void set_vcf_record_chromosome(char* chromosome, int length, vcf_record_t* record) {
assert(chromosome);
assert(record);
if (starts_with_n(chromosome, "chrom", 5)) {
record->chromosome = chromosome + 5;
record->chromosome_len = length - 5;
} else if (starts_with_n(chromosome, "chr", 3)) {
record->chromosome = chromosome + 3;
record->chromosome_len = length - 3;
} else {
record->chromosome = chromosome;
record->chromosome_len = length;
}
// LOG_DEBUG_F("set chromosome: '%.*s'\n", record->chromosome_len, record->chromosome);
}
/*!
* \brief Check if string has prefix
* (case sensitive)
*
* \param string String
* \param prefix Prefix
*
* \return Whether the string starts with the prefix
*/
bool starts_with(const std::string &string, const std::string &prefix)
{
return starts_with_n(string.c_str(), string.size(),
prefix.c_str(), prefix.size());
}
/*!
* \brief Check if string has prefix
* (case sensitive)
*
* \param string String
* \param prefix Prefix
*
* \return Whether the string starts with the prefix
*/
bool starts_with(const std::string &string, const char *prefix)
{
return starts_with_n(string.c_str(), string.size(), prefix, strlen(prefix));
}
/*!
* \brief Check if string has prefix
* (case sensitive)
*
* \param string String
* \param prefix Prefix
*
* \return Whether the string starts with the prefix
*/
bool starts_with(const char *string, const std::string &prefix)
{
return starts_with_n(string, strlen(string), prefix.c_str(), prefix.size());
}
/*!
* \brief Check if string has prefix
* (case sensitive)
*
* \param string String
* \param prefix Prefix
*
* \return Whether the string starts with the prefix
*/
bool starts_with(const char *string, const char *prefix)
{
return starts_with_n(string, strlen(string), prefix, strlen(prefix));
}