Beispiel #1
0
void IsisMain() {
  Process p;

  // Get the list of names of input CCD cubes to stitch together
  FileList flist;
  UserInterface &ui = Application::GetUserInterface();
  flist.Read(ui.GetFilename("FROMLIST"));
  if (flist.size() < 1) {
    string msg = "The list file[" + ui.GetFilename("FROMLIST") +
    " does not contain any filenames";
    throw iException::Message(iException::User,msg,_FILEINFO_);
  }

  string projection("Equirectangular");
  if(ui.WasEntered("MAP")) {
      Pvl mapfile(ui.GetFilename("MAP"));
      projection = (string) mapfile.FindGroup("Mapping")["ProjectionName"];
  }

  if(ui.WasEntered("PROJECTION")) {
      projection = ui.GetString("PROJECTION");
  }

  // Gather other user inputs to projection
  string lattype = ui.GetString("LATTYPE");
  string londir  = ui.GetString("LONDIR");
  string londom  = ui.GetString("LONDOM");
  int digits = ui.GetInteger("PRECISION");

  // Fix them for mapping group
  lattype = (lattype == "PLANETOCENTRIC") ? "Planetocentric" : "Planetographic";
  londir = (londir == "POSITIVEEAST") ? "PositiveEast" : "PositiveWest";

  Progress prog;
  prog.SetMaximumSteps(flist.size());
  prog.CheckStatus();

  Statistics scaleStat;
  Statistics longitudeStat;
  Statistics latitudeStat;
  Statistics equiRadStat;
  Statistics poleRadStat;
  PvlObject fileset("FileSet");

  // Save major equitorial and polar radii for last occuring
  double eqRad; 
  double eq2Rad; 
  double poleRad;

  string target("Unknown");
  for (unsigned int i = 0 ; i < flist.size() ; i++) {
    // Set the input image, get the camera model, and a basic mapping
    // group
    Cube cube;
    cube.Open(flist[i]);

    int lines = cube.Lines();
    int samples = cube.Samples();


    PvlObject fmap("File");
    fmap += PvlKeyword("Name",flist[i]);
    fmap += PvlKeyword("Lines", lines);
    fmap += PvlKeyword("Samples", samples);

    Camera *cam = cube.Camera();
    Pvl mapping;
    cam->BasicMapping(mapping);
    PvlGroup &mapgrp = mapping.FindGroup("Mapping");
    mapgrp.AddKeyword(PvlKeyword("ProjectionName",projection),Pvl::Replace);    
    mapgrp.AddKeyword(PvlKeyword("LatitudeType",lattype),Pvl::Replace);    
    mapgrp.AddKeyword(PvlKeyword("LongitudeDirection",londir),Pvl::Replace);    
    mapgrp.AddKeyword(PvlKeyword("LongitudeDomain",londom),Pvl::Replace);    

    // Get the radii
    double radii[3];
    cam->Radii(radii);

    eqRad   = radii[0] * 1000.0;
    eq2Rad  = radii[1] * 1000.0;
    poleRad = radii[2] * 1000.0;

    target = cam->Target();
    equiRadStat.AddData(&eqRad, 1);
    poleRadStat.AddData(&poleRad, 1);

    // Get resolution
    double lowres = cam->LowestImageResolution();
    double hires = cam->HighestImageResolution();
    scaleStat.AddData(&lowres, 1);
    scaleStat.AddData(&hires, 1);

    double pixres = (lowres+hires)/2.0;
    double scale = Scale(pixres, poleRad, eqRad);
    mapgrp.AddKeyword(PvlKeyword("PixelResolution",pixres),Pvl::Replace);
    mapgrp.AddKeyword(PvlKeyword("Scale",scale,"pixels/degree"),Pvl::Replace);
    mapgrp += PvlKeyword("MinPixelResolution",lowres,"meters");
    mapgrp += PvlKeyword("MaxPixelResolution",hires,"meters");

