C++ (Cpp) setExplicitBedOutput示例

示例#1

文件： ContextMerge.cpp 项目： Yixf-Self/bedtools2

ContextMerge::ContextMerge()
{
	setSortedInput(true);
	setUseMergedIntervals(true);
	setColumnOpsMethods(true);
	setExplicitBedOutput(true);

	//merge has no default columnOps the way map does, so we'll need to clear those.
	_keyListOps->setColumns("");
	_keyListOps->setOperations("");

}

示例#2

文件： ContextGroupBy.cpp 项目： LukeGoodsell/bedtools2

ContextGroupBy::ContextGroupBy()
: _printFullCols(false),
  _ignoreCase(false)
{
	setSortedInput(true);
	_noEnforceCoordSort = true;
	setColumnOpsMethods(true);
	setExplicitBedOutput(true);

	//For columnOps, groupBy has default operation sum but no default column,
	///so we have to clear that.
	//
	_keyListOps->setColumns("");

}

示例#3

bool ContextBase::handle_bed()
{
	setExplicitBedOutput(true);
	markUsed(_i - _skipFirstArgs);
	return true;
}