END_TEST
START_TEST (test_WriteL3SBML_Reaction_compartment)
{
const char* expected = "<reaction id=\"r\" reversible=\"false\""
" fast=\"true\" compartment=\"c\"/>";
const char* expected1 = "<reaction id=\"r\" reversible=\"false\""
" fast=\"true\"/>";
Reaction *r = D->createModel()->createReaction();
r->setId("r");
r->setReversible(false);
r->setFast(true);
r->setCompartment("c");
char* sbml = r->toSBML();
fail_unless( equals(expected, sbml) );
safe_free(sbml);
r->unsetCompartment();
sbml = r->toSBML();
fail_unless( equals(expected1, sbml) );
safe_free(sbml);
}
END_TEST
START_TEST (test_WriteL3SBML_Reaction_full)
{
const char* expected =
"<reaction id=\"v1\" reversible=\"true\" fast=\"false\">\n"
" <listOfReactants>\n"
" <speciesReference species=\"x0\"/>\n"
" </listOfReactants>\n"
" <listOfProducts>\n"
" <speciesReference species=\"s1\"/>\n"
" </listOfProducts>\n"
" <listOfModifiers>\n"
" <modifierSpeciesReference species=\"m1\"/>\n"
" </listOfModifiers>\n"
" <kineticLaw>\n"
" <math xmlns=\"http://www.w3.org/1998/Math/MathML\">\n"
" <apply>\n"
" <divide/>\n"
" <apply>\n"
" <times/>\n"
" <ci> vm </ci>\n"
" <ci> s1 </ci>\n"
" </apply>\n"
" <apply>\n"
" <plus/>\n"
" <ci> km </ci>\n"
" <ci> s1 </ci>\n"
" </apply>\n"
" </apply>\n"
" </math>\n"
" </kineticLaw>\n"
"</reaction>";
D->createModel();
Reaction* r = D->getModel()->createReaction();
r->setId("v1");
r->setReversible(true);
r->setFast(false);
r->createReactant()->setSpecies("x0");
r->createProduct ()->setSpecies("s1");
r->createModifier()->setSpecies("m1");
r->createKineticLaw()->setFormula("(vm * s1)/(km + s1)");
char* sbml = r->toSBML();
fail_unless( equals(expected, sbml) );
safe_free(sbml);
}