    // Get the universal ground range
    double minlat,maxlat,minlon,maxlon;
    cam->GroundRange(minlat,maxlat,minlon,maxlon,mapping);
    mapgrp.AddKeyword(PvlKeyword("MinimumLatitude",minlat),Pvl::Replace);
    mapgrp.AddKeyword(PvlKeyword("MaximumLatitude",maxlat),Pvl::Replace);
    mapgrp.AddKeyword(PvlKeyword("MinimumLongitude",minlon),Pvl::Replace);
    mapgrp.AddKeyword(PvlKeyword("MaximumLongitude",maxlon),Pvl::Replace);

    fmap.AddGroup(mapgrp);
    fileset.AddObject(fmap);

    longitudeStat.AddData(&minlon, 1);
    longitudeStat.AddData(&maxlon, 1);
    latitudeStat.AddData(&minlat, 1);
    latitudeStat.AddData(&maxlat, 1);

    p.ClearInputCubes();
    prog.CheckStatus();
  }

//  Construct the output mapping group with statistics
  PvlGroup mapping("Mapping");
  double avgPixRes((scaleStat.Minimum()+scaleStat.Maximum())/2.0);
  double avgLat((latitudeStat.Minimum()+latitudeStat.Maximum())/2.0);
  double avgLon((longitudeStat.Minimum()+longitudeStat.Maximum())/2.0);
  double avgEqRad((equiRadStat.Minimum()+equiRadStat.Maximum())/2.0);
  double avgPoleRad((poleRadStat.Minimum()+poleRadStat.Maximum())/2.0);
  double scale  = Scale(avgPixRes, avgPoleRad, avgEqRad);

  mapping += PvlKeyword("ProjectionName",projection);
  mapping += PvlKeyword("TargetName", target);
  mapping += PvlKeyword("EquatorialRadius",eqRad,"meters");
  mapping += PvlKeyword("PolarRadius",poleRad,"meters");
  mapping += PvlKeyword("LatitudeType",lattype);
  mapping += PvlKeyword("LongitudeDirection",londir);
  mapping += PvlKeyword("LongitudeDomain",londom);
  mapping += PvlKeyword("PixelResolution", SetRound(avgPixRes, digits), "meters/pixel");
  mapping += PvlKeyword("Scale", SetRound(scale, digits), "pixels/degree");
  mapping += PvlKeyword("MinPixelResolution",scaleStat.Minimum(),"meters");
  mapping += PvlKeyword("MaxPixelResolution",scaleStat.Maximum(),"meters");
  mapping += PvlKeyword("CenterLongitude", SetRound(avgLon,digits));
  mapping += PvlKeyword("CenterLatitude",  SetRound(avgLat,digits));
  mapping += PvlKeyword("MinimumLatitude", MAX(SetFloor(latitudeStat.Minimum(),digits), -90.0));
  mapping += PvlKeyword("MaximumLatitude", MIN(SetCeil(latitudeStat.Maximum(),digits), 90.0));
  mapping += PvlKeyword("MinimumLongitude",MAX(SetFloor(longitudeStat.Minimum(),digits), -180.0));
  mapping += PvlKeyword("MaximumLongitude",MIN(SetCeil(longitudeStat.Maximum(),digits), 360.0));

  PvlKeyword clat("PreciseCenterLongitude", avgLon);
  clat.AddComment("Actual Parameters without precision applied");
  mapping += clat;
  mapping += PvlKeyword("PreciseCenterLatitude",  avgLat);
  mapping += PvlKeyword("PreciseMinimumLatitude", latitudeStat.Minimum());
  mapping += PvlKeyword("PreciseMaximumLatitude", latitudeStat.Maximum());
  mapping += PvlKeyword("PreciseMinimumLongitude",longitudeStat.Minimum());
  mapping += PvlKeyword("PreciseMaximumLongitude",longitudeStat.Maximum());

  
  Application::GuiLog(mapping);

  // Write the output file if requested
  if (ui.WasEntered("TO")) {
    Pvl temp;
    temp.AddGroup(mapping);
    temp.Write(ui.GetFilename("TO","map"));
  }

  if (ui.WasEntered("LOG")) {
    Pvl temp;
    temp.AddObject(fileset);
    temp.Write(ui.GetFilename("LOG","log"));
  }

  p.EndProcess();
}
Beispiel #2
0
/** The ISIS smtk main application */
void IsisMain() {
  UserInterface &ui = Application::GetUserInterface();

