C++ (Cpp) MassSpectrum::getSegment Examples

Example #1

File: dataprochandler.cpp Project: hermixy/qtplatz

bool
DataprocHandler::doCentroid( adcontrols::MSPeakInfo& pkInfo
                             , adcontrols::MassSpectrum& res
                             , const adcontrols::MassSpectrum& profile
                             , const adcontrols::CentroidMethod& m )
{
    adcontrols::CentroidProcess peak_detector;
    bool result = false;
    
    res.clone( profile, false );

    if ( peak_detector( m, profile ) ) {
        result = peak_detector.getCentroidSpectrum( res );
        pkInfo = peak_detector.getPeakInfo();
    }

    if ( profile.numSegments() > 0 ) {
        for ( size_t fcn = 0; fcn < profile.numSegments(); ++fcn ) {
            adcontrols::MassSpectrum centroid;
            result |= peak_detector( profile.getSegment( fcn ) );
            pkInfo.addSegment( peak_detector.getPeakInfo() );
            peak_detector.getCentroidSpectrum( centroid );
            res.addSegment( centroid );
        }
    }
    return result;
}

Example #2

bool
MSChromatogramExtractor::impl::doCentroid(adcontrols::MassSpectrum& centroid
                                          , const adcontrols::MassSpectrum& profile
                                          , const adcontrols::CentroidMethod& m )
{
    adcontrols::CentroidProcess peak_detector;
    bool result = false;
    
    centroid.clone( profile, false );
    
    if ( peak_detector( m, profile ) ) {
        result = peak_detector.getCentroidSpectrum( centroid );
        // pkInfo = peak_detector.getPeakInfo();
    }
    
    if ( profile.numSegments() > 0 ) {
        for ( size_t fcn = 0; fcn < profile.numSegments(); ++fcn ) {
            auto temp = std::make_shared< adcontrols::MassSpectrum >();
            result |= peak_detector( profile.getSegment( fcn ) );
            // pkInfo.addSegment( peak_detector.getPeakInfo() );
            peak_detector.getCentroidSpectrum( *temp );
            centroid <<  std::move( temp );
        }
    }
    return result;
}

Example #3

bool
QuanSampleProcessor::doCentroid( adcontrols::MSPeakInfo& pkInfo
                                 , adcontrols::MassSpectrum& res
                                 , const adcontrols::MassSpectrum& profile
                                 , const adcontrols::CentroidMethod& m )
{
    adcontrols::CentroidProcess peak_detector;
    bool result = false;
    
    res.clone( profile, false );
    
    if ( peak_detector( m, profile ) ) {
        result = peak_detector.getCentroidSpectrum( res );
        pkInfo = peak_detector.getPeakInfo();
    }
    
    if ( profile.numSegments() > 0 ) {
        for ( size_t fcn = 0; fcn < profile.numSegments(); ++fcn ) {
            auto centroid = std::make_shared< adcontrols::MassSpectrum >();
            result |= peak_detector( profile.getSegment( fcn ) );
            pkInfo.addSegment( peak_detector.getPeakInfo() );
            peak_detector.getCentroidSpectrum( *centroid );
            res << std::move( centroid ); 
        }
    }
    return result;
}