const Vector2D Curl(const Vector2D &v) { Vector2D result; #ifdef CHECK int msg_pos = msg_stack.push("Curl( Vector2D )"); #endif // Get covariant components of v Vector2D vco = v; vco.to_covariant(); // get components (curl(v))^j result.x = (DDY(vco.z) - DDZ(vco.y))/J; result.y = (DDZ(vco.x) - DDX(vco.z))/J; result.z = (DDX(vco.y) - DDY(vco.x))/J; if(ShiftXderivs) { result.z -= ShiftTorsion*vco.z / J; } result.covariant = false; // result is contravariant #ifdef CHECK msg_stack.pop(msg_pos); #endif return result; }
bool Datafile::write(const string &filename, bool append) { if(!enabled) return true; // Just pretend it worked // Record starting time real tstart = MPI_Wtime(); if(!file->openw(filename, append)) return false; if(!file->is_valid()) return false; file->setRecord(-1); // Latest record // Write integers for(std::vector< VarStr<int> >::iterator it = int_arr.begin(); it != int_arr.end(); it++) { if(it->grow) { file->write_rec(it->ptr, it->name); }else { file->write(it->ptr, it->name); } } // Write reals for(std::vector< VarStr<real> >::iterator it = real_arr.begin(); it != real_arr.end(); it++) { if(it->grow) { file->write_rec(it->ptr, it->name); }else { file->write(it->ptr, it->name); } } // Write 2D fields for(std::vector< VarStr<Field2D> >::iterator it = f2d_arr.begin(); it != f2d_arr.end(); it++) { write_f2d(it->name, it->ptr, it->grow); } // Write 3D fields for(std::vector< VarStr<Field3D> >::iterator it = f3d_arr.begin(); it != f3d_arr.end(); it++) { write_f3d(it->name, it->ptr, it->grow); } // 2D vectors for(std::vector< VarStr<Vector2D> >::iterator it = v2d_arr.begin(); it != v2d_arr.end(); it++) { if(it->covar) { // Writing covariant vector Vector2D v = *(it->ptr); v.to_covariant(); write_f2d(it->name+string("_x"), &(v.x), it->grow); write_f2d(it->name+string("_y"), &(v.y), it->grow); write_f2d(it->name+string("_z"), &(v.z), it->grow); }else { // Writing contravariant vector Vector2D v = *(it->ptr); v.to_contravariant(); write_f2d(it->name+string("x"), &(v.x), it->grow); write_f2d(it->name+string("y"), &(v.y), it->grow); write_f2d(it->name+string("z"), &(v.z), it->grow); } } // 3D vectors for(std::vector< VarStr<Vector3D> >::iterator it = v3d_arr.begin(); it != v3d_arr.end(); it++) { if(it->covar) { // Writing covariant vector Vector3D v = *(it->ptr); v.to_covariant(); write_f3d(it->name+string("_x"), &(v.x), it->grow); write_f3d(it->name+string("_y"), &(v.y), it->grow); write_f3d(it->name+string("_z"), &(v.z), it->grow); }else { // Writing contravariant vector Vector3D v = *(it->ptr); v.to_contravariant(); write_f3d(it->name+string("x"), &(v.x), it->grow); write_f3d(it->name+string("y"), &(v.y), it->grow); write_f3d(it->name+string("z"), &(v.z), it->grow); } } file->close(); wtime += MPI_Wtime() - tstart; return true; }