  // Open the first cube.  It is the left hand image.
  Cube lhImage;
  CubeAttributeInput &attLeft = ui.GetInputAttribute("FROM");
  vector<QString> bandLeft = attLeft.bands();
  lhImage.setVirtualBands(bandLeft);
  lhImage.open(ui.GetFileName("FROM"),"r");

  // Open the second cube, it is geomertricallty altered.  We will be matching the
  // first to this one by attempting to compute a sample/line offsets
  Cube rhImage;
  CubeAttributeInput &attRight = ui.GetInputAttribute("MATCH");
  vector<QString> bandRight = attRight.bands();
  rhImage.setVirtualBands(bandRight);
  rhImage.open(ui.GetFileName("MATCH"),"r");

  // Ensure only single bands
  if (lhImage.bandCount() != 1 || rhImage.bandCount() != 1) {
    QString msg = "Input Cubes must have only one band!";
    throw IException(IException::User,msg,_FILEINFO_);
  }

  //  Both images must have a Camera and can also have a Projection.  We will
  //  only deal with a Camera, however as a projected, non-mosaicked image
  //  uses a Projection internal to the Camera object.
  Camera *lhCamera = NULL;
  Camera *rhCamera = NULL;
  try {
    lhCamera = lhImage.camera();
    rhCamera = rhImage.camera();
  }
  catch (IException &ie) {
    QString msg = "Both input images must have a camera";
    throw IException(ie, IException::User, msg, _FILEINFO_);
  }

  //  Since we are generating a DEM, we must turn off any existing
  //  DEM that may have been initialized with spiceinit.
  lhCamera->IgnoreElevationModel(true);
  rhCamera->IgnoreElevationModel(true);

  // Get serial number
  QString serialLeft = SerialNumber::Compose(lhImage, true);
  QString serialRight = SerialNumber::Compose(rhImage, true);

//  This still precludes band to band registrations.
  if (serialLeft == serialRight) {
    QString sLeft = FileName(lhImage.fileName()).name();
    QString sRight = FileName(rhImage.fileName()).name();
    if (sLeft == sRight) {
      QString msg = "Cube Serial Numbers must be unique - FROM=" + serialLeft +
                   ", MATCH=" + serialRight;
      throw IException(IException::User,msg,_FILEINFO_);
    }
    serialLeft = sLeft;
    serialRight = sRight;
  }

  Progress prog;
  prog.SetText("Finding Initial Seeds");

  int nl = lhImage.lineCount();
  int ns = lhImage.sampleCount();
  BigInt numAttemptedInitialPoints = 0;

  //  Declare Gruen matcher
  SmtkMatcher matcher(ui.GetFileName("REGDEF"), &lhImage, &rhImage);

  // Get line/sample linc/sinc parameters
  int space   = ui.GetInteger("SPACE");
  int linc (space), sinc(space);

  // Do we have a seed points from a control net file?
  bool useseed = ui.WasEntered("CNET");

  // Base points on an input cnet
  SmtkQStack gstack;
  double lastEigen(0.0);
  if (useseed) {
    ControlNet cnet(ui.GetFileName("CNET"));
    prog.SetMaximumSteps(cnet.GetNumPoints());
    prog.CheckStatus();

    gstack.reserve(cnet.GetNumPoints());

    for (int cpIndex = 0; cpIndex < cnet.GetNumPoints(); cpIndex ++) {
      ControlPoint *cp = cnet.GetPoint(cpIndex);

      if (!cp->IsIgnored()) {
        ControlMeasure *cmLeft(0), *cmRight(0);
        for(int cmIndex = 0; cmIndex < cp->GetNumMeasures(); cmIndex ++) {
          ControlMeasure *cm = cp->GetMeasure(cmIndex);
          if (!cm->IsIgnored()) {
            if (cm->GetCubeSerialNumber() == serialLeft)
              cmLeft = cp->GetMeasure(cmIndex);
            if (cm->GetCubeSerialNumber() == serialRight)
              cmRight = cp->GetMeasure(cmIndex);
          }
        }

