qualMax", "qualType", "qualZero", "atRatio", "aRatio", "cRatio", "gRatio", "tRatio", "nRatio", "qualPos", "aAtPos", "cAtPos", "gAtPos", "tAtPos", "nAtPos", }; static char *requiredFields[] = { "readCount", "baseCount", "readSizeMean", "readSizeStd", "readSizeMin", "readSizeMax", "qualMean", "qualStd", "qualMin", "qualMax", "qualType", "qualZero", "atRatio", "aRatio", "cRatio", "gRatio", "tRatio", "nRatio", "qualPos", "aAtPos", "cAtPos", "gAtPos", "tAtPos", "nAtPos", }; return raToStructReaderNew("edwFastqFile", ArraySize(fields), fields, ArraySize(requiredFields), requiredFields); }
struct raToStructReader *cdwQaPairedEndFastqRaReader() /* Make a raToStructReader for cdwQaPairedEndFastq */ { static char *fields[] = { "fileId1", "concordance", "distanceMean", "distanceStd", "distanceMin", "distanceMax", }; static char *requiredFields[] = { "concordance", "distanceMean", "distanceStd", "distanceMin", "distanceMax", }; return raToStructReaderNew("cdwQaPairedEndFastq", ArraySize(fields), fields, ArraySize(requiredFields), requiredFields); }
struct raToStructReader *edwQaWigSpotRaReader() /* Make a raToStructReader for edwQaWigSpot */ { static char *fields[] = { "spotRatio", "enrichment", "basesInGenome", "basesInSpots", "sumSignal", "spotSumSignal", }; static char *requiredFields[] = { "spotRatio", "enrichment", "basesInGenome", "basesInSpots", "sumSignal", "spotSumSignal", }; return raToStructReaderNew("edwQaWigSpot", ArraySize(fields), fields, ArraySize(requiredFields), requiredFields); }
struct raToStructReader *cdwBamFileRaReader() /* Make a raToStructReader for cdwBamFile */ { static char *fields[] = { "isPaired", "isSortedByTarget", "readCount", "readBaseCount", "mappedCount", "uniqueMappedCount", "readSizeMean", "readSizeStd", "readSizeMin", "readSizeMax", "u4mReadCount", "u4mUniquePos", "u4mUniqueRatio", "targetBaseCount", "targetSeqCount", }; static char *requiredFields[] = { "isPaired", "isSortedByTarget", "readCount", "readBaseCount", "mappedCount", "uniqueMappedCount", "readSizeMean", "readSizeStd", "readSizeMin", "readSizeMax", "u4mReadCount", "u4mUniquePos", "u4mUniqueRatio", "targetBaseCount", "targetSeqCount", }; return raToStructReaderNew("cdwBamFile", ArraySize(fields), fields, ArraySize(requiredFields), requiredFields); }