        //  If we have both left and right images in the control point, save it
        if ( (cmLeft != 0) && (cmRight != 0) ) {
          Coordinate left = Coordinate(cmLeft->GetLine(), cmLeft->GetSample());
          Coordinate right = Coordinate(cmRight->GetLine(), cmRight->GetSample());
          SmtkPoint spnt = matcher.Create(left, right);

          // Insert the point (unregistered)
          if ( spnt.isValid() ) {
            int line = (int) cmLeft->GetLine();
            int samp = (int) cmLeft->GetSample();
            matcher.isValid(spnt);
            gstack.insert(qMakePair(line, samp), spnt);
            lastEigen = spnt.GoodnessOfFit();
          }
        }
      }

      prog.CheckStatus();
    }
  }
  else {
  // We want to create a grid of control points that is N rows by M columns.

    int rows = (lhImage.lineCount() + linc - 1)/linc;
    int cols = (lhImage.sampleCount() + sinc - 1)/sinc;

    prog.SetMaximumSteps(rows * cols);
    prog.CheckStatus();

    // First pass stack and eigen value statistics
    SmtkQStack fpass;
    fpass.reserve(rows * cols);
    Statistics temp_mev;

    // Loop through grid of points and get statistics to compute
    // initial set of points
    for (int line = linc / 2 + 1; line < nl; line += linc) {
      for (int samp = sinc / 2 + 1 ; samp < ns; samp += sinc) {
        numAttemptedInitialPoints ++;
        SmtkPoint spnt = matcher.Register(Coordinate(line,samp));
        if ( spnt.isValid() ) {
          matcher.isValid(spnt);
          fpass.insert(qMakePair(line, samp), spnt);
          temp_mev.AddData(spnt.GoodnessOfFit());
        }
        prog.CheckStatus();
      }
    }

    //  Now select a subset of fpass points as the seed points
    cout << "Number of Potential Seed Points: " << fpass.size() << "\n";
    cout << "Min / Max Eigenvalues Matched: " << temp_mev.Minimum() << ", "
         << temp_mev.Maximum() << "\n";

    // How many seed points are requested
    double nseed = ui.GetDouble("NSEED");
    int inseed;
    if (nseed >= 1.0) inseed = (int) nseed;
    else if (nseed > 0.0) inseed = (int) (nseed * (double) (fpass.size()));
    else inseed = (int) ((double) (fpass.size()) * 0.05);

    double seedsample = ui.GetDouble("SEEDSAMPLE");

    // Generate a new stack
    gstack.reserve(inseed);
    while ((gstack.size() < inseed) && (!fpass.isEmpty() )) {
      SmtkQStack::iterator bestm;
      if (seedsample <= 0.0) {
        bestm = matcher.FindSmallestEV(fpass);
      }
      else {
        bestm = matcher.FindExpDistEV(fpass, seedsample, temp_mev.Minimum(),
                                      temp_mev.Maximum());
      }

      //  Add point to stack
      if (bestm != fpass.end()) {
        Coordinate right = bestm.value().getRight();
        matcher.isValid(bestm.value());
        gstack.insert(bestm.key(), bestm.value());
        lastEigen = bestm.value().GoodnessOfFit();
        fpass.erase(bestm);
      }
    }

    // If a user wants to see the seed network, write it out here
    if (ui.WasEntered("OSEEDNET")) {
      WriteCnet(ui.GetFileName("OSEEDNET"), gstack,
                lhCamera->target()->name(), serialLeft, serialRight);
    }

  }

  ///////////////////////////////////////////////////////////////////////
  // All done with seed points.  Sanity check ensures we actually found
  // some.
  ///////////////////////////////////////////////////////////////////////
  if (gstack.size() <= 0) {
    QString msg = "No seed points found - may need to check Gruen parameters.";
    throw IException(IException::User, msg, _FILEINFO_);
  }

  //  Report seed point status
  if (!useseed) {
    cout << "Number of Seed Points used: " << gstack.size() << "\n";
    cout << "EV of last Seed Point:      " << lastEigen << "\n";
  }
  else {
    cout << "Number of Manual Seed Points:   " << gstack.size() << "\n";
  }

  // Use seed points (in stack) to grow
  SmtkQStack bmf;
  bmf.reserve(gstack.size());  // Probably need much more but for starters...

  BigInt numOrigPoints = gstack.size();
  BigInt passpix2 = 0;

  int subcbox = ui.GetInteger("SUBCBOX");
  int halfBox((subcbox-1)/2);
  while (!gstack.isEmpty()) {

    SmtkQStackIter cstack = matcher.FindSmallestEV(gstack);

    // Print number on stack
    if ((gstack.size() % 1000) == 0) {
      cout << "Number on Stack: " << gstack.size()
           << ". " << cstack.value().GoodnessOfFit() << "\n";
    }

    // Test to see if already determined
    SmtkQStackIter bmfPt = bmf.find(cstack.key());
    if (bmfPt == bmf.end()) {
      // Its not in the final stack, process it

      //  Retrieve the point
      SmtkPoint spnt = cstack.value();
      //  Register if its not already registered
      if (!spnt.isRegistered()) {
        spnt = matcher.Register(spnt, spnt.getAffine());
      }

      // Still must check for validity if the point was just registered,
      // otherwise should be good
      if ( spnt.isValid() ) {
        passpix2++;
        bmf.insert(cstack.key(), spnt);  // inserts (0,0) offset excluded below
        int line   = cstack.key().first;
        int sample = cstack.key().second;

        //  Determine match points
        double eigen(spnt.GoodnessOfFit());
        for (int sampBox = -halfBox ; sampBox <= halfBox ; sampBox++ ) {
          int csamp = sample + sampBox;
          for (int lineBox = -halfBox ; lineBox <= halfBox ; lineBox++) {
            int cline = line + lineBox;
            if ( !( (sampBox == 0) && (lineBox == 0)) ) {// Already added above
              SmtkQPair dupPair(cline, csamp);
              SmtkQStackIter temp = bmf.find(dupPair);
              SmtkPoint bmfpnt;
              if (temp != bmf.end()) {
                if (temp.value().GoodnessOfFit() > eigen) {
                  // Create cloned point with better fit
                  bmfpnt = matcher.Clone(spnt, Coordinate(cline,csamp));
                }
              }
              else {  // ISIS2 is BMF(SAMP,LINE,7) .EQ VALID_MAX4)
                // Clone new point for insert
                bmfpnt = matcher.Clone(spnt, Coordinate(cline,csamp));
              }

              //  Add if good point
              if (bmfpnt.isValid()) {
                bmf.insert(dupPair, bmfpnt);
              }
            }
          }
        }

        // Grow stack with spacing adding info to stack
        for (int i = -1 ; i <= 1 ; i ++) {  // Sample
          for (int j = -1 ; j <= 1 ; j ++) {  // Line
            // Don't re-add the original sample, line
            if ( !((i == 0) && (j == 0)) ) {
              //  Grow based upon spacing
              double ssamp = sample + (i * space);
              double sline = line   + (j * space);
              Coordinate pnt = Coordinate(sline, ssamp);
              SmtkPoint gpnt = matcher.Clone(spnt, pnt);

              if ( gpnt.isValid() ) {
                SmtkQPair growpt((int) sline, (int) ssamp);

                // double check we don't have a finalized result at this position
                SmtkQStackIter temp = bmf.find(growpt);
                if(temp == bmf.end()) {
                  gstack.insert(growpt, gpnt);
                }
              }
            }
          }
        }
      }
    }

    // Remove the current point from the grow stack (hole)
    gstack.erase(cstack);
  }

/////////////////////////////////////////////////////////////////////////
// All done with creating points.  Perform output options.
/////////////////////////////////////////////////////////////////////////

  // If a TO parameter was specified, create DEM with errors
  if (ui.WasEntered("TO")) {
    //  Create the output DEM
    cout << "\nCreating output DEM from " << bmf.size() << " points.\n";
    Process  p;
    Cube *icube = p.SetInputCube("FROM");
    Cube *ocube = p.SetOutputCube("TO", icube->sampleCount(),
                                  icube->lineCount(), 3);
    p.ClearInputCubes();

    int boxsize = ui.GetInteger("BOXSIZE");
    double plotdist = ui.GetDouble("PLOTDIST");

    TileManager dem(*ocube), eigen(*ocube), stErr(*ocube);
    dem.SetTile(1, 1);      //  DEM Data/elevation
    stErr.SetTile(1, 2);    //  Error in stereo computation
    eigen.SetTile(1, 3);    //  Eigenvalue of the solution

    int nBTiles(eigen.Tiles()/3);  // Total tiles / 3 bands

    prog.SetText("Creating DEM");
    prog.SetMaximumSteps(nBTiles);
    prog.CheckStatus();

    Statistics stAng;
    while ( !eigen.end() ) {   // Must use the last band for this!!
      PointPlot tm = for_each(bmf.begin(), bmf.end(), PointPlot(dem, plotdist));
      tm.FillPoints(*lhCamera, *rhCamera, boxsize, dem, stErr, eigen, &stAng);

      ocube->write(dem);
      ocube->write(stErr);
      ocube->write(eigen);

      dem.next();
      stErr.next();
      eigen.next();

      prog.CheckStatus();
    }

    //  Report Stereo separation angles
    PvlGroup stresultsPvl("StereoSeparationAngle");
    stresultsPvl += PvlKeyword("Minimum", toString(stAng.Minimum()), "deg");
    stresultsPvl += PvlKeyword("Average", toString(stAng.Average()), "deg");
    stresultsPvl += PvlKeyword("Maximum", toString(stAng.Maximum()), "deg");
    stresultsPvl += PvlKeyword("StandardDeviation", toString(stAng.StandardDeviation()), "deg");
    Application::Log(stresultsPvl);

    // Update the label with BandBin keywords
    PvlKeyword filter("FilterName", "Elevation", "meters");
    filter.addValue("ElevationError", "meters");
    filter.addValue("GoodnessOfFit", "unitless");
    PvlKeyword center("Center", "1.0");
    center.addValue("1.0");
    center.addValue("1.0");

    PvlGroup &bandbin = ocube->label()->findGroup("BandBin", PvlObject::Traverse);
    bandbin.addKeyword(filter, PvlContainer::Replace);
    bandbin.addKeyword(center, PvlContainer::Replace);
    center.setName("Width");
    bandbin.addKeyword(center, PvlContainer::Replace);


    p.EndProcess();
  }

  // If a cnet file was entered, write the ControlNet pvl to the file
  if (ui.WasEntered("ONET")) {
    WriteCnet(ui.GetFileName("ONET"), bmf, lhCamera->target()->name(), serialLeft,
              serialRight);
  }

  // Create output data
  PvlGroup totalPointsPvl("Totals");
  totalPointsPvl += PvlKeyword("AttemptedPoints", toString(numAttemptedInitialPoints));
  totalPointsPvl += PvlKeyword("InitialSuccesses", toString(numOrigPoints));
  totalPointsPvl += PvlKeyword("GrowSuccesses", toString(passpix2));
  totalPointsPvl += PvlKeyword("ResultingPoints", toString(bmf.size()));

  Application::Log(totalPointsPvl);

  Pvl arPvl = matcher.RegistrationStatistics();
  PvlGroup smtkresultsPvl("SmtkResults");
  smtkresultsPvl += PvlKeyword("SpiceOffImage", toString(matcher.OffImageErrorCount()));
  smtkresultsPvl += PvlKeyword("SpiceDistanceError", toString(matcher.SpiceErrorCount()));
  arPvl.addGroup(smtkresultsPvl);

  for(int i = 0; i < arPvl.groups(); i++) {
    Application::Log(arPvl.group(i));
  }

  // add the auto registration information to print.prt
  PvlGroup autoRegTemplate = matcher.RegTemplate();
  Application::Log(autoRegTemplate);

  // Don't need the cubes opened anymore
  lhImage.close();
  rhImage.close();
}